Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:34:17 (27348): wrapper (7.7.26015): starting
17:34:17 (27348): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:34:17] Arguments: --nthreads 8
[2025-10-11 17:34:17] Threads: 8
[2025-10-11 17:34:17] Checking for CVMFS
[2025-10-11 17:34:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:34:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:34:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:34:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:34:17] 2.11.2.0 4362 112535 137896 151597 2 188 18100378 18432000 1833 130560 1 109470196 99.989 4937380 22214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:34:17] CVMFS is ok
[2025-10-11 17:34:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:34:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:34:17] Further information can be found at the LHC@home message board.
[2025-10-11 17:34:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:34:17] Checking for apptainer binary...
[2025-10-11 17:34:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:34:17] Running /usr/bin/apptainer --version
[2025-10-11 17:34:17] apptainer version 1.3.2-1.el7
[2025-10-11 17:34:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:34:18] c-206-29.aglt2.org
[2025-10-11 17:34:18] apptainer works
[2025-10-11 17:34:18] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:34:18] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:34:18] Starting ATLAS job with PandaID=6838632920
[2025-10-11 17:34:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:46:54]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:46:54] 2025-10-12 00:45:55,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:46:54] 2025-10-12 00:45:55,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:46:54] 2025-10-12 00:45:55,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:46:54] 2025-10-12 00:45:55,130 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:46:54] 2025-10-12 00:45:55,130 | INFO     | sum of square deviations: 2060343747.0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,131 | INFO     | sum of deviations: 25451071235.999996
[2025-10-11 20:46:54] 2025-10-12 00:45:55,131 | INFO     | mean x: 1760224197.5
[2025-10-11 20:46:54] 2025-10-12 00:45:55,131 | INFO     | mean y: 2482902.3085106383
[2025-10-11 20:46:54] 2025-10-12 00:45:55,131 | INFO     | -- intersect: -21741263260.017395
[2025-10-11 20:46:54] 2025-10-12 00:45:55,131 | INFO     | intersect: -21741263260.017395
[2025-10-11 20:46:54] 2025-10-12 00:45:55,132 | INFO     | chi2: 1.4964721689544598
[2025-10-11 20:46:54] 2025-10-12 00:45:55,132 | INFO     | sum of square deviations: 1900284932.0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,133 | INFO     | sum of deviations: 24649442847.0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,133 | INFO     | mean x: 1760224045.0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,133 | INFO     | mean y: 2482138.464480874
[2025-10-11 20:46:54] 2025-10-12 00:45:55,133 | INFO     | -- intersect: -22830168515.391598
[2025-10-11 20:46:54] 2025-10-12 00:45:55,133 | INFO     | intersect: -22830168515.391598
[2025-10-11 20:46:54] 2025-10-12 00:45:55,133 | INFO     | chi2: 1.4975729905529693
[2025-10-11 20:46:54] 2025-10-12 00:45:55,134 | INFO     | current chi2=1.4975729905529693 (change=-0.07356111402183045 %)
[2025-10-11 20:46:54] 2025-10-12 00:45:55,134 | INFO     | right removable region: 182
[2025-10-11 20:46:54] 2025-10-12 00:45:55,134 | INFO     | sum of square deviations: 1900284932.0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,135 | INFO     | sum of deviations: -3826951753.999999
[2025-10-11 20:46:54] 2025-10-12 00:45:55,135 | INFO     | mean x: 1760224350.0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,135 | INFO     | mean y: 2510492.792349727
[2025-10-11 20:46:54] 2025-10-12 00:45:55,135 | INFO     | -- intersect: 3547396604.464159
[2025-10-11 20:46:54] 2025-10-12 00:45:55,135 | INFO     | intersect: 3547396604.464159
[2025-10-11 20:46:54] 2025-10-12 00:45:55,135 | INFO     | chi2: 0.07553946095298392
[2025-10-11 20:46:54] 2025-10-12 00:45:55,136 | INFO     | current chi2=0.07553946095298392 (change=94.952163994753 %)
[2025-10-11 20:46:54] 2025-10-12 00:45:55,136 | INFO     | sum of square deviations: 1748737904.5
[2025-10-11 20:46:54] 2025-10-12 00:45:55,137 | INFO     | sum of deviations: -7645701691.999999
[2025-10-11 20:46:54] 2025-10-12 00:45:55,137 | INFO     | mean x: 1760224502.5
[2025-10-11 20:46:54] 2025-10-12 00:45:55,137 | INFO     | mean y: 2514283.382022472
[2025-10-11 20:46:54] 2025-10-12 00:45:55,137 | INFO     | -- intersect: 7698436824.108369
[2025-10-11 20:46:54] 2025-10-12 00:45:55,137 | INFO     | intersect: 7698436824.108369
[2025-10-11 20:46:54] 2025-10-12 00:45:55,137 | INFO     | chi2: 0.04110688589896504
[2025-10-11 20:46:54] 2025-10-12 00:45:55,138 | INFO     | current chi2=0.04110688589896504 (change=45.58223558869432 %)
[2025-10-11 20:46:54] 2025-10-12 00:45:55,138 | INFO     | sum of square deviations: 1605470102.0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,139 | INFO     | sum of deviations: -5798489321.999999
[2025-10-11 20:46:54] 2025-10-12 00:45:55,140 | INFO     | mean x: 1760224655.0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,140 | INFO     | mean y: 2512312.3468208094
[2025-10-11 20:46:54] 2025-10-12 00:45:55,140 | INFO     | -- intersect: 6359929902.137997
[2025-10-11 20:46:54] 2025-10-12 00:45:55,140 | INFO     | intersect: 6359929902.137997
[2025-10-11 20:46:54] 2025-10-12 00:45:55,141 | INFO     | chi2: 0.03935006599624297
[2025-10-11 20:46:54] 2025-10-12 00:45:55,141 | INFO     | current chi2=0.03935006599624297 (change=4.273784949412338 %)
[2025-10-11 20:46:54] 2025-10-12 00:45:55,141 | INFO     | left removable region: 30
[2025-10-11 20:46:54] 2025-10-12 00:45:55,141 | INFO     | sum of square deviations: 1088905998.0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,143 | INFO     | sum of deviations: 2146125240.9999995
[2025-10-11 20:46:54] 2025-10-12 00:45:55,143 | INFO     | mean x: 1760224929.5
[2025-10-11 20:46:54] 2025-10-12 00:45:55,143 | INFO     | mean y: 2502101.013157895
[2025-10-11 20:46:54] 2025-10-12 00:45:55,143 | INFO     | -- intersect: -3466725874.565864
[2025-10-11 20:46:54] 2025-10-12 00:45:55,143 | INFO     | intersect: -3466725874.565864
[2025-10-11 20:46:54] 2025-10-12 00:45:55,144 | INFO     | chi2: 0.01394276794987378
[2025-10-11 20:46:54] 2025-10-12 00:45:55,144 | INFO     | -- intersect: -3466725874.565864
[2025-10-11 20:46:54] 2025-10-12 00:45:55,144 | INFO     | current memory leak: 1.97 B/s (using 152 data points, chi2=0.01)
[2025-10-11 20:46:54] 2025-10-12 00:45:55,145 | INFO     | could have reported an average CPU frequency of 2572 MHz (10 samples)
[2025-10-11 20:46:54] 2025-10-12 00:45:55,145 | INFO     | ..............................
[2025-10-11 20:46:54] 2025-10-12 00:45:55,145 | INFO     | . Timing measurements:
[2025-10-11 20:46:54] 2025-10-12 00:45:55,145 | INFO     | . get job = 0 s
[2025-10-11 20:46:54] 2025-10-12 00:45:55,145 | INFO     | . initial setup = 2 s
[2025-10-11 20:46:54] 2025-10-12 00:45:55,146 | INFO     | . payload setup = 5 s
[2025-10-11 20:46:54] 2025-10-12 00:45:55,146 | INFO     | . stage-in = 0 s
[2025-10-11 20:46:54] 2025-10-12 00:45:55,146 | INFO     | . payload execution = 11452 s
[2025-10-11 20:46:54] 2025-10-12 00:45:55,146 | INFO     | . stage-out = 2 s
[2025-10-11 20:46:54] 2025-10-12 00:45:55,146 | INFO     | . log creation = 0 s
[2025-10-11 20:46:54] 2025-10-12 00:45:55,146 | INFO     | ..............................
[2025-10-11 20:46:54] 2025-10-12 00:45:55,446 | INFO     | 
[2025-10-11 20:46:54] 2025-10-12 00:45:55,446 | INFO     | job summary report
[2025-10-11 20:46:54] 2025-10-12 00:45:55,446 | INFO     | --------------------------------------------------
[2025-10-11 20:46:54] 2025-10-12 00:45:55,446 | INFO     | PanDA job id: 6838632920
[2025-10-11 20:46:54] 2025-10-12 00:45:55,447 | INFO     | task id: 46676269
[2025-10-11 20:46:54] 2025-10-12 00:45:55,447 | INFO     | errors: (none)
[2025-10-11 20:46:54] 2025-10-12 00:45:55,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:46:54] 2025-10-12 00:45:55,447 | INFO     | pilot state: finished 
[2025-10-11 20:46:54] 2025-10-12 00:45:55,447 | INFO     | transexitcode: 0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,447 | INFO     | exeerrorcode: 0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,448 | INFO     | exeerrordiag: 
[2025-10-11 20:46:54] 2025-10-12 00:45:55,448 | INFO     | exitcode: 0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,448 | INFO     | exitmsg: OK
[2025-10-11 20:46:54] 2025-10-12 00:45:55,448 | INFO     | cpuconsumptiontime: 86457 s
[2025-10-11 20:46:54] 2025-10-12 00:45:55,448 | INFO     | nevents: 400
[2025-10-11 20:46:54] 2025-10-12 00:45:55,448 | INFO     | neventsw: 0
[2025-10-11 20:46:54] 2025-10-12 00:45:55,449 | INFO     | pid: 5127
[2025-10-11 20:46:54] 2025-10-12 00:45:55,449 | INFO     | pgrp: 5127
[2025-10-11 20:46:54] 2025-10-12 00:45:55,449 | INFO     | corecount: 8
[2025-10-11 20:46:54] 2025-10-12 00:45:55,449 | INFO     | event service: False
[2025-10-11 20:46:54] 2025-10-12 00:45:55,449 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 11461: 2378532, 11463: 2387530, 11464: 2387586, 11470: 2387908}
[2025-10-11 20:46:54] 2025-10-12 00:45:55,449 | INFO     | --------------------------------------------------
[2025-10-11 20:46:54] 2025-10-12 00:45:55,450 | INFO     | 
[2025-10-11 20:46:54] 2025-10-12 00:45:55,450 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 20:46:54] 2025-10-12 00:45:55,469 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,469 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,470 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,470 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,470 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,470 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,470 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,470 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:46:54] 2025-10-12 00:45:55,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:46:54] 2025-10-12 00:45:55,472 | INFO     | job 6838632920 has completed (purged errors)
[2025-10-11 20:46:54] 2025-10-12 00:45:55,472 | INFO     | overall cleanup function is called
[2025-10-11 20:46:54] 2025-10-12 00:45:56,479 | INFO     | --- collectZombieJob: --- 10, [5127]
[2025-10-11 20:46:54] 2025-10-12 00:45:56,479 | INFO     | zombie collector waiting for pid 5127
[2025-10-11 20:46:54] 2025-10-12 00:45:56,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:46:54] 2025-10-12 00:45:56,480 | INFO     | collected zombie processes
[2025-10-11 20:46:54] 2025-10-12 00:45:56,480 | INFO     | will attempt to kill all subprocesses of pid=5127
[2025-10-11 20:46:54] 2025-10-12 00:45:56,624 | INFO     | process IDs to be killed: [5127] (in reverse order)
[2025-10-11 20:46:54] 2025-10-12 00:45:56,663 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:46:54] 2025-10-12 00:45:56,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:46:54] 2025-10-12 00:45:56,667 | INFO     | did not find any defunct processes belonging to 5127
[2025-10-11 20:46:54] 2025-10-12 00:45:56,670 | INFO     | did not find any defunct processes belonging to 5127
[2025-10-11 20:46:54] 2025-10-12 00:45:56,670 | INFO     | ready for new job
[2025-10-11 20:46:54] 2025-10-12 00:45:56,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:46:54] 2025-10-12 00:45:56,671 | INFO     | ***************************************
[2025-10-11 20:46:54] 2025-10-12 00:45:56,672 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:46:54] 2025-10-12 00:45:56,672 | INFO     | ***************************************
[2025-10-11 20:46:54] 2025-10-12 00:45:56,672 | INFO     | 
[2025-10-11 20:46:54] 2025-10-12 00:45:56,673 | INFO     | architecture information:
[2025-10-11 20:46:54] 2025-10-12 00:45:56,673 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:46:54] 2025-10-12 00:45:56,686 | INFO     | cat /etc/os-release:
[2025-10-11 20:46:54] NAME="CentOS Linux"
[2025-10-11 20:46:54] VERSION="7 (Core)"
[2025-10-11 20:46:54] ID="centos"
[2025-10-11 20:46:54] ID_LIKE="rhel fedora"
[2025-10-11 20:46:54] VERSION_ID="7"
[2025-10-11 20:46:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:46:54] ANSI_COLOR="0;31"
[2025-10-11 20:46:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:46:54] HOME_URL="https://www.centos.org/"
[2025-10-11 20:46:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:46:54] 
[2025-10-11 20:46:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:46:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:46:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:46:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:46:54] 
[2025-10-11 20:46:54] 2025-10-12 00:45:56,686 | INFO     | ***************************************
[2025-10-11 20:46:54] 2025-10-12 00:45:57,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 20:46:54] 2025-10-12 00:45:57,205 | INFO     | sufficient remaining disk space (28124905472 B)
[2025-10-11 20:46:54] 2025-10-12 00:45:57,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:46:54] 2025-10-12 00:45:57,206 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:46:54] 2025-10-12 00:45:57,206 | INFO     | update_server=False
[2025-10-11 20:46:54] 2025-10-12 00:45:57,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:46:54] 2025-10-12 00:45:57,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:46:54] 2025-10-12 00:45:57,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:46:54] 2025-10-12 00:45:57,207 | INFO     | aborting loop
[2025-10-11 20:46:54] 2025-10-12 00:45:57,404 | INFO     | all data control threads have been joined
[2025-10-11 20:46:54] 2025-10-12 00:45:58,174 | INFO     | all payload control threads have been joined
[2025-10-11 20:46:54] 2025-10-12 00:45:58,175 | INFO     | all job control threads have been joined
[2025-10-11 20:46:54] 2025-10-12 00:45:58,211 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:58,212 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:58,212 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:58,409 | INFO     | [data] control thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:58,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:46:54] 2025-10-12 00:45:58,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:58,746 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:59,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:46:54] 2025-10-12 00:45:59,180 | INFO     | [payload] control thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:59,181 | INFO     | [job] control thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:59,248 | INFO     | [job] validate thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:59,256 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:59,258 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:59,271 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:59,640 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:45:59,745 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:46:00,518 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:46:03,052 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:46:54] 2025-10-12 00:46:27,137 | INFO     | PID=31033 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 20:46:54] 2025-10-12 00:46:27,138 | INFO     | .. there are 3 such processes running
[2025-10-11 20:46:54] 2025-10-12 00:46:27,138 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:46:54] 2025-10-12 00:46:27,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:46:54] 2025-10-12 00:46:27,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:46:54] 2025-10-12 00:46:47,511 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:46:54] 2025-10-12 00:46:49,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474221909824)>', '<ExcThread(monitor, started 140473784055552)>']
[2025-10-11 20:46:54] 2025-10-12 00:46:50,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:46:54] 2025-10-12 00:46:50,267 | INFO     | [monitor] control thread has ended
[2025-10-11 20:46:54] 2025-10-12 00:46:54,574 | INFO     | all workflow threads have been joined
[2025-10-11 20:46:54] 2025-10-12 00:46:54,574 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:46:54] 2025-10-12 00:46:54,574 | INFO     | traces error code: 0
[2025-10-11 20:46:54] 2025-10-12 00:46:54,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:46:54] 2025-10-12 00:46:54,704 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:46:54] 2025-10-12 00:46:54,707 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:46:54] 2025-10-12 00:46:54,710 [wrapper] pilotpid: 31033
[2025-10-11 20:46:54] 2025-10-12 00:46:54,713 [wrapper] Pilot exit status: 0
[2025-10-11 20:46:54] 2025-10-12 00:46:54,724 [wrapper] pandaids: 6838632920
[2025-10-11 20:46:54] 2025-10-12 00:46:54,754 [wrapper] cleanup supervisor_pilot 24974 31034
[2025-10-11 20:46:54] 2025-10-12 00:46:54,759 [wrapper] Test setup, not cleaning
[2025-10-11 20:46:54] 2025-10-12 00:46:54,761 [wrapper] apfmon messages muted
[2025-10-11 20:46:54] 2025-10-12 00:46:54,764 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:46:54] 2025-10-12 00:46:54,766 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:46:54]  *** Error codes and diagnostics ***
[2025-10-11 20:46:54]     "exeErrorCode": 0,
[2025-10-11 20:46:54]     "exeErrorDiag": "",
[2025-10-11 20:46:54]     "pilotErrorCode": 0,
[2025-10-11 20:46:54]     "pilotErrorDiag": "",
[2025-10-11 20:46:54]  *** Listing of results directory ***
[2025-10-11 20:46:54] total 413660
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 12:20 pilot3.tar.gz
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 12:33 queuedata.json
[2025-10-11 20:46:54] -rwx------ 1 boincer umatlas     36292 Oct 11 12:34 runpilot2-wrapper.sh
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas       100 Oct 11 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:46:54] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 17:34 run_atlas
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas       105 Oct 11 17:34 job.xml
[2025-10-11 20:46:54] -rw-r--r-- 2 boincer umatlas 219736263 Oct 11 17:34 EVNT.46676267._002455.pool.root.1
[2025-10-11 20:46:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:34 start_atlas.sh
[2025-10-11 20:46:54] drwxrwx--x 2 boincer umatlas      4096 Oct 11 17:34 shared
[2025-10-11 20:46:54] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 17:34 input.tar.gz
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas         0 Oct 11 17:34 boinc_lockfile
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 17:34 pandaJob.out
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas    975528 Oct 11 17:34 agis_schedconf.cvmfs.json
[2025-10-11 20:46:54] drwx------ 5 boincer umatlas      4096 Oct 11 17:34 pilot3
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas      5951 Oct 11 20:37 init_data.xml
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas 195888395 Oct 11 20:45 HITS.46676269._061129.pool.root.1
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas        95 Oct 11 20:45 pilot_heartbeat.json
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas       531 Oct 11 20:45 boinc_task_state.xml
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas      1054 Oct 11 20:45 memory_monitor_summary.json
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas   1560580 Oct 11 20:45 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas    420071 Oct 11 20:45 log.46676269._061129.job.log.tgz.1
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas      7858 Oct 11 20:45 heartbeat.json
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas        28 Oct 11 20:46 wrapper_checkpoint.txt
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 20:46 boinc_mmap_file
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas      4821 Oct 11 20:46 pilotlog.txt
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas   1608493 Oct 11 20:46 log.46676269._061129.job.log.1
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas       357 Oct 11 20:46 output.list
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas       620 Oct 11 20:46 runtime_log
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas   2048000 Oct 11 20:46 result.tar.gz
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 20:46 runtime_log.err
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas       661 Oct 11 20:46 cJ1LDmvirR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmKFSMDmkQBOBo.diag
[2025-10-11 20:46:54] -rw-r--r-- 1 boincer umatlas     20867 Oct 11 20:46 stderr.txt
[2025-10-11 20:46:54] HITS file was successfully produced:
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas 195888395 Oct 11 20:45 shared/HITS.pool.root.1
[2025-10-11 20:46:54]  *** Contents of shared directory: ***
[2025-10-11 20:46:54] total 408472
[2025-10-11 20:46:54] -rw-r--r-- 2 boincer umatlas 219736263 Oct 11 17:34 ATLAS.root_0
[2025-10-11 20:46:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:34 start_atlas.sh
[2025-10-11 20:46:54] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 17:34 input.tar.gz
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas 195888395 Oct 11 20:45 HITS.pool.root.1
[2025-10-11 20:46:54] -rw------- 1 boincer umatlas   2048000 Oct 11 20:46 result.tar.gz
20:46:56 (27348): run_atlas exited; CPU time 86599.433051
20:46:56 (27348): called boinc_finish(0)

</stderr_txt>
]]>

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