Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:17:02 (2695742): wrapper (7.7.26015): starting
08:17:02 (2695742): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 08:17:02] Arguments: --nthreads 3
[2025-10-12 08:17:02] Threads: 3
[2025-10-12 08:17:02] Checking for CVMFS
[2025-10-12 08:17:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:17:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:17:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:17:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:17:02] 2.9.2.0 1545274 3950 84276 151611 2 16 31214945 36864001 0 130560 0 3022011 99.991 134758 869 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 08:17:02] CVMFS is ok
[2025-10-12 08:17:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:17:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:17:02] Further information can be found at the LHC@home message board.
[2025-10-12 08:17:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:17:02] Checking for apptainer binary...
[2025-10-12 08:17:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:17:02] Running /usr/bin/apptainer --version
[2025-10-12 08:17:02] apptainer version 1.4.1-1.1
[2025-10-12 08:17:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:17:02] atlasA223
[2025-10-12 08:17:02] apptainer works
[2025-10-12 08:17:02] Set ATHENA_PROC_NUMBER=3
[2025-10-12 08:17:02] Set ATHENA_CORE_NUMBER=3
[2025-10-12 08:17:02] Starting ATLAS job with PandaID=6838632416
[2025-10-12 08:17:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:43:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:43:30] 2025-10-12 07:42:58,508 | INFO     | ready for new job
[2025-10-12 09:43:30] 2025-10-12 07:42:58,508 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:43:30] 2025-10-12 07:42:58,509 | INFO     | ***************************************
[2025-10-12 09:43:30] 2025-10-12 07:42:58,509 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:43:30] 2025-10-12 07:42:58,509 | INFO     | ***************************************
[2025-10-12 09:43:30] 2025-10-12 07:42:58,509 | INFO     | 
[2025-10-12 09:43:30] 2025-10-12 07:42:58,510 | INFO     | architecture information:
[2025-10-12 09:43:30] 2025-10-12 07:42:58,510 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:43:30] 2025-10-12 07:42:58,519 | INFO     | cat /etc/os-release:
[2025-10-12 09:43:30] NAME="CentOS Linux"
[2025-10-12 09:43:30] VERSION="7 (Core)"
[2025-10-12 09:43:30] ID="centos"
[2025-10-12 09:43:30] ID_LIKE="rhel fedora"
[2025-10-12 09:43:30] VERSION_ID="7"
[2025-10-12 09:43:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:43:30] ANSI_COLOR="0;31"
[2025-10-12 09:43:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:43:30] HOME_URL="https://www.centos.org/"
[2025-10-12 09:43:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:43:30] 
[2025-10-12 09:43:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:43:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:43:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:43:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:43:30] 
[2025-10-12 09:43:30] 2025-10-12 07:42:58,520 | INFO     | ***************************************
[2025-10-12 09:43:30] 2025-10-12 07:42:59,023 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 09:43:30] 2025-10-12 07:42:59,036 | INFO     | sufficient remaining disk space (373634891776 B)
[2025-10-12 09:43:30] 2025-10-12 07:42:59,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:43:30] 2025-10-12 07:42:59,037 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:43:30] 2025-10-12 07:42:59,037 | INFO     | update_server=False
[2025-10-12 09:43:30] 2025-10-12 07:42:59,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:43:30] 2025-10-12 07:42:59,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:43:30] 2025-10-12 07:42:59,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:43:30] 2025-10-12 07:42:59,107 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 09:43:30] 2025-10-12 07:42:59,107 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 09:43:30] 2025-10-12 07:42:59,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:43:30] 2025-10-12 07:42:59,107 | INFO     | will abort loop
[2025-10-12 09:43:30] 2025-10-12 07:42:59,480 | INFO     | all data control threads have been joined
[2025-10-12 09:43:30] 2025-10-12 07:42:59,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:43:30] 2025-10-12 07:42:59,561 | INFO     | all payload control threads have been joined
[2025-10-12 09:43:30] 2025-10-12 07:42:59,763 | INFO     | all job control threads have been joined
[2025-10-12 09:43:30] 2025-10-12 07:43:00,042 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,043 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,056 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,113 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,404 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,486 | INFO     | [data] control thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,567 | INFO     | [payload] control thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,592 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,714 | INFO     | [job] validate thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,758 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,768 | INFO     | [job] control thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:00,820 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:01,038 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:01,299 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:03,539 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:09,874 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:43:30] 2025-10-12 07:43:10,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:43:30] 2025-10-12 07:43:14,965 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:43:30] 2025-10-12 07:43:16,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140358699181888)>', '<ExcThread(monitor, started 140357828331264)>']
[2025-10-12 09:43:30] 2025-10-12 07:43:21,398 | INFO     | all workflow threads have been joined
[2025-10-12 09:43:30] 2025-10-12 07:43:21,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:43:30] 2025-10-12 07:43:21,398 | INFO     | traces error code: 0
[2025-10-12 09:43:30] 2025-10-12 07:43:21,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:43:30] 2025-10-12 07:43:30,068 | INFO     | PID=2699455 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:43:30] 2025-10-12 07:43:30,068 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:43:30] 2025-10-12 07:43:30,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:43:30] 2025-10-12 07:43:30,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:43:30] 2025-10-12 07:43:30,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:43:30] 2025-10-12 07:43:30,068 | INFO     | [monitor] control thread has ended
[2025-10-12 09:43:30] 2025-10-12 07:43:30,119 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:43:30] 2025-10-12 07:43:30,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:43:30] 2025-10-12 07:43:30,124 [wrapper] pilotpid: 2699455
[2025-10-12 09:43:30] 2025-10-12 07:43:30,126 [wrapper] Pilot exit status: 0
[2025-10-12 09:43:30] 2025-10-12 07:43:30,134 [wrapper] pandaids: 6838632416
[2025-10-12 09:43:30] 2025-10-12 07:43:30,151 [wrapper] cleanup supervisor_pilot 2718049 2699456
[2025-10-12 09:43:30] 2025-10-12 07:43:30,154 [wrapper] Test setup, not cleaning
[2025-10-12 09:43:30] 2025-10-12 07:43:30,156 [wrapper] apfmon messages muted
[2025-10-12 09:43:30] 2025-10-12 07:43:30,159 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:43:30] 2025-10-12 07:43:30,161 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:43:30]  *** Error codes and diagnostics ***
[2025-10-12 09:43:30]     "exeErrorCode": 0,
[2025-10-12 09:43:30]     "exeErrorDiag": "",
[2025-10-12 09:43:30]     "pilotErrorCode": 0,
[2025-10-12 09:43:30]     "pilotErrorDiag": "",
[2025-10-12 09:43:30]  *** Listing of results directory ***
[2025-10-12 09:43:30] total 412952
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc    557409 Oct 11 18:20 pilot3.tar.gz
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:24 queuedata.json
[2025-10-12 09:43:30] -rwx------ 1 boinc boinc     36292 Oct 11 18:25 runpilot2-wrapper.sh
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc       100 Oct 12 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:43:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 08:17 run_atlas
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc       105 Oct 12 08:17 job.xml
[2025-10-12 09:43:30] -rw-r--r-- 2 boinc boinc 220950626 Oct 12 08:17 EVNT.46676267._002447.pool.root.1
[2025-10-12 09:43:30] -rw-r--r-- 2 boinc boinc    569678 Oct 12 08:17 input.tar.gz
[2025-10-12 09:43:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:17 start_atlas.sh
[2025-10-12 09:43:30] drwxrwx--x 2 boinc boinc      4096 Oct 12 08:17 shared
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc         0 Oct 12 08:17 boinc_setup_complete
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc      6448 Oct 12 08:17 init_data.xml
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc         0 Oct 12 08:17 boinc_lockfile
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc      2550 Oct 12 08:17 pandaJob.out
[2025-10-12 09:43:30] -rw------- 1 boinc boinc    975528 Oct 12 08:17 agis_schedconf.cvmfs.json
[2025-10-12 09:43:30] -rw------- 1 boinc boinc   1560580 Oct 12 08:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:43:30] drwx------ 5 boinc boinc      4096 Oct 12 08:17 pilot3
[2025-10-12 09:43:30] -rw------- 1 boinc boinc        95 Oct 12 09:42 pilot_heartbeat.json
[2025-10-12 09:43:30] -rw------- 1 boinc boinc 196025930 Oct 12 09:42 HITS.46676269._060926.pool.root.1
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc       529 Oct 12 09:42 boinc_task_state.xml
[2025-10-12 09:43:30] -rw------- 1 boinc boinc      1030 Oct 12 09:42 memory_monitor_summary.json
[2025-10-12 09:43:30] -rw------- 1 boinc boinc    244394 Oct 12 09:42 log.46676269._060926.job.log.tgz.1
[2025-10-12 09:43:30] -rw------- 1 boinc boinc      7761 Oct 12 09:42 heartbeat.json
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc      8192 Oct 12 09:43 boinc_mmap_file
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc        27 Oct 12 09:43 wrapper_checkpoint.txt
[2025-10-12 09:43:30] -rw------- 1 boinc boinc       747 Oct 12 09:43 pilotlog.txt
[2025-10-12 09:43:30] -rw------- 1 boinc boinc    754131 Oct 12 09:43 log.46676269._060926.job.log.1
[2025-10-12 09:43:30] -rw------- 1 boinc boinc       357 Oct 12 09:43 output.list
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc       620 Oct 12 09:43 runtime_log
[2025-10-12 09:43:30] -rw------- 1 boinc boinc   1013760 Oct 12 09:43 result.tar.gz
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc      8792 Oct 12 09:43 runtime_log.err
[2025-10-12 09:43:30] -rw------- 1 boinc boinc       661 Oct 12 09:43 DouLDmNarR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFwgNDm009Uwm.diag
[2025-10-12 09:43:30] -rw-r--r-- 1 boinc boinc      9852 Oct 12 09:43 stderr.txt
[2025-10-12 09:43:30] HITS file was successfully produced:
[2025-10-12 09:43:30] -rw------- 1 boinc boinc 196025930 Oct 12 09:42 shared/HITS.pool.root.1
[2025-10-12 09:43:30]  *** Contents of shared directory: ***
[2025-10-12 09:43:30] total 408784
[2025-10-12 09:43:30] -rw-r--r-- 2 boinc boinc 220950626 Oct 12 08:17 ATLAS.root_0
[2025-10-12 09:43:30] -rw-r--r-- 2 boinc boinc    569678 Oct 12 08:17 input.tar.gz
[2025-10-12 09:43:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:17 start_atlas.sh
[2025-10-12 09:43:30] -rw------- 1 boinc boinc 196025930 Oct 12 09:42 HITS.pool.root.1
[2025-10-12 09:43:30] -rw------- 1 boinc boinc   1013760 Oct 12 09:43 result.tar.gz
09:43:32 (2695742): run_atlas exited; CPU time 14808.231411
09:43:32 (2695742): called boinc_finish(0)

</stderr_txt>
]]>

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