Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:35:54 (6958): wrapper (7.7.26015): starting
17:35:54 (6958): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:35:54] Arguments: --nthreads 8
[2025-10-11 17:35:54] Threads: 8
[2025-10-11 17:35:54] Checking for CVMFS
[2025-10-11 17:35:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:35:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:35:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:35:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:35:54] 2.11.2.0 3733 52007 124360 151597 0 57 14455931 18432001 1833 130560 0 46135670 99.974 2350852 39220 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:35:54] CVMFS is ok
[2025-10-11 17:35:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:35:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:35:54] Further information can be found at the LHC@home message board.
[2025-10-11 17:35:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:35:54] Checking for apptainer binary...
[2025-10-11 17:35:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:35:54] Running /usr/bin/apptainer --version
[2025-10-11 17:35:54] apptainer version 1.3.2-1.el7
[2025-10-11 17:35:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:35:55] c-206-23.aglt2.org
[2025-10-11 17:35:55] apptainer works
[2025-10-11 17:35:55] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:35:55] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:35:55] Starting ATLAS job with PandaID=6836604934
[2025-10-11 17:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:34:28]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:34:28] 2025-10-12 00:33:43,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:34:28] 2025-10-12 00:33:43,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:34:28] 2025-10-12 00:33:43,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:34:28] 2025-10-12 00:33:43,249 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:34:28] 2025-10-12 00:33:43,249 | INFO     | sum of square deviations: 1661798600.0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,250 | INFO     | sum of deviations: -11765694639.999996
[2025-10-11 20:34:28] 2025-10-12 00:33:43,250 | INFO     | mean x: 1760223897.0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,250 | INFO     | mean y: 2488768.274285714
[2025-10-11 20:34:28] 2025-10-12 00:33:43,250 | INFO     | -- intersect: 12465044020.236109
[2025-10-11 20:34:28] 2025-10-12 00:33:43,250 | INFO     | intersect: 12465044020.236109
[2025-10-11 20:34:28] 2025-10-12 00:33:43,251 | INFO     | chi2: 2.285919627734999
[2025-10-11 20:34:28] 2025-10-12 00:33:43,251 | INFO     | sum of square deviations: 1523386702.5
[2025-10-11 20:34:28] 2025-10-12 00:33:43,252 | INFO     | sum of deviations: -59337018.00000102
[2025-10-11 20:34:28] 2025-10-12 00:33:43,252 | INFO     | mean x: 1760223744.5
[2025-10-11 20:34:28] 2025-10-12 00:33:43,252 | INFO     | mean y: 2501372.305882353
[2025-10-11 20:34:28] 2025-10-12 00:33:43,252 | INFO     | -- intersect: 71063365.02908304
[2025-10-11 20:34:28] 2025-10-12 00:33:43,252 | INFO     | intersect: 71063365.02908304
[2025-10-11 20:34:28] 2025-10-12 00:33:43,253 | INFO     | chi2: 1.519715875254473
[2025-10-11 20:34:28] 2025-10-12 00:33:43,253 | INFO     | current chi2=1.519715875254473 (change=33.51840297376151 %)
[2025-10-11 20:34:28] 2025-10-12 00:33:43,253 | INFO     | sum of square deviations: 1392881930.0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,254 | INFO     | sum of deviations: -88050327.99999715
[2025-10-11 20:34:28] 2025-10-12 00:33:43,254 | INFO     | mean x: 1760223592.0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,254 | INFO     | mean y: 2501338.793939394
[2025-10-11 20:34:28] 2025-10-12 00:33:43,254 | INFO     | -- intersect: 113772984.50258404
[2025-10-11 20:34:28] 2025-10-12 00:33:43,254 | INFO     | intersect: 113772984.50258404
[2025-10-11 20:34:28] 2025-10-12 00:33:43,254 | INFO     | chi2: 1.519621498217924
[2025-10-11 20:34:28] 2025-10-12 00:33:43,254 | INFO     | current chi2=1.519621498217924 (change=0.006210176394540079 %)
[2025-10-11 20:34:28] 2025-10-12 00:33:43,255 | INFO     | right removable region: 164
[2025-10-11 20:34:28] 2025-10-12 00:33:43,255 | INFO     | sum of square deviations: 1523386702.5
[2025-10-11 20:34:28] 2025-10-12 00:33:43,256 | INFO     | sum of deviations: -36076030587.500015
[2025-10-11 20:34:28] 2025-10-12 00:33:43,256 | INFO     | mean x: 1760224049.5
[2025-10-11 20:34:28] 2025-10-12 00:33:43,256 | INFO     | mean y: 2515180.594117647
[2025-10-11 20:34:28] 2025-10-12 00:33:43,256 | INFO     | -- intersect: 41687201377.738556
[2025-10-11 20:34:28] 2025-10-12 00:33:43,256 | INFO     | intersect: 41687201377.738556
[2025-10-11 20:34:28] 2025-10-12 00:33:43,256 | INFO     | chi2: 0.9524029662142419
[2025-10-11 20:34:28] 2025-10-12 00:33:43,256 | INFO     | current chi2=0.9524029662142419 (change=58.3361131923116 %)
[2025-10-11 20:34:28] 2025-10-12 00:33:43,257 | INFO     | sum of square deviations: 1392881930.0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,257 | INFO     | sum of deviations: -34336427677.0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,257 | INFO     | mean x: 1760224202.0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,258 | INFO     | mean y: 2513082.4060606062
[2025-10-11 20:34:28] 2025-10-12 00:33:43,258 | INFO     | -- intersect: 43394425710.11747
[2025-10-11 20:34:28] 2025-10-12 00:33:43,258 | INFO     | intersect: 43394425710.11747
[2025-10-11 20:34:28] 2025-10-12 00:33:43,258 | INFO     | chi2: 0.9370507600192738
[2025-10-11 20:34:28] 2025-10-12 00:33:43,258 | INFO     | current chi2=0.9370507600192738 (change=1.6119443911428004 %)
[2025-10-11 20:34:28] 2025-10-12 00:33:43,258 | INFO     | left removable region: 20
[2025-10-11 20:34:28] 2025-10-12 00:33:43,259 | INFO     | sum of square deviations: 925859220.0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,259 | INFO     | sum of deviations: -12047281010.000002
[2025-10-11 20:34:28] 2025-10-12 00:33:43,259 | INFO     | mean x: 1760224171.5
[2025-10-11 20:34:28] 2025-10-12 00:33:43,259 | INFO     | mean y: 2513531.4583333335
[2025-10-11 20:34:28] 2025-10-12 00:33:43,259 | INFO     | -- intersect: 22906552046.79
[2025-10-11 20:34:28] 2025-10-12 00:33:43,260 | INFO     | intersect: 22906552046.79
[2025-10-11 20:34:28] 2025-10-12 00:33:43,260 | INFO     | chi2: 0.10976683116212854
[2025-10-11 20:34:28] 2025-10-12 00:33:43,260 | INFO     | -- intersect: 22906552046.79
[2025-10-11 20:34:28] 2025-10-12 00:33:43,260 | INFO     | current memory leak: -13.01 B/s (using 144 data points, chi2=0.11)
[2025-10-11 20:34:28] 2025-10-12 00:33:43,260 | INFO     | could have reported an average CPU frequency of 2546 MHz (9 samples)
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | ..............................
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | . Timing measurements:
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | . get job = 0 s
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | . initial setup = 2 s
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | . payload setup = 4 s
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | . stage-in = 0 s
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | . payload execution = 10627 s
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | . stage-out = 1 s
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | . log creation = 0 s
[2025-10-11 20:34:28] 2025-10-12 00:33:43,261 | INFO     | ..............................
[2025-10-11 20:34:28] 2025-10-12 00:33:43,337 | INFO     | 
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | job summary report
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | --------------------------------------------------
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | PanDA job id: 6836604934
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | task id: 46676269
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | errors: (none)
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | pilot state: finished 
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | transexitcode: 0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | exeerrorcode: 0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | exeerrordiag: 
[2025-10-11 20:34:28] 2025-10-12 00:33:43,338 | INFO     | exitcode: 0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | exitmsg: OK
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | cpuconsumptiontime: 80673 s
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | nevents: 400
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | neventsw: 0
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | pid: 17161
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | pgrp: 17161
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | corecount: 8
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | event service: False
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | sizes: {0: 2348683, 1: 2348882, 4: 2349144, 12: 2349172, 10636: 2378216, 10637: 2387214, 10639: 2387398, 10642: 2387656}
[2025-10-11 20:34:28] 2025-10-12 00:33:43,339 | INFO     | --------------------------------------------------
[2025-10-11 20:34:28] 2025-10-12 00:33:43,340 | INFO     | 
[2025-10-11 20:34:28] 2025-10-12 00:33:43,340 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 20:34:28] 2025-10-12 00:33:43,354 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,354 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,354 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,354 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,355 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:34:28] 2025-10-12 00:33:43,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:34:28] 2025-10-12 00:33:43,356 | INFO     | job 6836604934 has completed (purged errors)
[2025-10-11 20:34:28] 2025-10-12 00:33:43,356 | INFO     | overall cleanup function is called
[2025-10-11 20:34:28] 2025-10-12 00:33:44,361 | INFO     | --- collectZombieJob: --- 10, [17161]
[2025-10-11 20:34:28] 2025-10-12 00:33:44,361 | INFO     | zombie collector waiting for pid 17161
[2025-10-11 20:34:28] 2025-10-12 00:33:44,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:34:28] 2025-10-12 00:33:44,361 | INFO     | collected zombie processes
[2025-10-11 20:34:28] 2025-10-12 00:33:44,361 | INFO     | will attempt to kill all subprocesses of pid=17161
[2025-10-11 20:34:28] 2025-10-12 00:33:44,523 | INFO     | process IDs to be killed: [17161] (in reverse order)
[2025-10-11 20:34:28] 2025-10-12 00:33:44,567 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:34:28] 2025-10-12 00:33:44,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:34:28] 2025-10-12 00:33:44,570 | INFO     | did not find any defunct processes belonging to 17161
[2025-10-11 20:34:28] 2025-10-12 00:33:44,573 | INFO     | did not find any defunct processes belonging to 17161
[2025-10-11 20:34:28] 2025-10-12 00:33:44,573 | INFO     | ready for new job
[2025-10-11 20:34:28] 2025-10-12 00:33:44,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:34:28] 2025-10-12 00:33:44,574 | INFO     | ***************************************
[2025-10-11 20:34:28] 2025-10-12 00:33:44,574 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:34:28] 2025-10-12 00:33:44,574 | INFO     | ***************************************
[2025-10-11 20:34:28] 2025-10-12 00:33:44,575 | INFO     | 
[2025-10-11 20:34:28] 2025-10-12 00:33:44,575 | INFO     | architecture information:
[2025-10-11 20:34:28] 2025-10-12 00:33:44,576 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:34:28] 2025-10-12 00:33:44,588 | INFO     | cat /etc/os-release:
[2025-10-11 20:34:28] NAME="CentOS Linux"
[2025-10-11 20:34:28] VERSION="7 (Core)"
[2025-10-11 20:34:28] ID="centos"
[2025-10-11 20:34:28] ID_LIKE="rhel fedora"
[2025-10-11 20:34:28] VERSION_ID="7"
[2025-10-11 20:34:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:34:28] ANSI_COLOR="0;31"
[2025-10-11 20:34:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:34:28] HOME_URL="https://www.centos.org/"
[2025-10-11 20:34:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:34:28] 
[2025-10-11 20:34:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:34:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:34:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:34:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:34:28] 
[2025-10-11 20:34:28] 2025-10-12 00:33:44,588 | INFO     | ***************************************
[2025-10-11 20:34:28] 2025-10-12 00:33:45,091 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 20:34:28] 2025-10-12 00:33:45,106 | INFO     | sufficient remaining disk space (28262268928 B)
[2025-10-11 20:34:28] 2025-10-12 00:33:45,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:34:28] 2025-10-12 00:33:45,107 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:34:28] 2025-10-12 00:33:45,107 | INFO     | update_server=False
[2025-10-11 20:34:28] 2025-10-12 00:33:45,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:34:28] 2025-10-12 00:33:45,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:34:28] 2025-10-12 00:33:45,303 | INFO     | all job control threads have been joined
[2025-10-11 20:34:28] 2025-10-12 00:33:45,599 | INFO     | all data control threads have been joined
[2025-10-11 20:34:28] 2025-10-12 00:33:45,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:34:28] 2025-10-12 00:33:45,716 | INFO     | aborting loop
[2025-10-11 20:34:28] 2025-10-12 00:33:45,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:34:28] 2025-10-12 00:33:46,113 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,113 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,265 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,268 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,312 | INFO     | [job] control thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,342 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,358 | INFO     | all payload control threads have been joined
[2025-10-11 20:34:28] 2025-10-12 00:33:46,374 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:34:28] 2025-10-12 00:33:46,605 | INFO     | [data] control thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,700 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,711 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:46,721 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:47,199 | INFO     | [job] validate thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:47,236 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:47,363 | INFO     | [payload] control thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:48,391 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:33:49,983 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:34:28] 2025-10-12 00:34:14,874 | INFO     | PID=10721 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 20:34:28] 2025-10-12 00:34:14,874 | INFO     | .. there are 3 such processes running
[2025-10-11 20:34:28] 2025-10-12 00:34:14,875 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:34:28] 2025-10-12 00:34:14,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:34:28] 2025-10-12 00:34:14,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:34:28] 2025-10-12 00:34:22,582 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:34:28] 2025-10-12 00:34:23,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258673227584)>', '<ExcThread(monitor, started 140258213598976)>']
[2025-10-11 20:34:28] 2025-10-12 00:34:23,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:34:28] 2025-10-12 00:34:23,921 | INFO     | [monitor] control thread has ended
[2025-10-11 20:34:28] 2025-10-12 00:34:28,419 | INFO     | all workflow threads have been joined
[2025-10-11 20:34:28] 2025-10-12 00:34:28,420 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:34:28] 2025-10-12 00:34:28,420 | INFO     | traces error code: 0
[2025-10-11 20:34:28] 2025-10-12 00:34:28,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:34:28] 2025-10-12 00:34:28,533 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:34:28] 2025-10-12 00:34:28,535 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:34:28] 2025-10-12 00:34:28,538 [wrapper] pilotpid: 10721
[2025-10-11 20:34:28] 2025-10-12 00:34:28,540 [wrapper] Pilot exit status: 0
[2025-10-11 20:34:28] 2025-10-12 00:34:28,549 [wrapper] pandaids: 6836604934
[2025-10-11 20:34:28] 2025-10-12 00:34:28,576 [wrapper] cleanup supervisor_pilot 11632 10722
[2025-10-11 20:34:28] 2025-10-12 00:34:28,579 [wrapper] Test setup, not cleaning
[2025-10-11 20:34:28] 2025-10-12 00:34:28,581 [wrapper] apfmon messages muted
[2025-10-11 20:34:28] 2025-10-12 00:34:28,583 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:34:28] 2025-10-12 00:34:28,585 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:34:28]  *** Error codes and diagnostics ***
[2025-10-11 20:34:28]     "exeErrorCode": 0,
[2025-10-11 20:34:28]     "exeErrorDiag": "",
[2025-10-11 20:34:28]     "pilotErrorCode": 0,
[2025-10-11 20:34:28]     "pilotErrorDiag": "",
[2025-10-11 20:34:28]  *** Listing of results directory ***
[2025-10-11 20:34:28] total 413968
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-11 20:34:28] -rwx------ 1 boincer umatlas     36292 Oct  8 19:15 runpilot2-wrapper.sh
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas      5112 Oct  8 19:15 queuedata.json
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas       100 Oct 11 17:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:34:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 17:35 run_atlas
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas       105 Oct 11 17:35 job.xml
[2025-10-11 20:34:28] -rw-r--r-- 2 boincer umatlas 221016147 Oct 11 17:35 EVNT.46676267._000428.pool.root.1
[2025-10-11 20:34:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:35 start_atlas.sh
[2025-10-11 20:34:28] drwxrwx--x 2 boincer umatlas      4096 Oct 11 17:35 shared
[2025-10-11 20:34:28] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 17:35 input.tar.gz
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas         0 Oct 11 17:35 boinc_lockfile
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 17:35 pandaJob.out
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas    975528 Oct 11 17:36 agis_schedconf.cvmfs.json
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas   1560580 Oct 11 17:36 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:34:28] drwx------ 5 boincer umatlas      4096 Oct 11 17:36 pilot3
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 20:28 init_data.xml
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas       531 Oct 11 20:33 boinc_task_state.xml
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas 195183142 Oct 11 20:33 HITS.46676269._010522.pool.root.1
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas      1056 Oct 11 20:33 memory_monitor_summary.json
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas    402435 Oct 11 20:33 log.46676269._010522.job.log.tgz.1
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas      7857 Oct 11 20:33 heartbeat.json
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas        95 Oct 11 20:34 pilot_heartbeat.json
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas        28 Oct 11 20:34 wrapper_checkpoint.txt
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 20:34 boinc_mmap_file
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas      4821 Oct 11 20:34 pilotlog.txt
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas   1498058 Oct 11 20:34 log.46676269._010522.job.log.1
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas       357 Oct 11 20:34 output.list
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas       620 Oct 11 20:34 runtime_log
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas   1914880 Oct 11 20:34 result.tar.gz
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 20:34 runtime_log.err
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas       662 Oct 11 20:34 FAYNDmYYsQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmImYNDmJkv7fn.diag
[2025-10-11 20:34:28] -rw-r--r-- 1 boincer umatlas     20863 Oct 11 20:34 stderr.txt
[2025-10-11 20:34:28] HITS file was successfully produced:
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas 195183142 Oct 11 20:33 shared/HITS.pool.root.1
[2025-10-11 20:34:28]  *** Contents of shared directory: ***
[2025-10-11 20:34:28] total 408904
[2025-10-11 20:34:28] -rw-r--r-- 2 boincer umatlas 221016147 Oct 11 17:35 ATLAS.root_0
[2025-10-11 20:34:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:35 start_atlas.sh
[2025-10-11 20:34:28] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 17:35 input.tar.gz
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas 195183142 Oct 11 20:33 HITS.pool.root.1
[2025-10-11 20:34:28] -rw------- 1 boincer umatlas   1914880 Oct 11 20:34 result.tar.gz
20:34:30 (6958): run_atlas exited; CPU time 80815.399920
20:34:30 (6958): called boinc_finish(0)

</stderr_txt>
]]>

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