Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:20:12 (2586587): wrapper (7.7.26015): starting
23:20:12 (2586587): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 23:20:12] Arguments: --nthreads 8
[2025-10-11 23:20:12] Threads: 8
[2025-10-11 23:20:12] Checking for CVMFS
[2025-10-11 23:20:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:20:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:20:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:20:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:20:16] 2.13.2.0 5698 4932 161988 151604 0 521 27608119 32935937 30378 16776704 0 12693040 99.655 10739905 27133 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 23:20:16] CVMFS is ok
[2025-10-11 23:20:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:20:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:20:16] Further information can be found at the LHC@home message board.
[2025-10-11 23:20:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:20:16] Checking for apptainer binary...
[2025-10-11 23:20:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:20:16] Running /usr/bin/apptainer --version
[2025-10-11 23:20:16] apptainer version 1.4.3-1.el9
[2025-10-11 23:20:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:20:18] c-6-4.aglt2.org
[2025-10-11 23:20:18] apptainer works
[2025-10-11 23:20:18] Set ATHENA_PROC_NUMBER=8
[2025-10-11 23:20:18] Set ATHENA_CORE_NUMBER=8
[2025-10-11 23:20:18] Starting ATLAS job with PandaID=6838633098
[2025-10-11 23:20:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:30:55]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:30:55] 2025-10-12 22:29:46,350 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 18:30:55] 2025-10-12 22:29:46,359 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.176000000002
[2025-10-12 18:30:55] 2025-10-12 22:29:46,376 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838633098/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:30:55] 2025-10-12 22:29:46,377 | INFO     | extracted standard info from prmon json
[2025-10-12 18:30:55] 2025-10-12 22:29:46,377 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:30:55] 2025-10-12 22:29:46,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:30:55] 2025-10-12 22:29:46,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:30:55] 2025-10-12 22:29:46,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:30:55] 2025-10-12 22:29:46,418 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:30:55] 2025-10-12 22:29:46,423 | INFO     | sum of square deviations: 442668637505.40967
[2025-10-12 18:30:55] 2025-10-12 22:29:46,488 | INFO     | sum of deviations: -21473459466.550537
[2025-10-12 18:30:55] 2025-10-12 22:29:46,489 | INFO     | mean x: 1760273736.9520426
[2025-10-12 18:30:55] 2025-10-12 22:29:46,489 | INFO     | mean y: 2056562.3046181172
[2025-10-12 18:30:55] 2025-10-12 22:29:46,489 | INFO     | -- intersect: 87445866.03637663
[2025-10-12 18:30:55] 2025-10-12 22:29:46,489 | INFO     | intersect: 87445866.03637663
[2025-10-12 18:30:55] 2025-10-12 22:29:46,491 | INFO     | chi2: 5.53247698933475
[2025-10-12 18:30:55] 2025-10-12 22:29:46,492 | INFO     | sum of square deviations: 436797733831.88403
[2025-10-12 18:30:55] 2025-10-12 22:29:46,559 | INFO     | sum of deviations: 111709207955.98111
[2025-10-12 18:30:55] 2025-10-12 22:29:46,560 | INFO     | mean x: 1760273584.454059
[2025-10-12 18:30:55] 2025-10-12 22:29:46,560 | INFO     | mean y: 2060014.4656556647
[2025-10-12 18:30:55] 2025-10-12 22:29:46,560 | INFO     | -- intersect: -448122650.58654356
[2025-10-12 18:30:55] 2025-10-12 22:29:46,560 | INFO     | intersect: -448122650.58654356
[2025-10-12 18:30:55] 2025-10-12 22:29:46,561 | INFO     | chi2: 4.192456308804568
[2025-10-12 18:30:55] 2025-10-12 22:29:46,562 | INFO     | current chi2=4.192456308804568 (change=24.2209896781028 %)
[2025-10-12 18:30:55] 2025-10-12 22:29:46,562 | INFO     | right removable region: 1120
[2025-10-12 18:30:55] 2025-10-12 22:29:46,567 | INFO     | sum of square deviations: 436797560347.6961
[2025-10-12 18:30:55] 2025-10-12 22:29:46,639 | INFO     | sum of deviations: -210209126181.3191
[2025-10-12 18:30:55] 2025-10-12 22:29:46,640 | INFO     | mean x: 1760273889.4522748
[2025-10-12 18:30:55] 2025-10-12 22:29:46,640 | INFO     | mean y: 2061458.517395183
[2025-10-12 18:30:55] 2025-10-12 22:29:46,640 | INFO     | -- intersect: 849194477.8662435
[2025-10-12 18:30:55] 2025-10-12 22:29:46,640 | INFO     | intersect: 849194477.8662435
[2025-10-12 18:30:55] 2025-10-12 22:29:46,646 | INFO     | chi2: 3.6850902396038387
[2025-10-12 18:30:55] 2025-10-12 22:29:46,646 | INFO     | current chi2=3.6850902396038387 (change=33.3916752530958 %)
[2025-10-12 18:30:55] 2025-10-12 22:29:46,648 | INFO     | sum of square deviations: 430978624190.4841
[2025-10-12 18:30:55] 2025-10-12 22:29:47,187 | INFO     | sum of deviations: -257182648480.88516
[2025-10-12 18:30:55] 2025-10-12 22:29:47,187 | INFO     | mean x: 1760274041.952509
[2025-10-12 18:30:55] 2025-10-12 22:29:47,187 | INFO     | mean y: 2062687.5304659498
[2025-10-12 18:30:55] 2025-10-12 22:29:47,187 | INFO     | -- intersect: 1052490515.62017
[2025-10-12 18:30:55] 2025-10-12 22:29:47,187 | INFO     | intersect: 1052490515.62017
[2025-10-12 18:30:55] 2025-10-12 22:29:47,241 | INFO     | chi2: 3.5373986941598687
[2025-10-12 18:30:55] 2025-10-12 22:29:47,241 | INFO     | current chi2=3.5373986941598687 (change=4.0078135361984355 %)
[2025-10-12 18:30:55] 2025-10-12 22:29:47,241 | INFO     | left removable region: 20
[2025-10-12 18:30:55] 2025-10-12 22:29:47,243 | INFO     | sum of square deviations: 412706178248.44666
[2025-10-12 18:30:55] 2025-10-12 22:29:47,445 | INFO     | time since job start (68888s) is within the limit (172800.0s)
[2025-10-12 18:30:55] 2025-10-12 22:29:47,918 | INFO     | sum of deviations: -33302518900.108204
[2025-10-12 18:30:55] 2025-10-12 22:29:47,919 | INFO     | mean x: 1760274163.9518182
[2025-10-12 18:30:55] 2025-10-12 22:29:47,919 | INFO     | mean y: 2064165.979090909
[2025-10-12 18:30:55] 2025-10-12 22:29:47,919 | INFO     | -- intersect: 144106051.23307845
[2025-10-12 18:30:55] 2025-10-12 22:29:47,919 | INFO     | intersect: 144106051.23307845
[2025-10-12 18:30:55] 2025-10-12 22:29:47,930 | INFO     | chi2: 2.0075335540144397
[2025-10-12 18:30:55] 2025-10-12 22:29:47,930 | INFO     | -- intersect: 144106051.23307845
[2025-10-12 18:30:55] 2025-10-12 22:29:47,930 | INFO     | current memory leak: -0.08 B/s (using 1100 data points, chi2=2.01)
[2025-10-12 18:30:55] 2025-10-12 22:29:47,931 | INFO     | could have reported an average CPU frequency of 2601 MHz (40 samples)
[2025-10-12 18:30:55] 2025-10-12 22:29:47,932 | INFO     | ..............................
[2025-10-12 18:30:55] 2025-10-12 22:29:47,932 | INFO     | . Timing measurements:
[2025-10-12 18:30:55] 2025-10-12 22:29:47,932 | INFO     | . get job = 1 s
[2025-10-12 18:30:55] 2025-10-12 22:29:47,932 | INFO     | . initial setup = 8 s
[2025-10-12 18:30:55] 2025-10-12 22:29:47,932 | INFO     | . payload setup = 37 s
[2025-10-12 18:30:55] 2025-10-12 22:29:47,932 | INFO     | . stage-in = 0 s
[2025-10-12 18:30:55] 2025-10-12 22:29:47,932 | INFO     | . payload execution = 68708 s
[2025-10-12 18:30:55] 2025-10-12 22:29:47,932 | INFO     | . stage-out = 9 s
[2025-10-12 18:30:55] 2025-10-12 22:29:47,932 | INFO     | . log creation = 2 s
[2025-10-12 18:30:55] 2025-10-12 22:29:47,933 | INFO     | ..............................
[2025-10-12 18:30:55] 2025-10-12 22:29:49,910 | INFO     | 
[2025-10-12 18:30:55] 2025-10-12 22:29:49,911 | INFO     | job summary report
[2025-10-12 18:30:55] 2025-10-12 22:29:49,911 | INFO     | --------------------------------------------------
[2025-10-12 18:30:55] 2025-10-12 22:29:49,911 | INFO     | PanDA job id: 6838633098
[2025-10-12 18:30:55] 2025-10-12 22:29:49,911 | INFO     | task id: 46676269
[2025-10-12 18:30:55] 2025-10-12 22:29:49,911 | INFO     | errors: (none)
[2025-10-12 18:30:55] 2025-10-12 22:29:49,911 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:30:55] 2025-10-12 22:29:49,911 | INFO     | pilot state: finished 
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | transexitcode: 0
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | exeerrorcode: 0
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | exeerrordiag: 
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | exitcode: 0
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | exitmsg: OK
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | cpuconsumptiontime: 50368 s
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | nevents: 400
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | neventsw: 0
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | pid: 2599676
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | pgrp: 2599676
[2025-10-12 18:30:55] 2025-10-12 22:29:49,912 | INFO     | corecount: 8
[2025-10-12 18:30:55] 2025-10-12 22:29:49,913 | INFO     | event service: False
[2025-10-12 18:30:55] 2025-10-12 22:29:49,913 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348885, 3: 2348941, 14: 2348941, 25: 2348969, 30: 2349387, 37: 2349415, 68753: 2402865, 68755: 2402864, 68765: 2412254, 68829: 
[2025-10-12 18:30:55] 2025-10-12 22:29:49,913 | INFO     | --------------------------------------------------
[2025-10-12 18:30:55] 2025-10-12 22:29:49,913 | INFO     | 
[2025-10-12 18:30:55] 2025-10-12 22:29:49,913 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:30:55] 2025-10-12 22:29:50,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,228 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,228 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,228 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:30:55] 2025-10-12 22:29:50,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:30:55] 2025-10-12 22:29:50,238 | INFO     | job 6838633098 has completed (purged errors)
[2025-10-12 18:30:55] 2025-10-12 22:29:50,238 | INFO     | overall cleanup function is called
[2025-10-12 18:30:55] 2025-10-12 22:29:51,451 | INFO     | --- collectZombieJob: --- 10, [2599676]
[2025-10-12 18:30:55] 2025-10-12 22:29:51,452 | INFO     | zombie collector waiting for pid 2599676
[2025-10-12 18:30:55] 2025-10-12 22:29:51,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:30:55] 2025-10-12 22:29:51,452 | INFO     | collected zombie processes
[2025-10-12 18:30:55] 2025-10-12 22:29:51,452 | INFO     | will attempt to kill all subprocesses of pid=2599676
[2025-10-12 18:30:55] 2025-10-12 22:29:54,389 | INFO     | PID=2591271 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:30:55] 2025-10-12 22:29:54,389 | INFO     | .. there are 33 such processes running
[2025-10-12 18:30:55] 2025-10-12 22:29:55,255 | INFO     | process IDs to be killed: [2599676] (in reverse order)
[2025-10-12 18:30:55] 2025-10-12 22:29:56,094 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:30:55] 2025-10-12 22:29:56,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:30:55] 2025-10-12 22:29:56,263 | INFO     | did not find any defunct processes belonging to 2599676
[2025-10-12 18:30:55] 2025-10-12 22:29:56,372 | INFO     | did not find any defunct processes belonging to 2599676
[2025-10-12 18:30:55] 2025-10-12 22:29:56,373 | INFO     | ready for new job
[2025-10-12 18:30:55] 2025-10-12 22:29:56,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:30:55] 2025-10-12 22:29:56,386 | INFO     | ***************************************
[2025-10-12 18:30:55] 2025-10-12 22:29:56,386 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:30:55] 2025-10-12 22:29:56,386 | INFO     | ***************************************
[2025-10-12 18:30:55] 2025-10-12 22:29:56,387 | INFO     | 
[2025-10-12 18:30:55] 2025-10-12 22:29:56,405 | INFO     | architecture information:
[2025-10-12 18:30:55] 2025-10-12 22:29:56,405 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:30:55] 2025-10-12 22:29:56,466 | INFO     | cat /etc/os-release:
[2025-10-12 18:30:55] NAME="CentOS Linux"
[2025-10-12 18:30:55] VERSION="7 (Core)"
[2025-10-12 18:30:55] ID="centos"
[2025-10-12 18:30:55] ID_LIKE="rhel fedora"
[2025-10-12 18:30:55] VERSION_ID="7"
[2025-10-12 18:30:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:30:55] ANSI_COLOR="0;31"
[2025-10-12 18:30:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:30:55] HOME_URL="https://www.centos.org/"
[2025-10-12 18:30:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:30:55] 
[2025-10-12 18:30:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:30:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:30:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:30:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:30:55] 
[2025-10-12 18:30:55] 2025-10-12 22:29:56,466 | INFO     | ***************************************
[2025-10-12 18:30:55] 2025-10-12 22:29:56,970 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:30:55] 2025-10-12 22:29:57,002 | INFO     | sufficient remaining disk space (74987864064 B)
[2025-10-12 18:30:55] 2025-10-12 22:29:57,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:30:55] 2025-10-12 22:29:57,003 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:30:55] 2025-10-12 22:29:57,003 | INFO     | update_server=False
[2025-10-12 18:30:55] 2025-10-12 22:29:57,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:30:55] 2025-10-12 22:29:57,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:30:55] 2025-10-12 22:29:57,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:30:55] 2025-10-12 22:29:57,004 | INFO     | aborting loop
[2025-10-12 18:30:55] 2025-10-12 22:29:57,051 | INFO     | all payload control threads have been joined
[2025-10-12 18:30:55] 2025-10-12 22:29:57,596 | INFO     | all data control threads have been joined
[2025-10-12 18:30:55] 2025-10-12 22:29:58,019 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:58,019 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:58,058 | INFO     | [payload] control thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:58,203 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:58,217 | INFO     | [job] validate thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:58,222 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:58,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:30:55] 2025-10-12 22:29:58,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:58,267 | INFO     | all job control threads have been joined
[2025-10-12 18:30:55] 2025-10-12 22:29:58,603 | INFO     | [data] control thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:58,791 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:58,987 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:59,105 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:59,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:30:55] 2025-10-12 22:29:59,251 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:29:59,274 | INFO     | [job] control thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:30:00,165 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:30:00,252 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:30:01,025 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:30:55] 2025-10-12 22:30:11,649 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:30:55] 2025-10-12 22:30:11,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900312000320)>', '<ExcThread(monitor, started 139899659331328)>']
[2025-10-12 18:30:55] 2025-10-12 22:30:16,728 | INFO     | all workflow threads have been joined
[2025-10-12 18:30:55] 2025-10-12 22:30:16,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:30:55] 2025-10-12 22:30:16,729 | INFO     | traces error code: 0
[2025-10-12 18:30:55] 2025-10-12 22:30:16,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:30:55] 2025-10-12 22:30:31,800 | INFO     | PID=2591271 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:30:55] 2025-10-12 22:30:31,801 | INFO     | .. there are 33 such processes running
[2025-10-12 18:30:55] 2025-10-12 22:30:31,801 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:30:55] 2025-10-12 22:30:31,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:30:55] 2025-10-12 22:30:31,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:30:55] 2025-10-12 22:30:31,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:30:55] 2025-10-12 22:30:31,802 | INFO     | [monitor] control thread has ended
[2025-10-12 18:30:55] 2025-10-12 22:30:33,485 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:30:55] 2025-10-12 22:30:33,530 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:30:55] 2025-10-12 22:30:33,574 [wrapper] pilotpid: 2591271
[2025-10-12 18:30:55] 2025-10-12 22:30:33,605 [wrapper] Pilot exit status: 0
[2025-10-12 18:30:55] 2025-10-12 22:30:33,842 [wrapper] pandaids: 6838633098
[2025-10-12 18:30:55] 2025-10-12 22:30:34,338 [wrapper] cleanup supervisor_pilot 1928385 2591272
[2025-10-12 18:30:55] 2025-10-12 22:30:34,349 [wrapper] Test setup, not cleaning
[2025-10-12 18:30:55] 2025-10-12 22:30:34,364 [wrapper] apfmon messages muted
[2025-10-12 18:30:55] 2025-10-12 22:30:34,396 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:30:55] 2025-10-12 22:30:34,461 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:30:55]  *** Error codes and diagnostics ***
[2025-10-12 18:30:55]     "exeErrorCode": 0,
[2025-10-12 18:30:55]     "exeErrorDiag": "",
[2025-10-12 18:30:55]     "pilotErrorCode": 0,
[2025-10-12 18:30:55]     "pilotErrorDiag": "",
[2025-10-12 18:30:55]  *** Listing of results directory ***
[2025-10-12 18:30:55] total 428316
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 12:20 pilot3.tar.gz
[2025-10-12 18:30:55] -rwx------. 1 boincer umatlas     36292 Oct 11 12:45 runpilot2-wrapper.sh
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 12:45 queuedata.json
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas       100 Oct 11 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:30:55] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 23:20 run_atlas
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas       105 Oct 11 23:20 job.xml
[2025-10-12 18:30:55] -rw-r--r--. 2 boincer umatlas 220230111 Oct 11 23:20 EVNT.46676267._002462.pool.root.1
[2025-10-12 18:30:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:20 start_atlas.sh
[2025-10-12 18:30:55] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 23:20 shared
[2025-10-12 18:30:55] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 23:20 input.tar.gz
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas         0 Oct 11 23:20 boinc_lockfile
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 23:20 pandaJob.out
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas    975512 Oct 11 23:21 agis_schedconf.cvmfs.json
[2025-10-12 18:30:55] drwx------. 5 boincer umatlas      4096 Oct 11 23:21 pilot3
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas 198630215 Oct 12 18:25 HITS.46676269._061307.pool.root.1
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas       531 Oct 12 18:25 boinc_task_state.xml
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas      1043 Oct 12 18:28 memory_monitor_summary.json
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas   1025578 Oct 12 18:28 log.46676269._061307.job.log.tgz.1
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas      6655 Oct 12 18:29 init_data.xml
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas        95 Oct 12 18:29 pilot_heartbeat.json
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas      7824 Oct 12 18:29 heartbeat.json
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas       823 Oct 12 18:30 pilotlog.txt
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas   6887273 Oct 12 18:30 log.46676269._061307.job.log.1
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas       357 Oct 12 18:30 output.list
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:30 runtime_log
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas   7936000 Oct 12 18:30 result.tar.gz
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 18:30 runtime_log.err
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas       654 Oct 12 18:30 eDCMDmutrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmk0gNDmEu56rn.diag
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:30 boinc_mmap_file
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas     21306 Oct 12 18:30 stderr.txt
[2025-10-12 18:30:55] -rw-r--r--. 1 boincer umatlas        28 Oct 12 18:30 wrapper_checkpoint.txt
[2025-10-12 18:30:55] HITS file was successfully produced:
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas 198630215 Oct 12 18:25 shared/HITS.pool.root.1
[2025-10-12 18:30:55]  *** Contents of shared directory: ***
[2025-10-12 18:30:55] total 417384
[2025-10-12 18:30:55] -rw-r--r--. 2 boincer umatlas 220230111 Oct 11 23:20 ATLAS.root_0
[2025-10-12 18:30:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:20 start_atlas.sh
[2025-10-12 18:30:55] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 23:20 input.tar.gz
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas 198630215 Oct 12 18:25 HITS.pool.root.1
[2025-10-12 18:30:55] -rw-------. 1 boincer umatlas   7936000 Oct 12 18:30 result.tar.gz
18:30:57 (2586587): run_atlas exited; CPU time 52999.991621
18:30:57 (2586587): called boinc_finish(0)

</stderr_txt>
]]>

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