Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:54:28 (3011859): wrapper (7.7.26015): starting
02:54:28 (3011859): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 02:54:28] Arguments: --nthreads 4
[2025-10-13 02:54:28] Threads: 4
[2025-10-13 02:54:28] Checking for CVMFS
[2025-10-13 02:54:28] No cvmfs_config command found, will try listing directly
[2025-10-13 02:54:28] CVMFS is ok
[2025-10-13 02:54:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:54:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:54:28] Further information can be found at the LHC@home message board.
[2025-10-13 02:54:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:54:28] Checking for apptainer binary...
[2025-10-13 02:54:28] which: no apptainer in ((null))
[2025-10-13 02:54:28] apptainer is not installed, using version from CVMFS
[2025-10-13 02:54:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:54:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-10-13 02:54:28] apptainer works
[2025-10-13 02:54:28] Set ATHENA_PROC_NUMBER=4
[2025-10-13 02:54:28] Set ATHENA_CORE_NUMBER=4
[2025-10-13 02:54:28] Starting ATLAS job with PandaID=6838633869
[2025-10-13 02:54:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:28:30]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:28:30] 2025-10-13 03:27:24,698 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:28:30] 2025-10-13 03:27:24,698 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:28:30] 2025-10-13 03:27:24,698 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:28:30] 2025-10-13 03:27:24,701 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:28:30] 2025-10-13 03:27:24,701 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 05:28:30] 2025-10-13 03:27:24,702 | INFO     | sum of deviations: 12089603724.999998
[2025-10-13 05:28:30] 2025-10-13 03:27:24,702 | INFO     | mean x: 1760321459.5
[2025-10-13 05:28:30] 2025-10-13 03:27:24,702 | INFO     | mean y: 2290357.64
[2025-10-13 05:28:30] 2025-10-13 03:27:24,702 | INFO     | -- intersect: -20333972667.857433
[2025-10-13 05:28:30] 2025-10-13 03:27:24,703 | INFO     | intersect: -20333972667.857433
[2025-10-13 05:28:30] 2025-10-13 03:27:24,703 | INFO     | chi2: 2.0043335426346305
[2025-10-13 05:28:30] 2025-10-13 03:27:24,703 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,704 | INFO     | sum of deviations: 20199190652.999996
[2025-10-13 05:28:30] 2025-10-13 03:27:24,704 | INFO     | mean x: 1760321307.0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,704 | INFO     | mean y: 2302221.206896552
[2025-10-13 05:28:30] 2025-10-13 03:27:24,704 | INFO     | -- intersect: -37612964010.25367
[2025-10-13 05:28:30] 2025-10-13 03:27:24,704 | INFO     | intersect: -37612964010.25367
[2025-10-13 05:28:30] 2025-10-13 03:27:24,704 | INFO     | chi2: 1.307508778838918
[2025-10-13 05:28:30] 2025-10-13 03:27:24,705 | INFO     | current chi2=1.307508778838918 (change=34.76590841660811 %)
[2025-10-13 05:28:30] 2025-10-13 03:27:24,705 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,706 | INFO     | sum of deviations: 19383821800.5
[2025-10-13 05:28:30] 2025-10-13 03:27:24,706 | INFO     | mean x: 1760321154.5
[2025-10-13 05:28:30] 2025-10-13 03:27:24,706 | INFO     | mean y: 2300904.2928571426
[2025-10-13 05:28:30] 2025-10-13 03:27:24,706 | INFO     | -- intersect: -40101999444.053566
[2025-10-13 05:28:30] 2025-10-13 03:27:24,706 | INFO     | intersect: -40101999444.053566
[2025-10-13 05:28:30] 2025-10-13 03:27:24,706 | INFO     | chi2: 1.3085967948631552
[2025-10-13 05:28:30] 2025-10-13 03:27:24,706 | INFO     | current chi2=1.3085967948631552 (change=-0.08321290394726209 %)
[2025-10-13 05:28:30] 2025-10-13 03:27:24,706 | INFO     | right removable region: 139
[2025-10-13 05:28:30] 2025-10-13 03:27:24,707 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,707 | INFO     | sum of deviations: -6251656187.0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,707 | INFO     | mean x: 1760321612.0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,707 | INFO     | mean y: 2317513.455172414
[2025-10-13 05:28:30] 2025-10-13 03:27:24,708 | INFO     | -- intersect: 11644256868.632309
[2025-10-13 05:28:30] 2025-10-13 03:27:24,708 | INFO     | intersect: 11644256868.632309
[2025-10-13 05:28:30] 2025-10-13 03:27:24,708 | INFO     | chi2: 0.7276435076130221
[2025-10-13 05:28:30] 2025-10-13 03:27:24,708 | INFO     | current chi2=0.7276435076130221 (change=63.69648603213223 %)
[2025-10-13 05:28:30] 2025-10-13 03:27:24,708 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,709 | INFO     | sum of deviations: -7142817234.5
[2025-10-13 05:28:30] 2025-10-13 03:27:24,709 | INFO     | mean x: 1760321764.5
[2025-10-13 05:28:30] 2025-10-13 03:27:24,709 | INFO     | mean y: 2318911.8785714284
[2025-10-13 05:28:30] 2025-10-13 03:27:24,709 | INFO     | -- intersect: 14780508162.661976
[2025-10-13 05:28:30] 2025-10-13 03:27:24,710 | INFO     | intersect: 14780508162.661976
[2025-10-13 05:28:30] 2025-10-13 03:27:24,710 | INFO     | chi2: 0.721911504095871
[2025-10-13 05:28:30] 2025-10-13 03:27:24,710 | INFO     | current chi2=0.721911504095871 (change=0.787748871140825 %)
[2025-10-13 05:28:30] 2025-10-13 03:27:24,710 | INFO     | left removable region: 20
[2025-10-13 05:28:30] 2025-10-13 03:27:24,710 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,711 | INFO     | sum of deviations: 1939832756.9999998
[2025-10-13 05:28:30] 2025-10-13 03:27:24,711 | INFO     | mean x: 1760321734.0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,711 | INFO     | mean y: 2330150.6470588236
[2025-10-13 05:28:30] 2025-10-13 03:27:24,711 | INFO     | -- intersect: -6533002543.772161
[2025-10-13 05:28:30] 2025-10-13 03:27:24,711 | INFO     | intersect: -6533002543.772161
[2025-10-13 05:28:30] 2025-10-13 03:27:24,711 | INFO     | chi2: 0.0008405530727523217
[2025-10-13 05:28:30] 2025-10-13 03:27:24,711 | INFO     | -- intersect: -6533002543.772161
[2025-10-13 05:28:30] 2025-10-13 03:27:24,712 | INFO     | current memory leak: 3.71 B/s (using 119 data points, chi2=0.00)
[2025-10-13 05:28:30] 2025-10-13 03:27:24,712 | INFO     | could have reported an average CPU frequency of 2711 MHz (9 samples)
[2025-10-13 05:28:30] 2025-10-13 03:27:24,712 | INFO     | ..............................
[2025-10-13 05:28:30] 2025-10-13 03:27:24,712 | INFO     | . Timing measurements:
[2025-10-13 05:28:30] 2025-10-13 03:27:24,712 | INFO     | . get job = 0 s
[2025-10-13 05:28:30] 2025-10-13 03:27:24,712 | INFO     | . initial setup = 1 s
[2025-10-13 05:28:30] 2025-10-13 03:27:24,712 | INFO     | . payload setup = 8 s
[2025-10-13 05:28:30] 2025-10-13 03:27:24,713 | INFO     | . stage-in = 0 s
[2025-10-13 05:28:30] 2025-10-13 03:27:24,713 | INFO     | . payload execution = 9120 s
[2025-10-13 05:28:30] 2025-10-13 03:27:24,713 | INFO     | . stage-out = 0 s
[2025-10-13 05:28:30] 2025-10-13 03:27:24,713 | INFO     | . log creation = 0 s
[2025-10-13 05:28:30] 2025-10-13 03:27:24,713 | INFO     | ..............................
[2025-10-13 05:28:30] 2025-10-13 03:27:24,807 | INFO     | 
[2025-10-13 05:28:30] 2025-10-13 03:27:24,808 | INFO     | job summary report
[2025-10-13 05:28:30] 2025-10-13 03:27:24,808 | INFO     | --------------------------------------------------
[2025-10-13 05:28:30] 2025-10-13 03:27:24,808 | INFO     | PanDA job id: 6838633869
[2025-10-13 05:28:30] 2025-10-13 03:27:24,808 | INFO     | task id: 46676269
[2025-10-13 05:28:30] 2025-10-13 03:27:24,808 | INFO     | errors: (none)
[2025-10-13 05:28:30] 2025-10-13 03:27:24,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:28:30] 2025-10-13 03:27:24,808 | INFO     | pilot state: finished 
[2025-10-13 05:28:30] 2025-10-13 03:27:24,808 | INFO     | transexitcode: 0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | exeerrorcode: 0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | exeerrordiag: 
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | exitcode: 0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | exitmsg: OK
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | cpuconsumptiontime: 34622 s
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | nevents: 400
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | neventsw: 0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | pid: 3023747
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | pgrp: 3023747
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | corecount: 4
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | event service: False
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | sizes: {0: 2348869, 7: 2349131, 11: 2349159, 9132: 2377971, 9134: 2386993, 9137: 2387049, 9145: 2387435}
[2025-10-13 05:28:30] 2025-10-13 03:27:24,809 | INFO     | --------------------------------------------------
[2025-10-13 05:28:30] 2025-10-13 03:27:24,810 | INFO     | 
[2025-10-13 05:28:30] 2025-10-13 03:27:24,810 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-10-13 05:28:30] 2025-10-13 03:27:24,841 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,842 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,842 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,842 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,843 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:28:30] 2025-10-13 03:27:24,844 | INFO     | job 6838633869 has completed (purged errors)
[2025-10-13 05:28:30] 2025-10-13 03:27:24,844 | INFO     | overall cleanup function is called
[2025-10-13 05:28:30] 2025-10-13 03:27:25,853 | INFO     | --- collectZombieJob: --- 10, [3023747]
[2025-10-13 05:28:30] 2025-10-13 03:27:25,854 | INFO     | zombie collector waiting for pid 3023747
[2025-10-13 05:28:30] 2025-10-13 03:27:25,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:28:30] 2025-10-13 03:27:25,854 | INFO     | collected zombie processes
[2025-10-13 05:28:30] 2025-10-13 03:27:25,854 | INFO     | will attempt to kill all subprocesses of pid=3023747
[2025-10-13 05:28:30] 2025-10-13 03:27:26,596 | INFO     | process IDs to be killed: [3023747] (in reverse order)
[2025-10-13 05:28:30] 2025-10-13 03:27:26,843 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:28:30] 2025-10-13 03:27:26,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:28:30] 2025-10-13 03:27:26,871 | INFO     | did not find any defunct processes belonging to 3023747
[2025-10-13 05:28:30] 2025-10-13 03:27:26,898 | INFO     | did not find any defunct processes belonging to 3023747
[2025-10-13 05:28:30] 2025-10-13 03:27:26,902 | INFO     | ready for new job
[2025-10-13 05:28:30] 2025-10-13 03:27:26,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:28:30] 2025-10-13 03:27:26,905 | INFO     | ***************************************
[2025-10-13 05:28:30] 2025-10-13 03:27:26,905 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:28:30] 2025-10-13 03:27:26,905 | INFO     | ***************************************
[2025-10-13 05:28:30] 2025-10-13 03:27:26,905 | INFO     | 
[2025-10-13 05:28:30] 2025-10-13 03:27:26,914 | INFO     | architecture information:
[2025-10-13 05:28:30] 2025-10-13 03:27:26,914 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:28:30] 2025-10-13 03:27:26,935 | INFO     | cat /etc/os-release:
[2025-10-13 05:28:30] NAME="CentOS Linux"
[2025-10-13 05:28:30] VERSION="7 (Core)"
[2025-10-13 05:28:30] ID="centos"
[2025-10-13 05:28:30] ID_LIKE="rhel fedora"
[2025-10-13 05:28:30] VERSION_ID="7"
[2025-10-13 05:28:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:28:30] ANSI_COLOR="0;31"
[2025-10-13 05:28:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:28:30] HOME_URL="https://www.centos.org/"
[2025-10-13 05:28:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:28:30] 
[2025-10-13 05:28:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:28:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:28:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:28:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:28:30] 
[2025-10-13 05:28:30] 2025-10-13 03:27:26,935 | INFO     | ***************************************
[2025-10-13 05:28:30] 2025-10-13 03:27:27,437 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-10-13 05:28:30] 2025-10-13 03:27:27,462 | INFO     | sufficient remaining disk space (3341900840960 B)
[2025-10-13 05:28:30] 2025-10-13 03:27:27,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:28:30] 2025-10-13 03:27:27,463 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:28:30] 2025-10-13 03:27:27,463 | INFO     | update_server=False
[2025-10-13 05:28:30] 2025-10-13 03:27:27,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:28:30] 2025-10-13 03:27:27,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:28:30] 2025-10-13 03:27:27,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:28:30] 2025-10-13 03:27:27,533 | INFO     | all payload control threads have been joined
[2025-10-13 05:28:30] 2025-10-13 03:27:27,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:28:30] 2025-10-13 03:27:27,662 | INFO     | aborting loop
[2025-10-13 05:28:30] 2025-10-13 03:27:27,895 | INFO     | all data control threads have been joined
[2025-10-13 05:28:30] 2025-10-13 03:27:28,409 | INFO     | all job control threads have been joined
[2025-10-13 05:28:30] 2025-10-13 03:27:28,467 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:28,478 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:28,539 | INFO     | [payload] control thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:28,668 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:28,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:28,900 | INFO     | [data] control thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:29,185 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:29,268 | INFO     | [job] validate thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:29,414 | INFO     | [job] control thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:29,435 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:29,467 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:29,486 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:29,491 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:29,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:28:30] 2025-10-13 03:27:30,022 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:30,823 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:31,471 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:28:30] 2025-10-13 03:27:55,789 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:28:30] 2025-10-13 03:27:56,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22779228526400)>', '<ExcThread(monitor, started 22778979755776)>']
[2025-10-13 05:28:30] 2025-10-13 03:27:58,407 | INFO     | PID=3015880 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:28:30] 2025-10-13 03:27:58,407 | INFO     | .. there are 9 such processes running
[2025-10-13 05:28:30] 2025-10-13 03:27:58,408 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:28:30] 2025-10-13 03:27:58,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:28:30] 2025-10-13 03:27:58,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:28:30] 2025-10-13 03:27:58,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:28:30] 2025-10-13 03:27:58,408 | INFO     | [monitor] control thread has ended
[2025-10-13 05:28:30] 2025-10-13 03:28:01,727 | INFO     | all workflow threads have been joined
[2025-10-13 05:28:30] 2025-10-13 03:28:01,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:28:30] 2025-10-13 03:28:01,728 | INFO     | traces error code: 0
[2025-10-13 05:28:30] 2025-10-13 03:28:01,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:28:30] 2025-10-13 03:28:01,915 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:28:30] 2025-10-13 03:28:01,918 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:28:30] 2025-10-13 03:28:01,923 [wrapper] pilotpid: 3015880
[2025-10-13 05:28:30] 2025-10-13 03:28:01,926 [wrapper] Pilot exit status: 0
[2025-10-13 05:28:30] 2025-10-13 03:28:01,938 [wrapper] pandaids: 6838633869
[2025-10-13 05:28:30] 2025-10-13 03:28:02,114 [wrapper] cleanup supervisor_pilot 3365459 3015881
[2025-10-13 05:28:30] 2025-10-13 03:28:02,118 [wrapper] Test setup, not cleaning
[2025-10-13 05:28:30] 2025-10-13 03:28:02,122 [wrapper] apfmon messages muted
[2025-10-13 05:28:30] 2025-10-13 03:28:02,127 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:28:30] 2025-10-13 03:28:02,131 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:28:30]  *** Error codes and diagnostics ***
[2025-10-13 05:28:30]     "exeErrorCode": 0,
[2025-10-13 05:28:30]     "exeErrorDiag": "",
[2025-10-13 05:28:30]     "pilotErrorCode": 0,
[2025-10-13 05:28:30]     "pilotErrorDiag": "",
[2025-10-13 05:28:30]  *** Listing of results directory ***
[2025-10-13 05:28:30] total 419440
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc    557409 Oct 11 18:20 pilot3.tar.gz
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:59 queuedata.json
[2025-10-13 05:28:30] -rwx------ 1 boinc boinc     36292 Oct 11 19:00 runpilot2-wrapper.sh
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:28:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:54 run_atlas
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:54 job.xml
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc      6688 Oct 13 02:54 init_data.xml
[2025-10-13 05:28:30] -rw-r--r-- 2 boinc boinc 223531271 Oct 13 02:54 EVNT.46676267._002465.pool.root.1
[2025-10-13 05:28:30] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:54 start_atlas.sh
[2025-10-13 05:28:30] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:54 shared
[2025-10-13 05:28:30] -rw-r--r-- 2 boinc boinc    569680 Oct 13 02:54 input.tar.gz
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:54 boinc_lockfile
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc      2550 Oct 13 02:54 pandaJob.out
[2025-10-13 05:28:30] -rw------- 1 boinc boinc    975603 Oct 13 02:54 agis_schedconf.cvmfs.json
[2025-10-13 05:28:30] -rw------- 1 boinc boinc   1560580 Oct 13 02:54 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:28:30] drwx------ 5 boinc boinc      4096 Oct 13 02:54 pilot3
[2025-10-13 05:28:30] -rw------- 1 boinc boinc 198791416 Oct 13 05:26 HITS.46676269._061389.pool.root.1
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc       528 Oct 13 05:26 boinc_task_state.xml
[2025-10-13 05:28:30] -rw------- 1 boinc boinc      1026 Oct 13 05:27 memory_monitor_summary.json
[2025-10-13 05:28:30] -rw------- 1 boinc boinc    338912 Oct 13 05:27 log.46676269._061389.job.log.tgz.1
[2025-10-13 05:28:30] -rw------- 1 boinc boinc        95 Oct 13 05:27 pilot_heartbeat.json
[2025-10-13 05:28:30] -rw------- 1 boinc boinc      7782 Oct 13 05:27 heartbeat.json
[2025-10-13 05:28:30] -rw------- 1 boinc boinc      4835 Oct 13 05:28 pilotlog.txt
[2025-10-13 05:28:30] -rw------- 1 boinc boinc   1296587 Oct 13 05:28 log.46676269._061389.job.log.1
[2025-10-13 05:28:30] -rw------- 1 boinc boinc       357 Oct 13 05:28 output.list
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:28 runtime_log
[2025-10-13 05:28:30] -rw------- 1 boinc boinc   1658880 Oct 13 05:28 result.tar.gz
[2025-10-13 05:28:30] -rw------- 1 boinc boinc       662 Oct 13 05:28 ucMKDm37rR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmuGSMDm1TPDnm.diag
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc      9084 Oct 13 05:28 runtime_log.err
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc        26 Oct 13 05:28 wrapper_checkpoint.txt
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:28 boinc_mmap_file
[2025-10-13 05:28:30] -rw-r--r-- 1 boinc boinc     20654 Oct 13 05:28 stderr.txt
[2025-10-13 05:28:30] HITS file was successfully produced:
[2025-10-13 05:28:30] -rw------- 1 boinc boinc 198791416 Oct 13 05:26 shared/HITS.pool.root.1
[2025-10-13 05:28:30]  *** Contents of shared directory: ***
[2025-10-13 05:28:30] total 414636
[2025-10-13 05:28:30] -rw-r--r-- 2 boinc boinc 223531271 Oct 13 02:54 ATLAS.root_0
[2025-10-13 05:28:30] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:54 start_atlas.sh
[2025-10-13 05:28:30] -rw-r--r-- 2 boinc boinc    569680 Oct 13 02:54 input.tar.gz
[2025-10-13 05:28:30] -rw------- 1 boinc boinc 198791416 Oct 13 05:26 HITS.pool.root.1
[2025-10-13 05:28:30] -rw------- 1 boinc boinc   1658880 Oct 13 05:28 result.tar.gz
05:28:31 (3011859): run_atlas exited; CPU time 35216.102288
05:28:31 (3011859): called boinc_finish(0)

</stderr_txt>
]]>

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