Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:18 (5056): wrapper (7.7.26015): starting
17:20:18 (5056): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 17:20:18] Arguments: --nthreads 4
[2025-10-11 17:20:18] Threads: 4
[2025-10-11 17:20:18] Checking for CVMFS
[2025-10-11 17:20:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:20:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:20:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:20:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:20:18] 2.11.2.0 2433 37878 64580 151597 1 56 11961575 20275201 1 130560 0 17618019 99.988 1221298 54471 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:20:18] CVMFS is ok
[2025-10-11 17:20:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:20:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:20:18] Further information can be found at the LHC@home message board.
[2025-10-11 17:20:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:20:18] Checking for apptainer binary...
[2025-10-11 17:20:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:20:18] Running /usr/bin/apptainer --version
[2025-10-11 17:20:18] apptainer version 1.3.2-1.el7
[2025-10-11 17:20:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:20:19] c-205-33.aglt2.org
[2025-10-11 17:20:19] apptainer works
[2025-10-11 17:20:19] Set ATHENA_PROC_NUMBER=4
[2025-10-11 17:20:19] Set ATHENA_CORE_NUMBER=4
[2025-10-11 17:20:19] Starting ATLAS job with PandaID=6838632918
[2025-10-11 17:20:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:56:41]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:56:41]  protocol_id=None
[2025-10-11 18:56:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 18:56:41]  replicas=None
[2025-10-11 18:56:41]  scope=mc23_13p6TeV
[2025-10-11 18:56:41]  status=None
[2025-10-11 18:56:41]  status_code=0
[2025-10-11 18:56:41]  storage_token=
[2025-10-11 18:56:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838632918/log.46676269._061127.job.log.tgz.1
[2025-10-11 18:56:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/4a/log.46676269._061127.job.log.tgz.1
[2025-10-11 18:56:41]  workdir=None
[2025-10-11 18:56:41] ]
[2025-10-11 18:56:41] 2025-10-11 22:55:41,366 | INFO     | transferring file log.46676269._061127.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838632918/log.46676269._061127.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 18:56:41] 2025-10-11 22:55:41,366 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838632918/log.46676269._061127.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._061127.job
[2025-10-11 18:56:41] 2025-10-11 22:55:41,377 | INFO     | adding to output.list: log.46676269._061127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/4a/log.46676269._061127.job.log.tg
[2025-10-11 18:56:41] 2025-10-11 22:55:41,378 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 18:56:41] 2025-10-11 22:55:41,378 | INFO     | summary of transferred files:
[2025-10-11 18:56:41] 2025-10-11 22:55:41,378 | INFO     |  -- lfn=log.46676269._061127.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 18:56:41] 2025-10-11 22:55:41,378 | INFO     | stage-out finished correctly
[2025-10-11 18:56:41] 2025-10-11 22:55:41,414 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 18:56:41] 2025-10-11 22:55:42,029 | INFO     | time since job start (5715s) is within the limit (172800.0s)
[2025-10-11 18:56:41] 2025-10-11 22:55:42,069 | WARNING  | process 15054 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 18:56:41] 2025-10-11 22:55:42,070 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838632918/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:56:41] 2025-10-11 22:55:42,099 | INFO     | number of running child processes to parent process 15054: 1
[2025-10-11 18:56:41] 2025-10-11 22:55:42,099 | INFO     | maximum number of monitored processes: 6
[2025-10-11 18:56:41] 2025-10-11 22:55:43,378 | INFO     | job 6838632918 has state=finished
[2025-10-11 18:56:41] 2025-10-11 22:55:43,378 | INFO     | preparing for final server update for job 6838632918 in state='finished'
[2025-10-11 18:56:41] 2025-10-11 22:55:43,379 | INFO     | this job has now completed (state=finished)
[2025-10-11 18:56:41] 2025-10-11 22:55:43,379 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 18:56:41] 2025-10-11 22:55:43,379 | INFO     | log transfer has been attempted: DONE
[2025-10-11 18:56:41] 2025-10-11 22:55:43,380 | INFO     | job 6838632918 has finished - writing final server update
[2025-10-11 18:56:41] 2025-10-11 22:55:43,380 | INFO     | total number of processed events: 400 (read)
[2025-10-11 18:56:41] 2025-10-11 22:55:43,381 | INFO     | executing command: lscpu
[2025-10-11 18:56:41] 2025-10-11 22:55:43,411 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 18:56:41] 2025-10-11 22:55:44,035 | INFO     | time since job start (5717s) is within the limit (172800.0s)
[2025-10-11 18:56:41] 2025-10-11 22:55:44,601 | INFO     | monitor loop #431: job 0:6838632918 is in state 'finished'
[2025-10-11 18:56:41] 2025-10-11 22:55:44,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:56:41] 2025-10-11 22:55:45,818 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 18:56:41] 2025-10-11 22:55:45,820 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 1599.92
[2025-10-11 18:56:41] 2025-10-11 22:55:45,821 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838632918/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:56:41] 2025-10-11 22:55:45,822 | INFO     | extracted standard info from prmon json
[2025-10-11 18:56:41] 2025-10-11 22:55:45,822 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:56:41] 2025-10-11 22:55:45,822 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:56:41] 2025-10-11 22:55:45,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:56:41] 2025-10-11 22:55:45,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:56:41] 2025-10-11 22:55:45,825 | INFO     | fitting pss+swap vs Time
[2025-10-11 18:56:41] 2025-10-11 22:55:45,825 | INFO     | sum of square deviations: 204163828.0
[2025-10-11 18:56:41] 2025-10-11 22:55:45,825 | INFO     | sum of deviations: -16216369320.0
[2025-10-11 18:56:41] 2025-10-11 22:55:45,825 | INFO     | mean x: 1760220575.0
[2025-10-11 18:56:41] 2025-10-11 22:55:45,825 | INFO     | mean y: 2499329.3448275863
[2025-10-11 18:56:41] 2025-10-11 22:55:45,825 | INFO     | -- intersect: 139813685318.9745
[2025-10-11 18:56:41] 2025-10-11 22:55:45,825 | INFO     | intersect: 139813685318.9745
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | chi2: 0.08415124825875664
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | -- intersect: 139813685318.9745
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | current memory leak: -79.43 B/s (using 87 data points, chi2=0.08)
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | could have reported an average CPU frequency of 2970 MHz (7 samples)
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | ..............................
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | . Timing measurements:
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | . get job = 0 s
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | . initial setup = 2 s
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | . payload setup = 3 s
[2025-10-11 18:56:41] 2025-10-11 22:55:45,826 | INFO     | . stage-in = 0 s
[2025-10-11 18:56:41] 2025-10-11 22:55:45,827 | INFO     | . payload execution = 5693 s
[2025-10-11 18:56:41] 2025-10-11 22:55:45,827 | INFO     | . stage-out = 0 s
[2025-10-11 18:56:41] 2025-10-11 22:55:45,827 | INFO     | . log creation = 0 s
[2025-10-11 18:56:41] 2025-10-11 22:55:45,827 | INFO     | ..............................
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | 
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | job summary report
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | --------------------------------------------------
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | PanDA job id: 6838632918
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | task id: 46676269
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | errors: (none)
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | pilot state: finished 
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | transexitcode: 0
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | exeerrorcode: 0
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | exeerrordiag: 
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | exitcode: 0
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | exitmsg: OK
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | cpuconsumptiontime: 22169 s
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | nevents: 400
[2025-10-11 18:56:41] 2025-10-11 22:55:45,867 | INFO     | neventsw: 0
[2025-10-11 18:56:41] 2025-10-11 22:55:45,868 | INFO     | pid: 15054
[2025-10-11 18:56:41] 2025-10-11 22:55:45,868 | INFO     | pgrp: 15054
[2025-10-11 18:56:41] 2025-10-11 22:55:45,868 | INFO     | corecount: 4
[2025-10-11 18:56:41] 2025-10-11 22:55:45,868 | INFO     | event service: False
[2025-10-11 18:56:41] 2025-10-11 22:55:45,868 | INFO     | sizes: {0: 2348857, 2: 2349119, 10: 2349147, 5700: 2375927, 5701: 2384981, 5705: 2385119}
[2025-10-11 18:56:41] 2025-10-11 22:55:45,868 | INFO     | --------------------------------------------------
[2025-10-11 18:56:41] 2025-10-11 22:55:45,868 | INFO     | 
[2025-10-11 18:56:41] 2025-10-11 22:55:45,868 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 18:56:41] 2025-10-11 22:55:46,010 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,013 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:56:41] 2025-10-11 22:55:46,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:56:41] 2025-10-11 22:55:46,014 | INFO     | job 6838632918 has completed (purged errors)
[2025-10-11 18:56:41] 2025-10-11 22:55:46,014 | INFO     | overall cleanup function is called
[2025-10-11 18:56:41] 2025-10-11 22:55:47,017 | INFO     | --- collectZombieJob: --- 10, [15054]
[2025-10-11 18:56:41] 2025-10-11 22:55:47,017 | INFO     | zombie collector waiting for pid 15054
[2025-10-11 18:56:41] 2025-10-11 22:55:47,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:56:41] 2025-10-11 22:55:47,018 | INFO     | collected zombie processes
[2025-10-11 18:56:41] 2025-10-11 22:55:47,018 | INFO     | will attempt to kill all subprocesses of pid=15054
[2025-10-11 18:56:41] 2025-10-11 22:55:47,051 | INFO     | process IDs to be killed: [15054] (in reverse order)
[2025-10-11 18:56:41] 2025-10-11 22:55:47,073 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:56:41] 2025-10-11 22:55:47,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:56:41] 2025-10-11 22:55:47,074 | INFO     | did not find any defunct processes belonging to 15054
[2025-10-11 18:56:41] 2025-10-11 22:55:47,075 | INFO     | did not find any defunct processes belonging to 15054
[2025-10-11 18:56:41] 2025-10-11 22:55:47,075 | INFO     | ready for new job
[2025-10-11 18:56:41] 2025-10-11 22:55:47,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:56:41] 2025-10-11 22:55:47,076 | INFO     | ***************************************
[2025-10-11 18:56:41] 2025-10-11 22:55:47,076 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:56:41] 2025-10-11 22:55:47,076 | INFO     | ***************************************
[2025-10-11 18:56:41] 2025-10-11 22:55:47,076 | INFO     | 
[2025-10-11 18:56:41] 2025-10-11 22:55:47,077 | INFO     | architecture information:
[2025-10-11 18:56:41] 2025-10-11 22:55:47,077 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:56:41] 2025-10-11 22:55:47,085 | INFO     | cat /etc/os-release:
[2025-10-11 18:56:41] NAME="CentOS Linux"
[2025-10-11 18:56:41] VERSION="7 (Core)"
[2025-10-11 18:56:41] ID="centos"
[2025-10-11 18:56:41] ID_LIKE="rhel fedora"
[2025-10-11 18:56:41] VERSION_ID="7"
[2025-10-11 18:56:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:56:41] ANSI_COLOR="0;31"
[2025-10-11 18:56:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:56:41] HOME_URL="https://www.centos.org/"
[2025-10-11 18:56:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:56:41] 
[2025-10-11 18:56:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:56:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:56:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:56:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:56:41] 
[2025-10-11 18:56:41] 2025-10-11 22:55:47,085 | INFO     | ***************************************
[2025-10-11 18:56:41] 2025-10-11 22:55:47,588 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 18:56:41] 2025-10-11 22:55:47,613 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-10-11 18:56:41] 2025-10-11 22:55:47,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:56:41] 2025-10-11 22:55:47,614 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:56:41] 2025-10-11 22:55:47,614 | INFO     | update_server=False
[2025-10-11 18:56:41] 2025-10-11 22:55:47,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:56:41] 2025-10-11 22:55:47,615 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:56:41] 2025-10-11 22:55:47,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:56:41] 2025-10-11 22:55:47,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:56:41] 2025-10-11 22:55:47,650 | INFO     | all job control threads have been joined
[2025-10-11 18:56:41] 2025-10-11 22:55:48,100 | INFO     | all data control threads have been joined
[2025-10-11 18:56:41] 2025-10-11 22:55:48,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:56:41] 2025-10-11 22:55:48,110 | INFO     | aborting loop
[2025-10-11 18:56:41] 2025-10-11 22:55:48,617 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:48,621 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:48,655 | INFO     | [job] control thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:48,900 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:48,901 | INFO     | [job] validate thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:48,926 | INFO     | all payload control threads have been joined
[2025-10-11 18:56:41] 2025-10-11 22:55:49,039 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:49,106 | INFO     | [data] control thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:49,115 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:49,407 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:49,424 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:49,623 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:49,674 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:49,928 | INFO     | [payload] control thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:49,961 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:51,623 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:55:58,405 | INFO     | job.realtimelogging is not enabled
[2025-10-11 18:56:41] 2025-10-11 22:55:59,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:56:41] 2025-10-11 22:56:17,161 | INFO     | PID=8714 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 18:56:41] 2025-10-11 22:56:17,161 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:56:41] 2025-10-11 22:56:17,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:56:41] 2025-10-11 22:56:17,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:56:41] 2025-10-11 22:56:36,347 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:56:41] 2025-10-11 22:56:36,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284771067712)>', '<ExcThread(monitor, started 140283882755840)>']
[2025-10-11 18:56:41] 2025-10-11 22:56:37,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:56:41] 2025-10-11 22:56:37,257 | INFO     | [monitor] control thread has ended
[2025-10-11 18:56:41] 2025-10-11 22:56:41,467 | INFO     | all workflow threads have been joined
[2025-10-11 18:56:41] 2025-10-11 22:56:41,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:56:41] 2025-10-11 22:56:41,501 | INFO     | traces error code: 0
[2025-10-11 18:56:41] 2025-10-11 22:56:41,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:56:41] 2025-10-11 22:56:41,564 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:56:41] 2025-10-11 22:56:41,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:56:41] 2025-10-11 22:56:41,568 [wrapper] pilotpid: 8714
[2025-10-11 18:56:41] 2025-10-11 22:56:41,570 [wrapper] Pilot exit status: 0
[2025-10-11 18:56:41] 2025-10-11 22:56:41,576 [wrapper] pandaids: 6838632918
[2025-10-11 18:56:41] 2025-10-11 22:56:41,591 [wrapper] cleanup supervisor_pilot 13734 8715
[2025-10-11 18:56:41] 2025-10-11 22:56:41,593 [wrapper] Test setup, not cleaning
[2025-10-11 18:56:41] 2025-10-11 22:56:41,595 [wrapper] apfmon messages muted
[2025-10-11 18:56:41] 2025-10-11 22:56:41,596 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:56:41] 2025-10-11 22:56:41,598 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:56:41]  *** Error codes and diagnostics ***
[2025-10-11 18:56:41]     "exeErrorCode": 0,
[2025-10-11 18:56:41]     "exeErrorDiag": "",
[2025-10-11 18:56:41]     "pilotErrorCode": 0,
[2025-10-11 18:56:41]     "pilotErrorDiag": "",
[2025-10-11 18:56:41]  *** Listing of results directory ***
[2025-10-11 18:56:41] total 409860
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 12:20 pilot3.tar.gz
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 12:33 queuedata.json
[2025-10-11 18:56:41] -rwx------ 1 boincer umatlas     36292 Oct 11 12:34 runpilot2-wrapper.sh
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas       100 Oct 11 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:56:41] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 17:20 run_atlas
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas       105 Oct 11 17:20 job.xml
[2025-10-11 18:56:41] -rw-r--r-- 2 boincer umatlas 219736263 Oct 11 17:20 EVNT.46676267._002455.pool.root.1
[2025-10-11 18:56:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:20 start_atlas.sh
[2025-10-11 18:56:41] drwxrwx--x 2 boincer umatlas      4096 Oct 11 17:20 shared
[2025-10-11 18:56:41] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 17:20 input.tar.gz
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas         0 Oct 11 17:20 boinc_lockfile
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 17:20 pandaJob.out
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas    975528 Oct 11 17:20 agis_schedconf.cvmfs.json
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas   1560580 Oct 11 17:20 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:56:41] drwx------ 5 boincer umatlas      4096 Oct 11 17:20 pilot3
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas      6239 Oct 11 18:45 init_data.xml
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas 193863530 Oct 11 18:55 HITS.46676269._061127.pool.root.1
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas       529 Oct 11 18:55 boinc_task_state.xml
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas      1043 Oct 11 18:55 memory_monitor_summary.json
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas    272613 Oct 11 18:55 log.46676269._061127.job.log.tgz.1
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas      7830 Oct 11 18:55 heartbeat.json
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas        95 Oct 11 18:56 pilot_heartbeat.json
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas        27 Oct 11 18:56 wrapper_checkpoint.txt
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 18:56 boinc_mmap_file
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas      4817 Oct 11 18:56 pilotlog.txt
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas    823834 Oct 11 18:56 log.46676269._061127.job.log.1
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas       357 Oct 11 18:56 output.list
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas       620 Oct 11 18:56 runtime_log
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas   1116160 Oct 11 18:56 result.tar.gz
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 18:56 runtime_log.err
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas       656 Oct 11 18:56 JZyLDmvirR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIFSMDmCx2uYn.diag
[2025-10-11 18:56:41] -rw-r--r-- 1 boincer umatlas     21728 Oct 11 18:56 stderr.txt
[2025-10-11 18:56:41] HITS file was successfully produced:
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas 193863530 Oct 11 18:55 shared/HITS.pool.root.1
[2025-10-11 18:56:41]  *** Contents of shared directory: ***
[2025-10-11 18:56:41] total 405580
[2025-10-11 18:56:41] -rw-r--r-- 2 boincer umatlas 219736263 Oct 11 17:20 ATLAS.root_0
[2025-10-11 18:56:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:20 start_atlas.sh
[2025-10-11 18:56:41] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 17:20 input.tar.gz
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas 193863530 Oct 11 18:55 HITS.pool.root.1
[2025-10-11 18:56:41] -rw------- 1 boincer umatlas   1116160 Oct 11 18:56 result.tar.gz
18:56:43 (5056): run_atlas exited; CPU time 22187.547157
18:56:43 (5056): called boinc_finish(0)

</stderr_txt>
]]>

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