Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:41:04 (3615138): wrapper (7.7.26015): starting
08:41:04 (3615138): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 08:41:04] Arguments: --nthreads 3
[2025-10-12 08:41:04] Threads: 3
[2025-10-12 08:41:04] Checking for CVMFS
[2025-10-12 08:41:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:41:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:41:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:41:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:41:04] 2.9.2.0 2462523 4044 65808 151611 2 57 27036726 36864000 0 130560 0 3007778 99.991 134771 772 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 08:41:04] CVMFS is ok
[2025-10-12 08:41:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:41:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:41:04] Further information can be found at the LHC@home message board.
[2025-10-12 08:41:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:41:04] Checking for apptainer binary...
[2025-10-12 08:41:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:41:04] Running /usr/bin/apptainer --version
[2025-10-12 08:41:04] apptainer version 1.4.1-1.1
[2025-10-12 08:41:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:41:04] cosA121
[2025-10-12 08:41:04] apptainer works
[2025-10-12 08:41:04] Set ATHENA_PROC_NUMBER=3
[2025-10-12 08:41:04] Set ATHENA_CORE_NUMBER=3
[2025-10-12 08:41:04] Starting ATLAS job with PandaID=6838450869
[2025-10-12 08:41:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:12:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:12:28] 2025-10-12 08:11:43,954 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 10:12:28] 2025-10-12 08:11:43,955 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2653613 B
[2025-10-12 10:12:28] 2025-10-12 08:11:43,955 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15554 B
[2025-10-12 10:12:28] 2025-10-12 08:11:43,955 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 10:12:28] 2025-10-12 08:11:43,966 | INFO     | sufficient remaining disk space (333071777792 B)
[2025-10-12 10:12:28] 2025-10-12 08:11:43,966 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 10:12:28] 2025-10-12 08:11:43,966 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6838450869: 2954708 B (within 2537553920 B limit)
[2025-10-12 10:12:28] 2025-10-12 08:11:43,966 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6838450869/HITS.46676269._057816.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 10:12:28] 2025-10-12 08:11:43,966 | INFO     | total size of present files: 0 B (workdir size: 2954708 B)
[2025-10-12 10:12:28] 2025-10-12 08:11:43,966 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6838450869/HITS.46676269._057816.pool.root.1 since it does not exist
[2025-10-12 10:12:28] 2025-10-12 08:11:44,005 | INFO     | number of running child processes to parent process 3625311: 1
[2025-10-12 10:12:28] 2025-10-12 08:11:44,005 | INFO     | maximum number of monitored processes: 6
[2025-10-12 10:12:28] 2025-10-12 08:11:44,375 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:12:28] 2025-10-12 08:11:44,492 | INFO     | time since job start (5428s) is within the limit (172800.0s)
[2025-10-12 10:12:28] 2025-10-12 08:11:44,492 | INFO     | 5429s have passed since pilot start - server update state is 'RUNNING'
[2025-10-12 10:12:28] 2025-10-12 08:11:45,827 | INFO     | job 6838450869 has state=finished
[2025-10-12 10:12:28] 2025-10-12 08:11:45,827 | INFO     | preparing for final server update for job 6838450869 in state='finished'
[2025-10-12 10:12:28] 2025-10-12 08:11:45,828 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:12:28] 2025-10-12 08:11:45,828 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:12:28] 2025-10-12 08:11:45,828 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:12:28] 2025-10-12 08:11:45,828 | INFO     | job 6838450869 has finished - writing final server update
[2025-10-12 10:12:28] 2025-10-12 08:11:45,829 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:12:28] 2025-10-12 08:11:45,830 | INFO     | executing command: lscpu
[2025-10-12 10:12:28] 2025-10-12 08:11:45,847 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:12:28] 2025-10-12 08:11:46,498 | INFO     | time since job start (5430s) is within the limit (172800.0s)
[2025-10-12 10:12:28] 2025-10-12 08:11:46,508 | INFO     | monitor loop #418: job 0:6838450869 is in state 'finished'
[2025-10-12 10:12:28] 2025-10-12 08:11:46,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:12:28] 2025-10-12 08:11:48,504 | INFO     | time since job start (5432s) is within the limit (172800.0s)
[2025-10-12 10:12:28] 2025-10-12 08:11:49,011 | INFO     | monitor loop #419: job 0:6838450869 is in state 'finished'
[2025-10-12 10:12:28] 2025-10-12 08:11:49,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:12:28] 2025-10-12 08:11:50,510 | INFO     | time since job start (5434s) is within the limit (172800.0s)
[2025-10-12 10:12:28] 2025-10-12 08:11:51,514 | INFO     | monitor loop #420: job 0:6838450869 is in state 'finished'
[2025-10-12 10:12:28] 2025-10-12 08:11:51,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:12:28] 2025-10-12 08:11:52,516 | INFO     | time since job start (5436s) is within the limit (172800.0s)
[2025-10-12 10:12:28] 2025-10-12 08:11:54,017 | INFO     | monitor loop #421: job 0:6838450869 is in state 'finished'
[2025-10-12 10:12:28] 2025-10-12 08:11:54,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:12:28] 2025-10-12 08:11:54,285 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 10:12:28] 2025-10-12 08:11:54,286 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4007.928
[2025-10-12 10:12:28] 2025-10-12 08:11:54,287 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838450869/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:12:28] 2025-10-12 08:11:54,287 | INFO     | extracted standard info from prmon json
[2025-10-12 10:12:28] 2025-10-12 08:11:54,287 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:12:28] 2025-10-12 08:11:54,287 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:12:28] 2025-10-12 08:11:54,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:12:28] 2025-10-12 08:11:54,287 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:12:28] 2025-10-12 08:11:54,288 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:12:28] 2025-10-12 08:11:54,288 | INFO     | sum of square deviations: 170944600.5
[2025-10-12 10:12:28] 2025-10-12 08:11:54,288 | INFO     | sum of deviations: -10554166686.000002
[2025-10-12 10:12:28] 2025-10-12 08:11:54,288 | INFO     | mean x: 1760254077.5
[2025-10-12 10:12:28] 2025-10-12 08:11:54,288 | INFO     | mean y: 2443604.975609756
[2025-10-12 10:12:28] 2025-10-12 08:11:54,288 | INFO     | -- intersect: 108681014845.64003
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | intersect: 108681014845.64003
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | chi2: 0.053976384211068866
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | -- intersect: 108681014845.64003
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | current memory leak: -61.74 B/s (using 82 data points, chi2=0.05)
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | could have reported an average CPU frequency of 4276 MHz (6 samples)
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | ..............................
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | . Timing measurements:
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | . get job = 0 s
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | . initial setup = 1 s
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | . payload setup = 5 s
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | . stage-in = 0 s
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | . payload execution = 5400 s
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | . stage-out = 0 s
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | . log creation = 0 s
[2025-10-12 10:12:28] 2025-10-12 08:11:54,289 | INFO     | ..............................
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | 
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | job summary report
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | --------------------------------------------------
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | PanDA job id: 6838450869
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | task id: 46676269
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | errors: (none)
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | pilot state: finished 
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | transexitcode: 0
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | exeerrorcode: 0
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | exeerrordiag: 
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | exitcode: 0
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | exitmsg: OK
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | cpuconsumptiontime: 15533 s
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | nevents: 400
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | neventsw: 0
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | pid: 3625311
[2025-10-12 10:12:28] 2025-10-12 08:11:54,321 | INFO     | pgrp: 3625311
[2025-10-12 10:12:28] 2025-10-12 08:11:54,322 | INFO     | corecount: 3
[2025-10-12 10:12:28] 2025-10-12 08:11:54,322 | INFO     | event service: False
[2025-10-12 10:12:28] 2025-10-12 08:11:54,322 | INFO     | sizes: {0: 2348860, 5: 2349122, 11: 2349178, 5409: 2375801, 5410: 2384805, 5411: 2384889, 5421: 2385211}
[2025-10-12 10:12:28] 2025-10-12 08:11:54,322 | INFO     | --------------------------------------------------
[2025-10-12 10:12:28] 2025-10-12 08:11:54,322 | INFO     | 
[2025-10-12 10:12:28] 2025-10-12 08:11:54,322 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 10:12:28] 2025-10-12 08:11:54,333 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | job 6838450869 has completed (purged errors)
[2025-10-12 10:12:28] 2025-10-12 08:11:54,334 | INFO     | overall cleanup function is called
[2025-10-12 10:12:28] 2025-10-12 08:11:55,341 | INFO     | --- collectZombieJob: --- 10, [3625311]
[2025-10-12 10:12:28] 2025-10-12 08:11:55,341 | INFO     | zombie collector waiting for pid 3625311
[2025-10-12 10:12:28] 2025-10-12 08:11:55,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:12:28] 2025-10-12 08:11:55,341 | INFO     | collected zombie processes
[2025-10-12 10:12:28] 2025-10-12 08:11:55,342 | INFO     | will attempt to kill all subprocesses of pid=3625311
[2025-10-12 10:12:28] 2025-10-12 08:11:55,386 | INFO     | process IDs to be killed: [3625311] (in reverse order)
[2025-10-12 10:12:28] 2025-10-12 08:11:55,411 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:12:28] 2025-10-12 08:11:55,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:12:28] 2025-10-12 08:11:55,413 | INFO     | did not find any defunct processes belonging to 3625311
[2025-10-12 10:12:28] 2025-10-12 08:11:55,414 | INFO     | did not find any defunct processes belonging to 3625311
[2025-10-12 10:12:28] 2025-10-12 08:11:55,414 | INFO     | ready for new job
[2025-10-12 10:12:28] 2025-10-12 08:11:55,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:12:28] 2025-10-12 08:11:55,414 | INFO     | ***************************************
[2025-10-12 10:12:28] 2025-10-12 08:11:55,414 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:12:28] 2025-10-12 08:11:55,415 | INFO     | ***************************************
[2025-10-12 10:12:28] 2025-10-12 08:11:55,415 | INFO     | 
[2025-10-12 10:12:28] 2025-10-12 08:11:55,415 | INFO     | architecture information:
[2025-10-12 10:12:28] 2025-10-12 08:11:55,415 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:12:28] 2025-10-12 08:11:55,425 | INFO     | cat /etc/os-release:
[2025-10-12 10:12:28] NAME="CentOS Linux"
[2025-10-12 10:12:28] VERSION="7 (Core)"
[2025-10-12 10:12:28] ID="centos"
[2025-10-12 10:12:28] ID_LIKE="rhel fedora"
[2025-10-12 10:12:28] VERSION_ID="7"
[2025-10-12 10:12:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:12:28] ANSI_COLOR="0;31"
[2025-10-12 10:12:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:12:28] HOME_URL="https://www.centos.org/"
[2025-10-12 10:12:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:12:28] 
[2025-10-12 10:12:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:12:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:12:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:12:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:12:28] 
[2025-10-12 10:12:28] 2025-10-12 08:11:55,425 | INFO     | ***************************************
[2025-10-12 10:12:28] 2025-10-12 08:11:55,929 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 10:12:28] 2025-10-12 08:11:55,941 | INFO     | sufficient remaining disk space (333072826368 B)
[2025-10-12 10:12:28] 2025-10-12 08:11:55,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:12:28] 2025-10-12 08:11:55,942 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:12:28] 2025-10-12 08:11:55,942 | INFO     | update_server=False
[2025-10-12 10:12:28] 2025-10-12 08:11:55,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:12:28] 2025-10-12 08:11:55,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:12:28] 2025-10-12 08:11:55,942 | INFO     | aborting loop
[2025-10-12 10:12:28] 2025-10-12 08:11:55,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:12:28] 2025-10-12 08:11:56,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:12:28] 2025-10-12 08:11:56,740 | INFO     | all job control threads have been joined
[2025-10-12 10:12:28] 2025-10-12 08:11:56,947 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:56,948 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:56,948 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:56,973 | INFO     | all data control threads have been joined
[2025-10-12 10:12:28] 2025-10-12 08:11:57,019 | INFO     | all payload control threads have been joined
[2025-10-12 10:12:28] 2025-10-12 08:11:57,061 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:57,292 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:57,735 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:57,746 | INFO     | [job] control thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:57,898 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:57,979 | INFO     | [data] control thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:58,025 | INFO     | [payload] control thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:58,074 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:58,229 | INFO     | [job] validate thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:58,384 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:58,577 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:11:59,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:12:28] 2025-10-12 08:12:03,429 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:12:06,089 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:12:28] 2025-10-12 08:12:07,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:12:28] 2025-10-12 08:12:22,303 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:12:28] 2025-10-12 08:12:23,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699862128448)>', '<ExcThread(monitor, started 140699202729728)>']
[2025-10-12 10:12:28] 2025-10-12 08:12:25,628 | INFO     | PID=3618866 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:12:28] 2025-10-12 08:12:25,628 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:12:28] 2025-10-12 08:12:25,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:12:28] 2025-10-12 08:12:25,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:12:28] 2025-10-12 08:12:25,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:12:28] 2025-10-12 08:12:25,628 | INFO     | [monitor] control thread has ended
[2025-10-12 10:12:28] 2025-10-12 08:12:28,655 | INFO     | all workflow threads have been joined
[2025-10-12 10:12:28] 2025-10-12 08:12:28,656 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:12:28] 2025-10-12 08:12:28,656 | INFO     | traces error code: 0
[2025-10-12 10:12:28] 2025-10-12 08:12:28,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:12:28] 2025-10-12 08:12:28,701 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:12:28] 2025-10-12 08:12:28,704 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:12:28] 2025-10-12 08:12:28,707 [wrapper] pilotpid: 3618866
[2025-10-12 10:12:28] 2025-10-12 08:12:28,711 [wrapper] Pilot exit status: 0
[2025-10-12 10:12:28] 2025-10-12 08:12:28,718 [wrapper] pandaids: 6838450869
[2025-10-12 10:12:28] 2025-10-12 08:12:28,735 [wrapper] cleanup supervisor_pilot 3637458 3618867
[2025-10-12 10:12:28] 2025-10-12 08:12:28,738 [wrapper] Test setup, not cleaning
[2025-10-12 10:12:28] 2025-10-12 08:12:28,740 [wrapper] apfmon messages muted
[2025-10-12 10:12:28] 2025-10-12 08:12:28,743 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:12:28] 2025-10-12 08:12:28,745 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:12:28]  *** Error codes and diagnostics ***
[2025-10-12 10:12:28]     "exeErrorCode": 0,
[2025-10-12 10:12:28]     "exeErrorDiag": "",
[2025-10-12 10:12:28]     "pilotErrorCode": 0,
[2025-10-12 10:12:28]     "pilotErrorDiag": "",
[2025-10-12 10:12:28]  *** Listing of results directory ***
[2025-10-12 10:12:28] total 410248
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc    557409 Oct 11 14:28 pilot3.tar.gz
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc      5112 Oct 11 14:40 queuedata.json
[2025-10-12 10:12:28] -rwx------ 1 boinc boinc     36292 Oct 11 14:41 runpilot2-wrapper.sh
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc       100 Oct 12 08:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:12:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 08:41 run_atlas
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc       105 Oct 12 08:41 job.xml
[2025-10-12 10:12:28] -rw-r--r-- 2 boinc boinc 220030848 Oct 12 08:41 EVNT.46676267._002318.pool.root.1
[2025-10-12 10:12:28] -rw-r--r-- 2 boinc boinc    569679 Oct 12 08:41 input.tar.gz
[2025-10-12 10:12:28] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:41 start_atlas.sh
[2025-10-12 10:12:28] drwxrwx--x 2 boinc boinc      4096 Oct 12 08:41 shared
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc         0 Oct 12 08:41 boinc_setup_complete
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc      6199 Oct 12 08:41 init_data.xml
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc         0 Oct 12 08:41 boinc_lockfile
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc      2550 Oct 12 08:41 pandaJob.out
[2025-10-12 10:12:28] -rw------- 1 boinc boinc    975528 Oct 12 08:41 agis_schedconf.cvmfs.json
[2025-10-12 10:12:28] -rw------- 1 boinc boinc   1560580 Oct 12 08:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:12:28] drwx------ 5 boinc boinc      4096 Oct 12 08:41 pilot3
[2025-10-12 10:12:28] -rw------- 1 boinc boinc 194022677 Oct 12 10:11 HITS.46676269._057816.pool.root.1
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc       529 Oct 12 10:11 boinc_task_state.xml
[2025-10-12 10:12:28] -rw------- 1 boinc boinc      1019 Oct 12 10:11 memory_monitor_summary.json
[2025-10-12 10:12:28] -rw------- 1 boinc boinc    276133 Oct 12 10:11 log.46676269._057816.job.log.tgz.1
[2025-10-12 10:12:28] -rw------- 1 boinc boinc        95 Oct 12 10:11 pilot_heartbeat.json
[2025-10-12 10:12:28] -rw------- 1 boinc boinc      7765 Oct 12 10:11 heartbeat.json
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc        27 Oct 12 10:12 wrapper_checkpoint.txt
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc      8192 Oct 12 10:12 boinc_mmap_file
[2025-10-12 10:12:28] -rw------- 1 boinc boinc      4824 Oct 12 10:12 pilotlog.txt
[2025-10-12 10:12:28] -rw------- 1 boinc boinc    793419 Oct 12 10:12 log.46676269._057816.job.log.1
[2025-10-12 10:12:28] -rw------- 1 boinc boinc       357 Oct 12 10:12 output.list
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc       620 Oct 12 10:12 runtime_log
[2025-10-12 10:12:28] -rw------- 1 boinc boinc   1085440 Oct 12 10:12 result.tar.gz
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc      8782 Oct 12 10:12 runtime_log.err
[2025-10-12 10:12:28] -rw------- 1 boinc boinc       659 Oct 12 10:12 6bNKDm15nR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLSgNDmtr3Iom.diag
[2025-10-12 10:12:28] -rw-r--r-- 1 boinc boinc     22336 Oct 12 10:12 stderr.txt
[2025-10-12 10:12:28] HITS file was successfully produced:
[2025-10-12 10:12:28] -rw------- 1 boinc boinc 194022677 Oct 12 10:11 shared/HITS.pool.root.1
[2025-10-12 10:12:28]  *** Contents of shared directory: ***
[2025-10-12 10:12:28] total 405996
[2025-10-12 10:12:28] -rw-r--r-- 2 boinc boinc 220030848 Oct 12 08:41 ATLAS.root_0
[2025-10-12 10:12:28] -rw-r--r-- 2 boinc boinc    569679 Oct 12 08:41 input.tar.gz
[2025-10-12 10:12:28] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:41 start_atlas.sh
[2025-10-12 10:12:28] -rw------- 1 boinc boinc 194022677 Oct 12 10:11 HITS.pool.root.1
[2025-10-12 10:12:28] -rw------- 1 boinc boinc   1085440 Oct 12 10:12 result.tar.gz
10:12:30 (3615138): run_atlas exited; CPU time 15564.687262
10:12:30 (3615138): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN