Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:51:55 (1789381): wrapper (7.7.26015): starting
12:51:55 (1789381): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 12:51:55] Arguments: --nthreads 2
[2025-10-12 12:51:55] Threads: 2
[2025-10-12 12:51:55] Checking for CVMFS
[2025-10-12 12:51:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:51:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:51:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:51:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:51:56] 2.9.2.0 817124 4192 60080 151617 1 57 25043078 36864000 0 130560 0 2516177 99.988 143636 900 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 12:51:56] CVMFS is ok
[2025-10-12 12:51:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:51:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:51:56] Further information can be found at the LHC@home message board.
[2025-10-12 12:51:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:51:56] Checking for apptainer binary...
[2025-10-12 12:51:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:51:56] Running /usr/bin/apptainer --version
[2025-10-12 12:51:56] apptainer version 1.4.1-1.1
[2025-10-12 12:51:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:51:56] thA354
[2025-10-12 12:51:56] apptainer works
[2025-10-12 12:51:56] Set ATHENA_PROC_NUMBER=2
[2025-10-12 12:51:56] Set ATHENA_CORE_NUMBER=2
[2025-10-12 12:51:56] Starting ATLAS job with PandaID=6838631702
[2025-10-12 12:51:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:04:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | -- intersect: -14608609404.00286
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | intersect: -14608609404.00286
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | chi2: 1.587541020183859
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | sum of deviations: 5286446842.999999
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | mean x: 1760270112.5
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | mean y: 2295042.080645161
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | -- intersect: -15738546650.311255
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | intersect: -15738546650.311255
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | chi2: 1.5892887785085756
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | current chi2=1.5892887785085756 (change=-0.11009216785556365 %)
[2025-10-12 15:04:28] 2025-10-12 13:03:49,932 | INFO     | right removable region: 123
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | sum of deviations: -8603853061.500002
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | mean x: 1760270417.5
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | mean y: 2323685.556451613
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | -- intersect: 25621026847.422764
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | intersect: 25621026847.422764
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | chi2: 0.17534390194033078
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | current chi2=0.17534390194033078 (change=88.95500023552 %)
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | sum of deviations: -1928741431.9999995
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | mean x: 1760270570.0
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | mean y: 2308848.5714285714
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | -- intersect: 6500085798.1566105
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | intersect: 6500085798.1566105
[2025-10-12 15:04:28] 2025-10-12 13:03:49,933 | INFO     | chi2: 0.08394208643081282
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | current chi2=0.08394208643081282 (change=52.12717094696675 %)
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | sum of deviations: 1953850740.0000007
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | mean x: 1760270722.5
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | mean y: 2299650.9298245613
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | -- intersect: -7484759948.049231
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | intersect: -7484759948.049231
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | chi2: 0.0014478472096595926
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | current chi2=0.0014478472096595926 (change=98.27518319924899 %)
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | sum of deviations: 1643956099.9999998
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | mean x: 1760270875.0
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | mean y: 2300468.4220183487
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | -- intersect: -7204597220.808609
[2025-10-12 15:04:28] 2025-10-12 13:03:49,934 | INFO     | intersect: -7204597220.808609
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | chi2: 0.0014322651094644985
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | current chi2=0.0014322651094644985 (change=1.076225453289206 %)
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | left removable region: 40
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | sum of square deviations: 177275882.0
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | sum of deviations: 344406792.99999994
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | mean x: 1760271302.0
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | mean y: 2304238.951807229
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | -- intersect: -3417503278.5296426
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | intersect: -3417503278.5296426
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | chi2: 0.00047073398283149624
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | -- intersect: -3417503278.5296426
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | current memory leak: 1.94 B/s (using 83 data points, chi2=0.00)
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | could have reported an average CPU frequency of 4542 MHz (8 samples)
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | ..............................
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | . Timing measurements:
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | . get job = 0 s
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | . initial setup = 1 s
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | . payload setup = 9 s
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | . stage-in = 0 s
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | . payload execution = 7856 s
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | . stage-out = 0 s
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | . log creation = 0 s
[2025-10-12 15:04:28] 2025-10-12 13:03:49,935 | INFO     | ..............................
[2025-10-12 15:04:28] 2025-10-12 13:03:50,239 | INFO     | 
[2025-10-12 15:04:28] 2025-10-12 13:03:50,240 | INFO     | job summary report
[2025-10-12 15:04:28] 2025-10-12 13:03:50,240 | INFO     | --------------------------------------------------
[2025-10-12 15:04:28] 2025-10-12 13:03:50,240 | INFO     | PanDA job id: 6838631702
[2025-10-12 15:04:28] 2025-10-12 13:03:50,240 | INFO     | task id: 46676269
[2025-10-12 15:04:28] 2025-10-12 13:03:50,240 | INFO     | errors: (none)
[2025-10-12 15:04:28] 2025-10-12 13:03:50,240 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:04:28] 2025-10-12 13:03:50,241 | INFO     | pilot state: finished 
[2025-10-12 15:04:28] 2025-10-12 13:03:50,241 | INFO     | transexitcode: 0
[2025-10-12 15:04:28] 2025-10-12 13:03:50,241 | INFO     | exeerrorcode: 0
[2025-10-12 15:04:28] 2025-10-12 13:03:50,241 | INFO     | exeerrordiag: 
[2025-10-12 15:04:28] 2025-10-12 13:03:50,241 | INFO     | exitcode: 0
[2025-10-12 15:04:28] 2025-10-12 13:03:50,241 | INFO     | exitmsg: OK
[2025-10-12 15:04:28] 2025-10-12 13:03:50,241 | INFO     | cpuconsumptiontime: 15374 s
[2025-10-12 15:04:28] 2025-10-12 13:03:50,242 | INFO     | nevents: 400
[2025-10-12 15:04:28] 2025-10-12 13:03:50,242 | INFO     | neventsw: 0
[2025-10-12 15:04:28] 2025-10-12 13:03:50,242 | INFO     | pid: 1799502
[2025-10-12 15:04:28] 2025-10-12 13:03:50,242 | INFO     | pgrp: 1799502
[2025-10-12 15:04:28] 2025-10-12 13:03:50,242 | INFO     | corecount: 2
[2025-10-12 15:04:28] 2025-10-12 13:03:50,242 | INFO     | event service: False
[2025-10-12 15:04:28] 2025-10-12 13:03:50,242 | INFO     | sizes: {0: 2348860, 7: 2349122, 11: 2349150, 7869: 2376972, 7871: 2385976, 7872: 2386032, 7881: 2386354}
[2025-10-12 15:04:28] 2025-10-12 13:03:50,242 | INFO     | --------------------------------------------------
[2025-10-12 15:04:28] 2025-10-12 13:03:50,243 | INFO     | 
[2025-10-12 15:04:28] 2025-10-12 13:03:50,243 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 15:04:28] 2025-10-12 13:03:50,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | job 6838631702 has completed (purged errors)
[2025-10-12 15:04:28] 2025-10-12 13:03:50,255 | INFO     | overall cleanup function is called
[2025-10-12 15:04:28] 2025-10-12 13:03:51,260 | INFO     | --- collectZombieJob: --- 10, [1799502]
[2025-10-12 15:04:28] 2025-10-12 13:03:51,261 | INFO     | zombie collector waiting for pid 1799502
[2025-10-12 15:04:28] 2025-10-12 13:03:51,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:04:28] 2025-10-12 13:03:51,261 | INFO     | collected zombie processes
[2025-10-12 15:04:28] 2025-10-12 13:03:51,261 | INFO     | will attempt to kill all subprocesses of pid=1799502
[2025-10-12 15:04:28] 2025-10-12 13:03:51,297 | INFO     | process IDs to be killed: [1799502] (in reverse order)
[2025-10-12 15:04:28] 2025-10-12 13:03:51,319 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:04:28] 2025-10-12 13:03:51,319 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:04:28] 2025-10-12 13:03:51,320 | INFO     | did not find any defunct processes belonging to 1799502
[2025-10-12 15:04:28] 2025-10-12 13:03:51,321 | INFO     | did not find any defunct processes belonging to 1799502
[2025-10-12 15:04:28] 2025-10-12 13:03:51,321 | INFO     | ready for new job
[2025-10-12 15:04:28] 2025-10-12 13:03:51,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:04:28] 2025-10-12 13:03:51,321 | INFO     | ***************************************
[2025-10-12 15:04:28] 2025-10-12 13:03:51,321 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:04:28] 2025-10-12 13:03:51,322 | INFO     | ***************************************
[2025-10-12 15:04:28] 2025-10-12 13:03:51,322 | INFO     | 
[2025-10-12 15:04:28] 2025-10-12 13:03:51,322 | INFO     | architecture information:
[2025-10-12 15:04:28] 2025-10-12 13:03:51,322 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:04:28] 2025-10-12 13:03:51,330 | INFO     | cat /etc/os-release:
[2025-10-12 15:04:28] NAME="CentOS Linux"
[2025-10-12 15:04:28] VERSION="7 (Core)"
[2025-10-12 15:04:28] ID="centos"
[2025-10-12 15:04:28] ID_LIKE="rhel fedora"
[2025-10-12 15:04:28] VERSION_ID="7"
[2025-10-12 15:04:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:04:28] ANSI_COLOR="0;31"
[2025-10-12 15:04:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:04:28] HOME_URL="https://www.centos.org/"
[2025-10-12 15:04:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:04:28] 
[2025-10-12 15:04:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:04:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:04:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:04:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:04:28] 
[2025-10-12 15:04:28] 2025-10-12 13:03:51,330 | INFO     | ***************************************
[2025-10-12 15:04:28] 2025-10-12 13:03:51,831 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 15:04:28] 2025-10-12 13:03:51,861 | INFO     | sufficient remaining disk space (498630393856 B)
[2025-10-12 15:04:28] 2025-10-12 13:03:51,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:04:28] 2025-10-12 13:03:51,862 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:04:28] 2025-10-12 13:03:51,862 | INFO     | update_server=False
[2025-10-12 15:04:28] 2025-10-12 13:03:51,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:04:28] 2025-10-12 13:03:51,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:04:28] 2025-10-12 13:03:51,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:04:28] 2025-10-12 13:03:51,864 | INFO     | aborting loop
[2025-10-12 15:04:28] 2025-10-12 13:03:52,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:04:28] 2025-10-12 13:03:52,332 | INFO     | all job control threads have been joined
[2025-10-12 15:04:28] 2025-10-12 13:03:52,565 | INFO     | all data control threads have been joined
[2025-10-12 15:04:28] 2025-10-12 13:03:52,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:04:28] 2025-10-12 13:03:52,866 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:52,869 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:52,869 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:52,883 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:52,909 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:53,166 | INFO     | all payload control threads have been joined
[2025-10-12 15:04:28] 2025-10-12 13:03:53,338 | INFO     | [job] control thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:53,528 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:53,529 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:53,571 | INFO     | [data] control thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:53,991 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:54,092 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:54,170 | INFO     | [payload] control thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:54,314 | INFO     | [job] validate thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:54,858 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:03:56,217 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:04:02,826 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:04:28] 2025-10-12 13:04:03,831 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:04:28] 2025-10-12 13:04:21,588 | INFO     | PID=1793087 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:04:28] 2025-10-12 13:04:21,588 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:04:28] 2025-10-12 13:04:21,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:04:28] 2025-10-12 13:04:21,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:04:28] 2025-10-12 13:04:23,248 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:04:28] 2025-10-12 13:04:23,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514881697600)>', '<ExcThread(monitor, started 140513948727040)>']
[2025-10-12 15:04:28] 2025-10-12 13:04:24,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:04:28] 2025-10-12 13:04:24,604 | INFO     | [monitor] control thread has ended
[2025-10-12 15:04:28] 2025-10-12 13:04:28,784 | INFO     | all workflow threads have been joined
[2025-10-12 15:04:28] 2025-10-12 13:04:28,785 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:04:28] 2025-10-12 13:04:28,785 | INFO     | traces error code: 0
[2025-10-12 15:04:28] 2025-10-12 13:04:28,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:04:28] 2025-10-12 13:04:28,829 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:04:28] 2025-10-12 13:04:28,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:04:28] 2025-10-12 13:04:28,833 [wrapper] pilotpid: 1793087
[2025-10-12 15:04:28] 2025-10-12 13:04:28,835 [wrapper] Pilot exit status: 0
[2025-10-12 15:04:28] 2025-10-12 13:04:28,841 [wrapper] pandaids: 6838631702
[2025-10-12 15:04:28] 2025-10-12 13:04:28,854 [wrapper] cleanup supervisor_pilot 1813968 1793088
[2025-10-12 15:04:28] 2025-10-12 13:04:28,856 [wrapper] Test setup, not cleaning
[2025-10-12 15:04:28] 2025-10-12 13:04:28,858 [wrapper] apfmon messages muted
[2025-10-12 15:04:28] 2025-10-12 13:04:28,860 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:04:28] 2025-10-12 13:04:28,862 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:04:28]  *** Error codes and diagnostics ***
[2025-10-12 15:04:28]     "exeErrorCode": 0,
[2025-10-12 15:04:28]     "exeErrorDiag": "",
[2025-10-12 15:04:28]     "pilotErrorCode": 0,
[2025-10-12 15:04:28]     "pilotErrorDiag": "",
[2025-10-12 15:04:28]  *** Listing of results directory ***
[2025-10-12 15:04:28] total 418856
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:50 pilot3.tar.gz
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:02 queuedata.json
[2025-10-12 15:04:28] -rwx------ 1 boinc boinc     36292 Oct 11 18:04 runpilot2-wrapper.sh
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc       100 Oct 12 12:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:04:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 12:51 run_atlas
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc       105 Oct 12 12:51 job.xml
[2025-10-12 15:04:28] -rw-r--r-- 2 boinc boinc 221677347 Oct 12 12:51 EVNT.46676267._002429.pool.root.1
[2025-10-12 15:04:28] -rw-r--r-- 2 boinc boinc    569679 Oct 12 12:51 input.tar.gz
[2025-10-12 15:04:28] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:51 start_atlas.sh
[2025-10-12 15:04:28] drwxrwx--x 2 boinc boinc      4096 Oct 12 12:51 shared
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:51 boinc_setup_complete
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc      6205 Oct 12 12:51 init_data.xml
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:51 boinc_lockfile
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc      2550 Oct 12 12:51 pandaJob.out
[2025-10-12 15:04:28] -rw------- 1 boinc boinc    975520 Oct 12 12:52 agis_schedconf.cvmfs.json
[2025-10-12 15:04:28] -rw------- 1 boinc boinc   1560580 Oct 12 12:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:04:28] drwx------ 5 boinc boinc      4096 Oct 12 12:52 pilot3
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc       529 Oct 12 15:03 boinc_task_state.xml
[2025-10-12 15:04:28] -rw------- 1 boinc boinc 200495041 Oct 12 15:03 HITS.46676269._060507.pool.root.1
[2025-10-12 15:04:28] -rw------- 1 boinc boinc      1017 Oct 12 15:03 memory_monitor_summary.json
[2025-10-12 15:04:28] -rw------- 1 boinc boinc    278661 Oct 12 15:03 log.46676269._060507.job.log.tgz.1
[2025-10-12 15:04:28] -rw------- 1 boinc boinc        95 Oct 12 15:03 pilot_heartbeat.json
[2025-10-12 15:04:28] -rw------- 1 boinc boinc      7749 Oct 12 15:03 heartbeat.json
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:04 boinc_mmap_file
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc        27 Oct 12 15:04 wrapper_checkpoint.txt
[2025-10-12 15:04:28] -rw------- 1 boinc boinc      4824 Oct 12 15:04 pilotlog.txt
[2025-10-12 15:04:28] -rw------- 1 boinc boinc   1137565 Oct 12 15:04 log.46676269._060507.job.log.1
[2025-10-12 15:04:28] -rw------- 1 boinc boinc       357 Oct 12 15:04 output.list
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc       620 Oct 12 15:04 runtime_log
[2025-10-12 15:04:28] -rw------- 1 boinc boinc   1433600 Oct 12 15:04 result.tar.gz
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc      8777 Oct 12 15:04 runtime_log.err
[2025-10-12 15:04:28] -rw------- 1 boinc boinc       660 Oct 12 15:04 iUkKDmpFrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtqgNDmnyr7bn.diag
[2025-10-12 15:04:28] -rw-r--r-- 1 boinc boinc     20886 Oct 12 15:04 stderr.txt
[2025-10-12 15:04:28] HITS file was successfully produced:
[2025-10-12 15:04:28] -rw------- 1 boinc boinc 200495041 Oct 12 15:03 shared/HITS.pool.root.1
[2025-10-12 15:04:28]  *** Contents of shared directory: ***
[2025-10-12 15:04:28] total 414264
[2025-10-12 15:04:28] -rw-r--r-- 2 boinc boinc 221677347 Oct 12 12:51 ATLAS.root_0
[2025-10-12 15:04:28] -rw-r--r-- 2 boinc boinc    569679 Oct 12 12:51 input.tar.gz
[2025-10-12 15:04:28] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:51 start_atlas.sh
[2025-10-12 15:04:28] -rw------- 1 boinc boinc 200495041 Oct 12 15:03 HITS.pool.root.1
[2025-10-12 15:04:28] -rw------- 1 boinc boinc   1433600 Oct 12 15:04 result.tar.gz
15:04:30 (1789381): run_atlas exited; CPU time 15411.838589
15:04:30 (1789381): called boinc_finish(0)

</stderr_txt>
]]>

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