Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
22:37:27 (1152042): wrapper (7.7.26015): starting
22:37:27 (1152042): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 22:37:27] Arguments: --nthreads 12
[2025-10-11 22:37:27] Threads: 12
[2025-10-11 22:37:27] Checking for CVMFS
[2025-10-11 22:37:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:37:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:37:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:37:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:37:27] 2.11.0.0 3299214 2231 83188 151599 2 188 5239627 6144001 13948 130560 0 43893117 100.000 80711 186 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 22:37:27] CVMFS is ok
[2025-10-11 22:37:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:37:27] Checking for apptainer binary...
[2025-10-11 22:37:27] apptainer is not installed, using version from CVMFS
[2025-10-11 22:37:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:37:28] radiat0r
[2025-10-11 22:37:28] apptainer works
[2025-10-11 22:37:28] Set ATHENA_PROC_NUMBER=12
[2025-10-11 22:37:28] Set ATHENA_CORE_NUMBER=12
[2025-10-11 22:37:28] Starting ATLAS job with PandaID=6837630377
[2025-10-11 22:37:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:30:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:30:52]  storage_token=
[2025-10-11 23:30:52]  surl=/var/lib/boinc/slots/12/PanDA_Pilot-6837630377/log.46676269._039017.job.log.tgz.1
[2025-10-11 23:30:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/28/log.46676269._039017.job.log.tgz.1
[2025-10-11 23:30:52]  workdir=None
[2025-10-11 23:30:52] ]
[2025-10-11 23:30:52] 2025-10-11 23:30:08,214 | INFO     | time since job start (3146s) is within the limit (172800.0s)
[2025-10-11 23:30:52] 2025-10-11 23:30:08,270 | INFO     | transferring file log.46676269._039017.job.log.tgz.1 from /var/lib/boinc/slots/12/PanDA_Pilot-6837630377/log.46676269._039017.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 23:30:52] 2025-10-11 23:30:08,271 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/12/PanDA_Pilot-6837630377/log.46676269._039017.job.log.tgz.1 /var/lib/boinc/slots/12/log.46676269._039017.j
[2025-10-11 23:30:52] 2025-10-11 23:30:08,299 | INFO     | adding to output.list: log.46676269._039017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/28/log.46676269._039017.job.log.tg
[2025-10-11 23:30:52] 2025-10-11 23:30:08,300 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 23:30:52] 2025-10-11 23:30:08,300 | INFO     | summary of transferred files:
[2025-10-11 23:30:52] 2025-10-11 23:30:08,301 | INFO     |  -- lfn=log.46676269._039017.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 23:30:52] 2025-10-11 23:30:08,301 | INFO     | stage-out finished correctly
[2025-10-11 23:30:52] 2025-10-11 23:30:08,401 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 23:30:52] 2025-10-11 23:30:08,531 | WARNING  | process 1179866 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 23:30:52] 2025-10-11 23:30:08,531 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6837630377/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:30:52] 2025-10-11 23:30:09,243 | INFO     | job 6837630377 has state=finished
[2025-10-11 23:30:52] 2025-10-11 23:30:09,243 | INFO     | preparing for final server update for job 6837630377 in state='finished'
[2025-10-11 23:30:52] 2025-10-11 23:30:09,244 | INFO     | this job has now completed (state=finished)
[2025-10-11 23:30:52] 2025-10-11 23:30:09,244 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 23:30:52] 2025-10-11 23:30:09,245 | INFO     | log transfer has been attempted: DONE
[2025-10-11 23:30:52] 2025-10-11 23:30:09,245 | INFO     | job 6837630377 has finished - writing final server update
[2025-10-11 23:30:52] 2025-10-11 23:30:09,245 | INFO     | total number of processed events: 400 (read)
[2025-10-11 23:30:52] 2025-10-11 23:30:09,247 | INFO     | executing command: lscpu
[2025-10-11 23:30:52] 2025-10-11 23:30:09,406 | INFO     | number of running child processes to parent process 1179866: 1
[2025-10-11 23:30:52] 2025-10-11 23:30:09,406 | INFO     | maximum number of monitored processes: 6
[2025-10-11 23:30:52] 2025-10-11 23:30:09,443 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 23:30:52] 2025-10-11 23:30:10,259 | INFO     | time since job start (3148s) is within the limit (172800.0s)
[2025-10-11 23:30:52] 2025-10-11 23:30:11,909 | INFO     | monitor loop #219: job 0:6837630377 is in state 'finished'
[2025-10-11 23:30:52] 2025-10-11 23:30:11,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:30:52] 2025-10-11 23:30:12,263 | INFO     | time since job start (3150s) is within the limit (172800.0s)
[2025-10-11 23:30:52] 2025-10-11 23:30:14,268 | INFO     | time since job start (3152s) is within the limit (172800.0s)
[2025-10-11 23:30:52] 2025-10-11 23:30:14,410 | INFO     | monitor loop #220: job 0:6837630377 is in state 'finished'
[2025-10-11 23:30:52] 2025-10-11 23:30:14,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:30:52] 2025-10-11 23:30:15,978 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 23:30:52] 2025-10-11 23:30:16,101 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2372.0179375000007
[2025-10-11 23:30:52] 2025-10-11 23:30:16,179 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6837630377/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:30:52] 2025-10-11 23:30:16,180 | INFO     | extracted standard info from prmon json
[2025-10-11 23:30:52] 2025-10-11 23:30:16,180 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:30:52] 2025-10-11 23:30:16,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:30:52] 2025-10-11 23:30:16,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:30:52] 2025-10-11 23:30:16,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:30:52] 2025-10-11 23:30:16,183 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:30:52] 2025-10-11 23:30:16,183 | INFO     | sum of square deviations: 26400495.0
[2025-10-11 23:30:52] 2025-10-11 23:30:16,183 | INFO     | sum of deviations: 167917780.50000003
[2025-10-11 23:30:52] 2025-10-11 23:30:16,184 | INFO     | mean x: 1760223914.5
[2025-10-11 23:30:52] 2025-10-11 23:30:16,184 | INFO     | mean y: 2680881.522727273
[2025-10-11 23:30:52] 2025-10-11 23:30:16,184 | INFO     | -- intersect: -11193052111.584476
[2025-10-11 23:30:52] 2025-10-11 23:30:16,184 | INFO     | intersect: -11193052111.584476
[2025-10-11 23:30:52] 2025-10-11 23:30:16,184 | INFO     | chi2: 0.0022575019841230724
[2025-10-11 23:30:52] 2025-10-11 23:30:16,185 | INFO     | -- intersect: -11193052111.584476
[2025-10-11 23:30:52] 2025-10-11 23:30:16,185 | INFO     | current memory leak: 6.36 B/s (using 44 data points, chi2=0.00)
[2025-10-11 23:30:52] 2025-10-11 23:30:16,185 | INFO     | could have reported an average CPU frequency of 2401 MHz (5 samples)
[2025-10-11 23:30:52] 2025-10-11 23:30:16,185 | INFO     | ..............................
[2025-10-11 23:30:52] 2025-10-11 23:30:16,186 | INFO     | . Timing measurements:
[2025-10-11 23:30:52] 2025-10-11 23:30:16,186 | INFO     | . get job = 0 s
[2025-10-11 23:30:52] 2025-10-11 23:30:16,186 | INFO     | . initial setup = 1 s
[2025-10-11 23:30:52] 2025-10-11 23:30:16,186 | INFO     | . payload setup = 8 s
[2025-10-11 23:30:52] 2025-10-11 23:30:16,186 | INFO     | . stage-in = 0 s
[2025-10-11 23:30:52] 2025-10-11 23:30:16,186 | INFO     | . payload execution = 3112 s
[2025-10-11 23:30:52] 2025-10-11 23:30:16,187 | INFO     | . stage-out = 1 s
[2025-10-11 23:30:52] 2025-10-11 23:30:16,187 | INFO     | . log creation = 0 s
[2025-10-11 23:30:52] 2025-10-11 23:30:16,187 | INFO     | ..............................
[2025-10-11 23:30:52] 2025-10-11 23:30:16,522 | INFO     | PID=1160166 has CPU usage=23.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 23:30:52] 2025-10-11 23:30:16,523 | INFO     | .. there are 17 such processes running
[2025-10-11 23:30:52] 2025-10-11 23:30:16,644 | INFO     | 
[2025-10-11 23:30:52] 2025-10-11 23:30:16,644 | INFO     | job summary report
[2025-10-11 23:30:52] 2025-10-11 23:30:16,644 | INFO     | --------------------------------------------------
[2025-10-11 23:30:52] 2025-10-11 23:30:16,644 | INFO     | PanDA job id: 6837630377
[2025-10-11 23:30:52] 2025-10-11 23:30:16,644 | INFO     | task id: 46676269
[2025-10-11 23:30:52] 2025-10-11 23:30:16,644 | INFO     | errors: (none)
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | pilot state: finished 
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | transexitcode: 0
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | exeerrorcode: 0
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | exeerrordiag: 
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | exitcode: 0
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | exitmsg: OK
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | cpuconsumptiontime: 33509 s
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | nevents: 400
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | neventsw: 0
[2025-10-11 23:30:52] 2025-10-11 23:30:16,645 | INFO     | pid: 1179866
[2025-10-11 23:30:52] 2025-10-11 23:30:16,646 | INFO     | pgrp: 1179866
[2025-10-11 23:30:52] 2025-10-11 23:30:16,646 | INFO     | corecount: 12
[2025-10-11 23:30:52] 2025-10-11 23:30:16,646 | INFO     | event service: False
[2025-10-11 23:30:52] 2025-10-11 23:30:16,646 | INFO     | sizes: {0: 2348631, 1: 2348886, 8: 2349148, 12: 2349176, 3125: 2374719, 3127: 2383903, 3135: 2384073}
[2025-10-11 23:30:52] 2025-10-11 23:30:16,646 | INFO     | --------------------------------------------------
[2025-10-11 23:30:52] 2025-10-11 23:30:16,646 | INFO     | 
[2025-10-11 23:30:52] 2025-10-11 23:30:16,646 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-11 23:30:52] 2025-10-11 23:30:16,679 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,680 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,680 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,680 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,680 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,680 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:30:52] 2025-10-11 23:30:16,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:30:52] 2025-10-11 23:30:16,682 | INFO     | job 6837630377 has completed (purged errors)
[2025-10-11 23:30:52] 2025-10-11 23:30:16,682 | INFO     | overall cleanup function is called
[2025-10-11 23:30:52] 2025-10-11 23:30:17,690 | INFO     | --- collectZombieJob: --- 10, [1179866]
[2025-10-11 23:30:52] 2025-10-11 23:30:17,691 | INFO     | zombie collector waiting for pid 1179866
[2025-10-11 23:30:52] 2025-10-11 23:30:17,691 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:30:52] 2025-10-11 23:30:17,691 | INFO     | collected zombie processes
[2025-10-11 23:30:52] 2025-10-11 23:30:17,691 | INFO     | will attempt to kill all subprocesses of pid=1179866
[2025-10-11 23:30:52] 2025-10-11 23:30:18,555 | INFO     | process IDs to be killed: [1179866] (in reverse order)
[2025-10-11 23:30:52] 2025-10-11 23:30:18,845 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:30:52] 2025-10-11 23:30:18,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:30:52] 2025-10-11 23:30:18,874 | INFO     | did not find any defunct processes belonging to 1179866
[2025-10-11 23:30:52] 2025-10-11 23:30:18,902 | INFO     | did not find any defunct processes belonging to 1179866
[2025-10-11 23:30:52] 2025-10-11 23:30:18,902 | INFO     | ready for new job
[2025-10-11 23:30:52] 2025-10-11 23:30:18,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:30:52] 2025-10-11 23:30:18,904 | INFO     | ***************************************
[2025-10-11 23:30:52] 2025-10-11 23:30:18,904 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:30:52] 2025-10-11 23:30:18,905 | INFO     | ***************************************
[2025-10-11 23:30:52] 2025-10-11 23:30:18,905 | INFO     | 
[2025-10-11 23:30:52] 2025-10-11 23:30:18,944 | INFO     | architecture information:
[2025-10-11 23:30:52] 2025-10-11 23:30:18,946 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:30:52] 2025-10-11 23:30:18,978 | INFO     | cat /etc/os-release:
[2025-10-11 23:30:52] NAME="CentOS Linux"
[2025-10-11 23:30:52] VERSION="7 (Core)"
[2025-10-11 23:30:52] ID="centos"
[2025-10-11 23:30:52] ID_LIKE="rhel fedora"
[2025-10-11 23:30:52] VERSION_ID="7"
[2025-10-11 23:30:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:30:52] ANSI_COLOR="0;31"
[2025-10-11 23:30:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:30:52] HOME_URL="https://www.centos.org/"
[2025-10-11 23:30:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:30:52] 
[2025-10-11 23:30:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:30:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:30:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:30:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:30:52] 
[2025-10-11 23:30:52] 2025-10-11 23:30:18,979 | INFO     | ***************************************
[2025-10-11 23:30:52] 2025-10-11 23:30:19,483 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-11 23:30:52] 2025-10-11 23:30:19,511 | INFO     | sufficient remaining disk space (1725789372416 B)
[2025-10-11 23:30:52] 2025-10-11 23:30:19,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:30:52] 2025-10-11 23:30:19,511 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:30:52] 2025-10-11 23:30:19,512 | INFO     | update_server=False
[2025-10-11 23:30:52] 2025-10-11 23:30:19,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:30:52] 2025-10-11 23:30:19,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:30:52] 2025-10-11 23:30:19,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:30:52] 2025-10-11 23:30:20,121 | INFO     | all data control threads have been joined
[2025-10-11 23:30:52] 2025-10-11 23:30:20,405 | INFO     | all payload control threads have been joined
[2025-10-11 23:30:52] 2025-10-11 23:30:20,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:30:52] 2025-10-11 23:30:20,427 | INFO     | aborting loop
[2025-10-11 23:30:52] 2025-10-11 23:30:20,514 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:20,685 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:20,896 | INFO     | [job] validate thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,017 | INFO     | all job control threads have been joined
[2025-10-11 23:30:52] 2025-10-11 23:30:21,035 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,072 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,122 | INFO     | [data] control thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,282 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,287 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,303 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:30:52] 2025-10-11 23:30:21,307 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,411 | INFO     | [payload] control thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,432 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,514 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:21,683 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:22,018 | INFO     | [job] control thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:22,306 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:23,515 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:30:52] 2025-10-11 23:30:47,015 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:30:52] 2025-10-11 23:30:47,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248026294080)>', '<ExcThread(monitor, started 140247308424960)>']
[2025-10-11 23:30:52] 2025-10-11 23:30:49,610 | INFO     | PID=1160166 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 23:30:52] 2025-10-11 23:30:49,611 | INFO     | .. there are 17 such processes running
[2025-10-11 23:30:52] 2025-10-11 23:30:49,612 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:30:52] 2025-10-11 23:30:49,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:30:52] 2025-10-11 23:30:49,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:30:52] 2025-10-11 23:30:49,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:30:52] 2025-10-11 23:30:49,613 | INFO     | [monitor] control thread has ended
[2025-10-11 23:30:52] 2025-10-11 23:30:52,413 | INFO     | all workflow threads have been joined
[2025-10-11 23:30:52] 2025-10-11 23:30:52,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:30:52] 2025-10-11 23:30:52,414 | INFO     | traces error code: 0
[2025-10-11 23:30:52] 2025-10-11 23:30:52,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:30:52] 2025-10-11 23:30:52,578 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:30:52] 2025-10-11 23:30:52,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:30:52] 2025-10-11 23:30:52,587 [wrapper] pilotpid: 1160166
[2025-10-11 23:30:52] 2025-10-11 23:30:52,590 [wrapper] Pilot exit status: 0
[2025-10-11 23:30:52] 2025-10-11 23:30:52,602 [wrapper] pandaids: 6837630377
[2025-10-11 23:30:52] 2025-10-11 23:30:52,783 [wrapper] cleanup supervisor_pilot 1511262 1160167
[2025-10-11 23:30:52] 2025-10-11 23:30:52,787 [wrapper] Test setup, not cleaning
[2025-10-11 23:30:52] 2025-10-11 23:30:52,791 [wrapper] apfmon messages muted
[2025-10-11 23:30:52] 2025-10-11 23:30:52,795 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:30:52] 2025-10-11 23:30:52,799 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:30:52]  *** Error codes and diagnostics ***
[2025-10-11 23:30:52]     "exeErrorCode": 0,
[2025-10-11 23:30:52]     "exeErrorDiag": "",
[2025-10-11 23:30:52]     "pilotErrorCode": 0,
[2025-10-11 23:30:52]     "pilotErrorDiag": "",
[2025-10-11 23:30:52]  *** Listing of results directory ***
[2025-10-11 23:30:52] total 416832
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc    557409 Oct 10 13:04 pilot3.tar.gz
[2025-10-11 23:30:52] -rwx------ 1 boinc boinc     36292 Oct 10 13:10 runpilot2-wrapper.sh
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc      5112 Oct 10 13:10 queuedata.json
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc       100 Oct 11 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:30:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 22:37 run_atlas
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc       105 Oct 11 22:37 job.xml
[2025-10-11 23:30:52] -rw-r--r-- 2 boinc boinc     15120 Oct 11 22:37 start_atlas.sh
[2025-10-11 23:30:52] drwxrwx--x 2 boinc boinc      4096 Oct 11 22:37 shared
[2025-10-11 23:30:52] -rw-r--r-- 2 boinc boinc    569673 Oct 11 22:37 input.tar.gz
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc      9396 Oct 11 22:37 init_data.xml
[2025-10-11 23:30:52] -rw-r--r-- 2 boinc boinc 220325885 Oct 11 22:37 EVNT.46676267._001583.pool.root.1
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc         0 Oct 11 22:37 boinc_setup_complete
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc         0 Oct 11 22:37 boinc_lockfile
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc      2550 Oct 11 22:37 pandaJob.out
[2025-10-11 23:30:52] -rw------- 1 boinc boinc    975520 Oct 11 22:37 agis_schedconf.cvmfs.json
[2025-10-11 23:30:52] -rw------- 1 boinc boinc   1560580 Oct 11 22:37 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:30:52] drwx------ 5 boinc boinc      4096 Oct 11 22:37 pilot3
[2025-10-11 23:30:52] -rw------- 1 boinc boinc 200920199 Oct 11 23:29 HITS.46676269._039017.pool.root.1
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc       530 Oct 11 23:29 boinc_task_state.xml
[2025-10-11 23:30:52] -rw------- 1 boinc boinc      1027 Oct 11 23:30 memory_monitor_summary.json
[2025-10-11 23:30:52] -rw------- 1 boinc boinc    374170 Oct 11 23:30 log.46676269._039017.job.log.tgz.1
[2025-10-11 23:30:52] -rw------- 1 boinc boinc      7744 Oct 11 23:30 heartbeat.json
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc      8192 Oct 11 23:30 boinc_mmap_file
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc        27 Oct 11 23:30 wrapper_checkpoint.txt
[2025-10-11 23:30:52] -rw------- 1 boinc boinc        95 Oct 11 23:30 pilot_heartbeat.json
[2025-10-11 23:30:52] -rw------- 1 boinc boinc      4827 Oct 11 23:30 pilotlog.txt
[2025-10-11 23:30:52] -rw------- 1 boinc boinc    466717 Oct 11 23:30 log.46676269._039017.job.log.1
[2025-10-11 23:30:52] -rw------- 1 boinc boinc       357 Oct 11 23:30 output.list
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc       620 Oct 11 23:30 runtime_log
[2025-10-11 23:30:52] -rw------- 1 boinc boinc    860160 Oct 11 23:30 result.tar.gz
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc      8672 Oct 11 23:30 runtime_log.err
[2025-10-11 23:30:52] -rw------- 1 boinc boinc       643 Oct 11 23:30 rdIKDmY4RR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmH0PMDmhJlyvm.diag
[2025-10-11 23:30:52] -rw-r--r-- 1 boinc boinc     22002 Oct 11 23:30 stderr.txt
[2025-10-11 23:30:52] HITS file was successfully produced:
[2025-10-11 23:30:52] -rw------- 1 boinc boinc 200920199 Oct 11 23:29 shared/HITS.pool.root.1
[2025-10-11 23:30:52]  *** Contents of shared directory: ***
[2025-10-11 23:30:52] total 412800
[2025-10-11 23:30:52] -rw-r--r-- 2 boinc boinc     15120 Oct 11 22:37 start_atlas.sh
[2025-10-11 23:30:52] -rw-r--r-- 2 boinc boinc    569673 Oct 11 22:37 input.tar.gz
[2025-10-11 23:30:52] -rw-r--r-- 2 boinc boinc 220325885 Oct 11 22:37 ATLAS.root_0
[2025-10-11 23:30:52] -rw------- 1 boinc boinc 200920199 Oct 11 23:29 HITS.pool.root.1
[2025-10-11 23:30:52] -rw------- 1 boinc boinc    860160 Oct 11 23:30 result.tar.gz
23:30:54 (1152042): run_atlas exited; CPU time 33716.039394
23:30:54 (1152042): called boinc_finish(0)

</stderr_txt>
]]>

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