Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:43:29 (637803): wrapper (7.7.26015): starting
18:43:29 (637803): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 18:43:30] Arguments: --nthreads 8
[2025-10-11 18:43:30] Threads: 8
[2025-10-11 18:43:30] Checking for CVMFS
[2025-10-11 18:43:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:43:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:43:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:43:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:43:53] 2.13.1.0 3059378 47994 90184 151599 0 65 39523059 40960000 10426 16776704 0 44749694 99.808 26497461 43424 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 18:43:53] CVMFS is ok
[2025-10-11 18:43:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:43:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:43:53] Further information can be found at the LHC@home message board.
[2025-10-11 18:43:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:43:53] Checking for apptainer binary...
[2025-10-11 18:43:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:43:53] Running /usr/bin/apptainer --version
[2025-10-11 18:43:54] apptainer version 1.4.3-1.el9
[2025-10-11 18:43:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:43:57] c-211-9.aglt2.org
[2025-10-11 18:43:57] apptainer works
[2025-10-11 18:43:57] Set ATHENA_PROC_NUMBER=8
[2025-10-11 18:43:57] Set ATHENA_CORE_NUMBER=8
[2025-10-11 18:43:57] Starting ATLAS job with PandaID=6838632977
[2025-10-11 18:43:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:00:04 (637803): BOINC client no longer exists - exiting
21:00:04 (637803): timer handler: client dead, exiting
21:10:02 (817618): wrapper (7.7.26015): starting
21:10:02 (817618): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:10:02] Arguments: --nthreads 8
[2025-10-11 21:10:02] Threads: 8
[2025-10-11 21:10:02] This job has been restarted, cleaning up previous attempt
[2025-10-11 21:10:02] Checking for CVMFS
[2025-10-11 21:10:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:10:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:10:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:10:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:10:04] 2.13.1.0 3059378 48140 90408 151601 2 26 39657678 40960001 9510 16776704 0 44842650 99.809 26500135 43422 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 21:10:04] CVMFS is ok
[2025-10-11 21:10:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:10:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:10:04] Further information can be found at the LHC@home message board.
[2025-10-11 21:10:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:10:04] Checking for apptainer binary...
[2025-10-11 21:10:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:10:04] Running /usr/bin/apptainer --version
[2025-10-11 21:10:04] apptainer version 1.4.3-1.el9
[2025-10-11 21:10:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:10:04] c-211-9.aglt2.org
[2025-10-11 21:10:04] apptainer works
[2025-10-11 21:10:04] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:10:04] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:10:04] Starting ATLAS job with PandaID=6838632977
[2025-10-11 21:10:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:31:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:31:02] 2025-10-12 05:27:49,749 | INFO     | monitor loop #1011: job 0:6838632977 is in state 'finished'
[2025-10-12 01:31:02] 2025-10-12 05:27:49,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:31:02] 2025-10-12 05:27:51,605 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 01:31:02] 2025-10-12 05:27:51,619 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2479.6988958333336
[2025-10-12 01:31:02] 2025-10-12 05:27:51,629 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838632977/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:31:02] 2025-10-12 05:27:51,630 | INFO     | extracted standard info from prmon json
[2025-10-12 01:31:02] 2025-10-12 05:27:51,630 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 01:31:02] 2025-10-12 05:27:51,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 01:31:02] 2025-10-12 05:27:51,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:31:02] 2025-10-12 05:27:51,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:31:02] 2025-10-12 05:27:51,637 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:31:02] 2025-10-12 05:27:51,638 | INFO     | sum of square deviations: 4904161719.91237
[2025-10-12 01:31:02] 2025-10-12 05:27:51,640 | INFO     | sum of deviations: 56885187953.89636
[2025-10-12 01:31:02] 2025-10-12 05:27:51,640 | INFO     | mean x: 1760239160.4422312
[2025-10-12 01:31:02] 2025-10-12 05:27:51,640 | INFO     | mean y: 2468081.613545817
[2025-10-12 01:31:02] 2025-10-12 05:27:51,640 | INFO     | -- intersect: -20415197812.02959
[2025-10-12 01:31:02] 2025-10-12 05:27:51,641 | INFO     | intersect: -20415197812.02959
[2025-10-12 01:31:02] 2025-10-12 05:27:51,641 | INFO     | chi2: 3.886275153406124
[2025-10-12 01:31:02] 2025-10-12 05:27:51,642 | INFO     | sum of square deviations: 4616916590.085342
[2025-10-12 01:31:02] 2025-10-12 05:27:51,644 | INFO     | sum of deviations: 72988452701.75609
[2025-10-12 01:31:02] 2025-10-12 05:27:51,644 | INFO     | mean x: 1760239007.9390244
[2025-10-12 01:31:02] 2025-10-12 05:27:51,644 | INFO     | mean y: 2476484.9837398375
[2025-10-12 01:31:02] 2025-10-12 05:27:51,644 | INFO     | -- intersect: -27824996476.22232
[2025-10-12 01:31:02] 2025-10-12 05:27:51,645 | INFO     | intersect: -27824996476.22232
[2025-10-12 01:31:02] 2025-10-12 05:27:51,645 | INFO     | chi2: 3.0822948807422925
[2025-10-12 01:31:02] 2025-10-12 05:27:51,645 | INFO     | current chi2=3.0822948807422925 (change=20.687682702013095 %)
[2025-10-12 01:31:02] 2025-10-12 05:27:51,645 | INFO     | right removable region: 245
[2025-10-12 01:31:02] 2025-10-12 05:27:51,646 | INFO     | sum of square deviations: 4616894571.414609
[2025-10-12 01:31:02] 2025-10-12 05:27:51,648 | INFO     | sum of deviations: -9541760086.46341
[2025-10-12 01:31:02] 2025-10-12 05:27:51,648 | INFO     | mean x: 1760239312.9512196
[2025-10-12 01:31:02] 2025-10-12 05:27:51,648 | INFO     | mean y: 2503219.711382114
[2025-10-12 01:31:02] 2025-10-12 05:27:51,649 | INFO     | -- intersect: 3640398986.907885
[2025-10-12 01:31:02] 2025-10-12 05:27:51,649 | INFO     | intersect: 3640398986.907885
[2025-10-12 01:31:02] 2025-10-12 05:27:51,649 | INFO     | chi2: 1.0394818508270494
[2025-10-12 01:31:02] 2025-10-12 05:27:51,649 | INFO     | current chi2=1.0394818508270494 (change=73.25248960007383 %)
[2025-10-12 01:31:02] 2025-10-12 05:27:51,650 | INFO     | sum of square deviations: 4341069497.875533
[2025-10-12 01:31:02] 2025-10-12 05:27:51,652 | INFO     | sum of deviations: -26229909572.269707
[2025-10-12 01:31:02] 2025-10-12 05:27:51,652 | INFO     | mean x: 1760239465.4605808
[2025-10-12 01:31:02] 2025-10-12 05:27:51,653 | INFO     | mean y: 2512408.4979253113
[2025-10-12 01:31:02] 2025-10-12 05:27:51,653 | INFO     | -- intersect: 10638352730.143753
[2025-10-12 01:31:02] 2025-10-12 05:27:51,653 | INFO     | intersect: 10638352730.143753
[2025-10-12 01:31:02] 2025-10-12 05:27:51,653 | INFO     | chi2: 0.8454711567779594
[2025-10-12 01:31:02] 2025-10-12 05:27:51,654 | INFO     | current chi2=0.8454711567779594 (change=18.66417329891119 %)
[2025-10-12 01:31:02] 2025-10-12 05:27:51,654 | INFO     | left removable region: 20
[2025-10-12 01:31:02] 2025-10-12 05:27:51,654 | INFO     | sum of square deviations: 3532678216.062213
[2025-10-12 01:31:02] 2025-10-12 05:27:51,656 | INFO     | sum of deviations: -8619241898.973333
[2025-10-12 01:31:02] 2025-10-12 05:27:51,656 | INFO     | mean x: 1760239587.471111
[2025-10-12 01:31:02] 2025-10-12 05:27:51,656 | INFO     | mean y: 2521873.7733333334
[2025-10-12 01:31:02] 2025-10-12 05:27:51,657 | INFO     | -- intersect: 4297260844.217775
[2025-10-12 01:31:02] 2025-10-12 05:27:51,657 | INFO     | intersect: 4297260844.217775
[2025-10-12 01:31:02] 2025-10-12 05:27:51,657 | INFO     | chi2: 0.006458532166982127
[2025-10-12 01:31:02] 2025-10-12 05:27:51,657 | INFO     | -- intersect: 4297260844.217775
[2025-10-12 01:31:02] 2025-10-12 05:27:51,658 | INFO     | current memory leak: -2.44 B/s (using 225 data points, chi2=0.01)
[2025-10-12 01:31:02] 2025-10-12 05:27:51,658 | INFO     | could have reported an average CPU frequency of 2467 MHz (12 samples)
[2025-10-12 01:31:02] 2025-10-12 05:27:51,658 | INFO     | ..............................
[2025-10-12 01:31:02] 2025-10-12 05:27:51,659 | INFO     | . Timing measurements:
[2025-10-12 01:31:02] 2025-10-12 05:27:51,659 | INFO     | . get job = 0 s
[2025-10-12 01:31:02] 2025-10-12 05:27:51,659 | INFO     | . initial setup = 5 s
[2025-10-12 01:31:02] 2025-10-12 05:27:51,659 | INFO     | . payload setup = 26 s
[2025-10-12 01:31:02] 2025-10-12 05:27:51,659 | INFO     | . stage-in = 0 s
[2025-10-12 01:31:02] 2025-10-12 05:27:51,659 | INFO     | . payload execution = 15326 s
[2025-10-12 01:31:02] 2025-10-12 05:27:51,659 | INFO     | . stage-out = 5 s
[2025-10-12 01:31:02] 2025-10-12 05:27:51,660 | INFO     | . log creation = 0 s
[2025-10-12 01:31:02] 2025-10-12 05:27:51,660 | INFO     | ..............................
[2025-10-12 01:31:02] 2025-10-12 05:27:51,762 | INFO     | time since job start (15422s) is within the limit (172800.0s)
[2025-10-12 01:31:02] 2025-10-12 05:27:52,238 | INFO     | 
[2025-10-12 01:31:02] 2025-10-12 05:27:52,238 | INFO     | job summary report
[2025-10-12 01:31:02] 2025-10-12 05:27:52,239 | INFO     | --------------------------------------------------
[2025-10-12 01:31:02] 2025-10-12 05:27:52,239 | INFO     | PanDA job id: 6838632977
[2025-10-12 01:31:02] 2025-10-12 05:27:52,239 | INFO     | task id: 46676269
[2025-10-12 01:31:02] 2025-10-12 05:27:52,239 | INFO     | errors: (none)
[2025-10-12 01:31:02] 2025-10-12 05:27:52,239 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:31:02] 2025-10-12 05:27:52,239 | INFO     | pilot state: finished 
[2025-10-12 01:31:02] 2025-10-12 05:27:52,239 | INFO     | transexitcode: 0
[2025-10-12 01:31:02] 2025-10-12 05:27:52,239 | INFO     | exeerrorcode: 0
[2025-10-12 01:31:02] 2025-10-12 05:27:52,239 | INFO     | exeerrordiag: 
[2025-10-12 01:31:02] 2025-10-12 05:27:52,240 | INFO     | exitcode: 0
[2025-10-12 01:31:02] 2025-10-12 05:27:52,240 | INFO     | exitmsg: OK
[2025-10-12 01:31:02] 2025-10-12 05:27:52,240 | INFO     | cpuconsumptiontime: 62657 s
[2025-10-12 01:31:02] 2025-10-12 05:27:52,240 | INFO     | nevents: 400
[2025-10-12 01:31:02] 2025-10-12 05:27:52,240 | INFO     | neventsw: 0
[2025-10-12 01:31:02] 2025-10-12 05:27:52,240 | INFO     | pid: 840102
[2025-10-12 01:31:02] 2025-10-12 05:27:52,240 | INFO     | pgrp: 840102
[2025-10-12 01:31:02] 2025-10-12 05:27:52,240 | INFO     | corecount: 8
[2025-10-12 01:31:02] 2025-10-12 05:27:52,241 | INFO     | event service: False
[2025-10-12 01:31:02] 2025-10-12 05:27:52,241 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 19: 2349231, 24: 2349259, 15354: 2380677, 15360: 2389675, 15361: 2389731, 15382: 2389925}
[2025-10-12 01:31:02] 2025-10-12 05:27:52,241 | INFO     | --------------------------------------------------
[2025-10-12 01:31:02] 2025-10-12 05:27:52,241 | INFO     | 
[2025-10-12 01:31:02] 2025-10-12 05:27:52,241 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 01:31:02] 2025-10-12 05:27:52,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,305 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,307 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:31:02] 2025-10-12 05:27:52,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,307 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:31:02] 2025-10-12 05:27:52,308 | INFO     | job 6838632977 has completed (purged errors)
[2025-10-12 01:31:02] 2025-10-12 05:27:52,308 | INFO     | overall cleanup function is called
[2025-10-12 01:31:02] 2025-10-12 05:27:53,325 | INFO     | --- collectZombieJob: --- 10, [840102]
[2025-10-12 01:31:02] 2025-10-12 05:27:53,358 | INFO     | zombie collector waiting for pid 840102
[2025-10-12 01:31:02] 2025-10-12 05:27:53,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:31:02] 2025-10-12 05:27:53,358 | INFO     | collected zombie processes
[2025-10-12 01:31:02] 2025-10-12 05:27:53,358 | INFO     | will attempt to kill all subprocesses of pid=840102
[2025-10-12 01:31:02] 2025-10-12 05:27:54,253 | INFO     | process IDs to be killed: [840102] (in reverse order)
[2025-10-12 01:31:02] 2025-10-12 05:27:54,594 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:31:02] 2025-10-12 05:27:54,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:31:02] 2025-10-12 05:27:54,621 | INFO     | did not find any defunct processes belonging to 840102
[2025-10-12 01:31:02] 2025-10-12 05:27:54,653 | INFO     | did not find any defunct processes belonging to 840102
[2025-10-12 01:31:02] 2025-10-12 05:27:54,653 | INFO     | ready for new job
[2025-10-12 01:31:02] 2025-10-12 05:27:54,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:31:02] 2025-10-12 05:27:54,664 | INFO     | ***************************************
[2025-10-12 01:31:02] 2025-10-12 05:27:54,664 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:31:02] 2025-10-12 05:27:54,664 | INFO     | ***************************************
[2025-10-12 01:31:02] 2025-10-12 05:27:54,665 | INFO     | 
[2025-10-12 01:31:02] 2025-10-12 05:27:54,676 | INFO     | architecture information:
[2025-10-12 01:31:02] 2025-10-12 05:27:54,678 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:31:02] 2025-10-12 05:27:54,745 | INFO     | cat /etc/os-release:
[2025-10-12 01:31:02] NAME="CentOS Linux"
[2025-10-12 01:31:02] VERSION="7 (Core)"
[2025-10-12 01:31:02] ID="centos"
[2025-10-12 01:31:02] ID_LIKE="rhel fedora"
[2025-10-12 01:31:02] VERSION_ID="7"
[2025-10-12 01:31:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:31:02] ANSI_COLOR="0;31"
[2025-10-12 01:31:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:31:02] HOME_URL="https://www.centos.org/"
[2025-10-12 01:31:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:31:02] 
[2025-10-12 01:31:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:31:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:31:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:31:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:31:02] 
[2025-10-12 01:31:02] 2025-10-12 05:27:54,746 | INFO     | ***************************************
[2025-10-12 01:31:02] 2025-10-12 05:27:55,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 01:31:02] 2025-10-12 05:27:55,319 | INFO     | sufficient remaining disk space (63022563328 B)
[2025-10-12 01:31:02] 2025-10-12 05:27:55,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:31:02] 2025-10-12 05:27:55,319 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:31:02] 2025-10-12 05:27:55,319 | INFO     | update_server=False
[2025-10-12 01:31:02] 2025-10-12 05:27:55,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:31:02] 2025-10-12 05:27:55,375 | INFO     | all data control threads have been joined
[2025-10-12 01:31:02] 2025-10-12 05:27:55,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:31:02] 2025-10-12 05:27:55,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:31:02] 2025-10-12 05:27:55,777 | INFO     | aborting loop
[2025-10-12 01:31:02] 2025-10-12 05:27:55,907 | INFO     | all payload control threads have been joined
[2025-10-12 01:31:02] 2025-10-12 05:27:56,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:31:02] 2025-10-12 05:27:56,225 | INFO     | all job control threads have been joined
[2025-10-12 01:31:02] 2025-10-12 05:27:56,331 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:56,381 | INFO     | [data] control thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:56,428 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:56,467 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:56,468 | INFO     | [job] validate thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:56,469 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:56,772 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:56,782 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:56,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:31:02] 2025-10-12 05:27:56,913 | INFO     | [payload] control thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:57,231 | INFO     | [job] control thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:57,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:57,396 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:57,778 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:57,913 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:58,120 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:27:59,407 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:31:02] 2025-10-12 05:28:16,666 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:31:02] 2025-10-12 05:28:17,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234548774720)>', '<ExcThread(monitor, started 140233744041728)>']
[2025-10-12 01:31:02] 2025-10-12 05:28:22,646 | INFO     | all workflow threads have been joined
[2025-10-12 01:31:02] 2025-10-12 05:28:22,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:31:02] 2025-10-12 05:28:22,647 | INFO     | traces error code: 0
[2025-10-12 01:31:02] 2025-10-12 05:28:22,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:31:02] 2025-10-12 05:28:25,319 | INFO     | PID=827009 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 01:31:02] 2025-10-12 05:28:25,320 | INFO     | .. there are 10 such processes running
[2025-10-12 01:31:02] 2025-10-12 05:28:25,321 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:31:02] 2025-10-12 05:28:25,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:31:02] 2025-10-12 05:28:25,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:31:02] 2025-10-12 05:28:25,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:31:02] 2025-10-12 05:28:25,321 | INFO     | [monitor] control thread has ended
[2025-10-12 01:31:02] 2025-10-12 05:28:29,043 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:31:02] 2025-10-12 05:28:29,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:31:02] 2025-10-12 05:28:29,100 [wrapper] pilotpid: 827009
[2025-10-12 01:31:02] 2025-10-12 05:28:29,103 [wrapper] Pilot exit status: 0
[2025-10-12 01:31:02] 2025-10-12 05:28:29,479 [wrapper] pandaids: 6838632977 6838632977
[2025-10-12 01:31:02] 2025-10-12 05:28:29,532 [wrapper] cleanup supervisor_pilot 1278846 827010
[2025-10-12 01:31:02] 2025-10-12 05:28:29,536 [wrapper] Test setup, not cleaning
[2025-10-12 01:31:02] 2025-10-12 05:28:29,542 [wrapper] apfmon messages muted
[2025-10-12 01:31:02] 2025-10-12 05:28:29,563 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:31:02] 2025-10-12 05:28:29,600 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:31:02]  *** Error codes and diagnostics ***
[2025-10-12 01:31:02]     "exeErrorCode": 0,
[2025-10-12 01:31:02]     "exeErrorDiag": "",
[2025-10-12 01:31:02]     "pilotErrorCode": 0,
[2025-10-12 01:31:02]     "pilotErrorDiag": "",
[2025-10-12 01:31:02]  *** Listing of results directory ***
[2025-10-12 01:31:02] total 634252
[2025-10-12 01:31:02] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 12:20 pilot3.tar.gz
[2025-10-12 01:31:02] -rwx------. 1 boincer umatlas     36292 Oct 11 12:40 runpilot2-wrapper.sh
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 12:40 queuedata.json
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas       100 Oct 11 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:31:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 18:43 run_atlas
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas       105 Oct 11 18:43 job.xml
[2025-10-12 01:31:02] -rw-r--r--. 3 boincer umatlas 220466347 Oct 11 18:43 EVNT.46676267._002457.pool.root.1
[2025-10-12 01:31:02] -rw-r--r--. 3 boincer umatlas 220466347 Oct 11 18:43 ATLAS.root_0
[2025-10-12 01:31:02] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 18:43 input.tar.gz
[2025-10-12 01:31:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:43 start_atlas.sh
[2025-10-12 01:31:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 18:43 shared
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas         0 Oct 11 18:43 boinc_lockfile
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 21:10 pandaJob.out
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas    975496 Oct 11 21:10 agis_schedconf.cvmfs.json
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas 199620756 Oct 12 01:26 HITS.46676269._061186.pool.root.1
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas       531 Oct 12 01:26 boinc_task_state.xml
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas      1058 Oct 12 01:27 memory_monitor_summary.json
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas   1560580 Oct 12 01:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas    475021 Oct 12 01:27 log.46676269._061186.job.log.tgz.1
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas      7856 Oct 12 01:27 heartbeat.json
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas        96 Oct 12 01:28 pilot_heartbeat.json
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas       822 Oct 12 01:28 pilotlog.txt
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas   2031011 Oct 12 01:28 log.46676269._061186.job.log.1
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas       357 Oct 12 01:28 output.list
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas       620 Oct 12 01:28 runtime_log
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas   2529280 Oct 12 01:28 result.tar.gz
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas      8784 Oct 12 01:28 runtime_log.err
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas       785 Oct 12 01:28 JBMLDmporR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6ygNDmCNWomm.diag
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas        28 Oct 12 01:30 wrapper_checkpoint.txt
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas      6613 Oct 12 01:31 init_data.xml
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 01:31 boinc_mmap_file
[2025-10-12 01:31:02] -rw-r--r--. 1 boincer umatlas     23492 Oct 12 01:31 stderr.txt
[2025-10-12 01:31:02] HITS file was successfully produced:
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas 199620756 Oct 12 01:26 shared/HITS.pool.root.1
[2025-10-12 01:31:02]  *** Contents of shared directory: ***
[2025-10-12 01:31:02] total 413300
[2025-10-12 01:31:02] -rw-r--r--. 3 boincer umatlas 220466347 Oct 11 18:43 ATLAS.root_0
[2025-10-12 01:31:02] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 18:43 input.tar.gz
[2025-10-12 01:31:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:43 start_atlas.sh
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas 199620756 Oct 12 01:26 HITS.pool.root.1
[2025-10-12 01:31:02] -rw-------. 1 boincer umatlas   2529280 Oct 12 01:28 result.tar.gz
01:31:04 (817618): run_atlas exited; CPU time 63080.577569
01:31:04 (817618): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN