Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:44 (21745): wrapper (7.7.26015): starting
17:04:44 (21745): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:04:44] Arguments: --nthreads 8
[2025-10-11 17:04:44] Threads: 8
[2025-10-11 17:04:44] Checking for CVMFS
[2025-10-11 17:04:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:04:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:04:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:04:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:04:44] 2.11.2.0 2866 7575 75236 151595 2 59 13578905 20275201 1 130560 0 4571289 99.989 249528 36480 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:04:44] CVMFS is ok
[2025-10-11 17:04:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:04:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:04:44] Further information can be found at the LHC@home message board.
[2025-10-11 17:04:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:04:44] Checking for apptainer binary...
[2025-10-11 17:04:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:04:44] Running /usr/bin/apptainer --version
[2025-10-11 17:04:44] apptainer version 1.3.2-1.el7
[2025-10-11 17:04:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:04:46] c-204-35.aglt2.org
[2025-10-11 17:04:46] apptainer works
[2025-10-11 17:04:46] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:04:46] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:04:46] Starting ATLAS job with PandaID=6826206087
[2025-10-11 17:04:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:33:24]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:33:24] 2025-10-11 23:32:42,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:33:24] 2025-10-11 23:32:42,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:33:24] 2025-10-11 23:32:42,694 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:33:24] 2025-10-11 23:32:42,694 | INFO     | sum of square deviations: 945282840.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,695 | INFO     | sum of deviations: 8584617718.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,695 | INFO     | mean x: 1760221127.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,695 | INFO     | mean y: 2487869.172413793
[2025-10-11 19:33:24] 2025-10-11 23:32:42,695 | INFO     | -- intersect: -15983019150.548933
[2025-10-11 19:33:24] 2025-10-11 23:32:42,696 | INFO     | intersect: -15983019150.548933
[2025-10-11 19:33:24] 2025-10-11 23:32:42,696 | INFO     | chi2: 2.2597976529033383
[2025-10-11 19:33:24] 2025-10-11 23:32:42,696 | INFO     | sum of square deviations: 850825255.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,697 | INFO     | sum of deviations: 18305468436.5
[2025-10-11 19:33:24] 2025-10-11 23:32:42,697 | INFO     | mean x: 1760220974.5
[2025-10-11 19:33:24] 2025-10-11 23:32:42,697 | INFO     | mean y: 2503099.6642857143
[2025-10-11 19:33:24] 2025-10-11 23:32:42,697 | INFO     | -- intersect: -37868574775.163284
[2025-10-11 19:33:24] 2025-10-11 23:32:42,697 | INFO     | intersect: -37868574775.163284
[2025-10-11 19:33:24] 2025-10-11 23:32:42,698 | INFO     | chi2: 1.3879275858641928
[2025-10-11 19:33:24] 2025-10-11 23:32:42,698 | INFO     | current chi2=1.3879275858641928 (change=38.581775935512894 %)
[2025-10-11 19:33:24] 2025-10-11 23:32:42,698 | INFO     | sum of square deviations: 762879420.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,699 | INFO     | sum of deviations: 17556703715.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,699 | INFO     | mean x: 1760220822.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,699 | INFO     | mean y: 2501800.7851851853
[2025-10-11 19:33:24] 2025-10-11 23:32:42,699 | INFO     | -- intersect: -40506751214.36071
[2025-10-11 19:33:24] 2025-10-11 23:32:42,699 | INFO     | intersect: -40506751214.36071
[2025-10-11 19:33:24] 2025-10-11 23:32:42,699 | INFO     | chi2: 1.3896066815241512
[2025-10-11 19:33:24] 2025-10-11 23:32:42,700 | INFO     | current chi2=1.3896066815241512 (change=-0.12097862143959741 %)
[2025-10-11 19:33:24] 2025-10-11 23:32:42,700 | INFO     | right removable region: 134
[2025-10-11 19:33:24] 2025-10-11 23:32:42,700 | INFO     | sum of square deviations: 850825255.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,701 | INFO     | sum of deviations: -11692265127.5
[2025-10-11 19:33:24] 2025-10-11 23:32:42,701 | INFO     | mean x: 1760221279.5
[2025-10-11 19:33:24] 2025-10-11 23:32:42,701 | INFO     | mean y: 2520047.535714286
[2025-10-11 19:33:24] 2025-10-11 23:32:42,701 | INFO     | -- intersect: 24191945269.735165
[2025-10-11 19:33:24] 2025-10-11 23:32:42,701 | INFO     | intersect: 24191945269.735165
[2025-10-11 19:33:24] 2025-10-11 23:32:42,701 | INFO     | chi2: 0.9408156692632118
[2025-10-11 19:33:24] 2025-10-11 23:32:42,702 | INFO     | current chi2=0.9408156692632118 (change=58.36726053527526 %)
[2025-10-11 19:33:24] 2025-10-11 23:32:42,702 | INFO     | sum of square deviations: 762879420.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,702 | INFO     | sum of deviations: -6964482423.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,703 | INFO     | mean x: 1760221432.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,703 | INFO     | mean y: 2511832.303703704
[2025-10-11 19:33:24] 2025-10-11 23:32:42,703 | INFO     | -- intersect: 16071933686.352262
[2025-10-11 19:33:24] 2025-10-11 23:32:42,703 | INFO     | intersect: 16071933686.352262
[2025-10-11 19:33:24] 2025-10-11 23:32:42,703 | INFO     | chi2: 0.908048024509089
[2025-10-11 19:33:24] 2025-10-11 23:32:42,703 | INFO     | current chi2=0.908048024509089 (change=3.482897428758222 %)
[2025-10-11 19:33:24] 2025-10-11 23:32:42,703 | INFO     | left removable region: 20
[2025-10-11 19:33:24] 2025-10-11 23:32:42,704 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 19:33:24] 2025-10-11 23:32:42,704 | INFO     | sum of deviations: 679022354.0
[2025-10-11 19:33:24] 2025-10-11 23:32:42,704 | INFO     | mean x: 1760221401.5
[2025-10-11 19:33:24] 2025-10-11 23:32:42,704 | INFO     | mean y: 2532618.01754386
[2025-10-11 19:33:24] 2025-10-11 23:32:42,705 | INFO     | -- intersect: -2599374622.9896493
[2025-10-11 19:33:24] 2025-10-11 23:32:42,705 | INFO     | intersect: -2599374622.9896493
[2025-10-11 19:33:24] 2025-10-11 23:32:42,705 | INFO     | chi2: 0.00011832818457207482
[2025-10-11 19:33:24] 2025-10-11 23:32:42,705 | INFO     | -- intersect: -2599374622.9896493
[2025-10-11 19:33:24] 2025-10-11 23:32:42,705 | INFO     | current memory leak: 1.48 B/s (using 114 data points, chi2=0.00)
[2025-10-11 19:33:24] 2025-10-11 23:32:42,706 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2025-10-11 19:33:24] 2025-10-11 23:32:42,706 | INFO     | ..............................
[2025-10-11 19:33:24] 2025-10-11 23:32:42,706 | INFO     | . Timing measurements:
[2025-10-11 19:33:24] 2025-10-11 23:32:42,706 | INFO     | . get job = 0 s
[2025-10-11 19:33:24] 2025-10-11 23:32:42,706 | INFO     | . initial setup = 2 s
[2025-10-11 19:33:24] 2025-10-11 23:32:42,706 | INFO     | . payload setup = 8 s
[2025-10-11 19:33:24] 2025-10-11 23:32:42,706 | INFO     | . stage-in = 0 s
[2025-10-11 19:33:24] 2025-10-11 23:32:42,707 | INFO     | . payload execution = 8818 s
[2025-10-11 19:33:24] 2025-10-11 23:32:42,707 | INFO     | . stage-out = 0 s
[2025-10-11 19:33:24] 2025-10-11 23:32:42,707 | INFO     | . log creation = 0 s
[2025-10-11 19:33:24] 2025-10-11 23:32:42,707 | INFO     | ..............................
[2025-10-11 19:33:24] 2025-10-11 23:32:43,053 | INFO     | 
[2025-10-11 19:33:24] 2025-10-11 23:32:43,053 | INFO     | job summary report
[2025-10-11 19:33:24] 2025-10-11 23:32:43,053 | INFO     | --------------------------------------------------
[2025-10-11 19:33:24] 2025-10-11 23:32:43,053 | INFO     | PanDA job id: 6826206087
[2025-10-11 19:33:24] 2025-10-11 23:32:43,053 | INFO     | task id: 46373048
[2025-10-11 19:33:24] 2025-10-11 23:32:43,054 | INFO     | errors: (none)
[2025-10-11 19:33:24] 2025-10-11 23:32:43,054 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:33:24] 2025-10-11 23:32:43,054 | INFO     | pilot state: finished 
[2025-10-11 19:33:24] 2025-10-11 23:32:43,054 | INFO     | transexitcode: 0
[2025-10-11 19:33:24] 2025-10-11 23:32:43,054 | INFO     | exeerrorcode: 0
[2025-10-11 19:33:24] 2025-10-11 23:32:43,054 | INFO     | exeerrordiag: 
[2025-10-11 19:33:24] 2025-10-11 23:32:43,054 | INFO     | exitcode: 0
[2025-10-11 19:33:24] 2025-10-11 23:32:43,054 | INFO     | exitmsg: OK
[2025-10-11 19:33:24] 2025-10-11 23:32:43,054 | INFO     | cpuconsumptiontime: 66698 s
[2025-10-11 19:33:24] 2025-10-11 23:32:43,055 | INFO     | nevents: 400
[2025-10-11 19:33:24] 2025-10-11 23:32:43,055 | INFO     | neventsw: 0
[2025-10-11 19:33:24] 2025-10-11 23:32:43,055 | INFO     | pid: 534
[2025-10-11 19:33:24] 2025-10-11 23:32:43,055 | INFO     | pgrp: 534
[2025-10-11 19:33:24] 2025-10-11 23:32:43,055 | INFO     | corecount: 8
[2025-10-11 19:33:24] 2025-10-11 23:32:43,055 | INFO     | event service: False
[2025-10-11 19:33:24] 2025-10-11 23:32:43,055 | INFO     | sizes: {0: 2348670, 1: 2348869, 7: 2349131, 12: 2349159, 8830: 2377309, 8833: 2386307, 8835: 2386491, 8842: 2386685}
[2025-10-11 19:33:24] 2025-10-11 23:32:43,055 | INFO     | --------------------------------------------------
[2025-10-11 19:33:24] 2025-10-11 23:32:43,055 | INFO     | 
[2025-10-11 19:33:24] 2025-10-11 23:32:43,056 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 19:33:24] 2025-10-11 23:32:43,084 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,085 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:33:24] 2025-10-11 23:32:43,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:33:24] 2025-10-11 23:32:43,088 | INFO     | job 6826206087 has completed (purged errors)
[2025-10-11 19:33:24] 2025-10-11 23:32:43,088 | INFO     | overall cleanup function is called
[2025-10-11 19:33:24] 2025-10-11 23:32:44,096 | INFO     | --- collectZombieJob: --- 10, [534]
[2025-10-11 19:33:24] 2025-10-11 23:32:44,096 | INFO     | zombie collector waiting for pid 534
[2025-10-11 19:33:24] 2025-10-11 23:32:44,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:33:24] 2025-10-11 23:32:44,097 | INFO     | collected zombie processes
[2025-10-11 19:33:24] 2025-10-11 23:32:44,097 | INFO     | will attempt to kill all subprocesses of pid=534
[2025-10-11 19:33:24] 2025-10-11 23:32:44,185 | INFO     | process IDs to be killed: [534] (in reverse order)
[2025-10-11 19:33:24] 2025-10-11 23:32:44,240 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:33:24] 2025-10-11 23:32:44,241 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:33:24] 2025-10-11 23:32:44,244 | INFO     | did not find any defunct processes belonging to 534
[2025-10-11 19:33:24] 2025-10-11 23:32:44,247 | INFO     | did not find any defunct processes belonging to 534
[2025-10-11 19:33:24] 2025-10-11 23:32:44,247 | INFO     | ready for new job
[2025-10-11 19:33:24] 2025-10-11 23:32:44,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:33:24] 2025-10-11 23:32:44,249 | INFO     | ***************************************
[2025-10-11 19:33:24] 2025-10-11 23:32:44,249 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 19:33:24] 2025-10-11 23:32:44,249 | INFO     | ***************************************
[2025-10-11 19:33:24] 2025-10-11 23:32:44,249 | INFO     | 
[2025-10-11 19:33:24] 2025-10-11 23:32:44,250 | INFO     | architecture information:
[2025-10-11 19:33:24] 2025-10-11 23:32:44,250 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:33:24] 2025-10-11 23:32:44,269 | INFO     | cat /etc/os-release:
[2025-10-11 19:33:24] NAME="CentOS Linux"
[2025-10-11 19:33:24] VERSION="7 (Core)"
[2025-10-11 19:33:24] ID="centos"
[2025-10-11 19:33:24] ID_LIKE="rhel fedora"
[2025-10-11 19:33:24] VERSION_ID="7"
[2025-10-11 19:33:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:33:24] ANSI_COLOR="0;31"
[2025-10-11 19:33:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:33:24] HOME_URL="https://www.centos.org/"
[2025-10-11 19:33:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:33:24] 
[2025-10-11 19:33:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:33:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:33:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:33:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:33:24] 
[2025-10-11 19:33:24] 2025-10-11 23:32:44,269 | INFO     | ***************************************
[2025-10-11 19:33:24] 2025-10-11 23:32:44,772 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 19:33:24] 2025-10-11 23:32:44,792 | INFO     | sufficient remaining disk space (18557698048 B)
[2025-10-11 19:33:24] 2025-10-11 23:32:44,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:33:24] 2025-10-11 23:32:44,793 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:33:24] 2025-10-11 23:32:44,793 | INFO     | update_server=False
[2025-10-11 19:33:24] 2025-10-11 23:32:44,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:33:24] 2025-10-11 23:32:44,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:33:24] 2025-10-11 23:32:44,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:33:24] 2025-10-11 23:32:44,888 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 19:33:24] 2025-10-11 23:32:44,888 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 19:33:24] 2025-10-11 23:32:44,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:33:24] 2025-10-11 23:32:44,889 | INFO     | will abort loop
[2025-10-11 19:33:24] 2025-10-11 23:32:45,620 | INFO     | all data control threads have been joined
[2025-10-11 19:33:24] 2025-10-11 23:32:45,710 | INFO     | all payload control threads have been joined
[2025-10-11 19:33:24] 2025-10-11 23:32:45,799 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:45,799 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:45,828 | INFO     | all job control threads have been joined
[2025-10-11 19:33:24] 2025-10-11 23:32:45,894 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:45,955 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:46,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:46,498 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:46,624 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:46,625 | INFO     | [data] control thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:46,715 | INFO     | [payload] control thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:46,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:33:24] 2025-10-11 23:32:46,800 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:46,834 | INFO     | [job] control thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:47,005 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:47,085 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:47,085 | INFO     | [job] validate thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:47,087 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:32:50,724 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:33:24] 2025-10-11 23:33:15,184 | INFO     | PID=25491 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 19:33:24] 2025-10-11 23:33:15,185 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:33:24] 2025-10-11 23:33:15,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:33:24] 2025-10-11 23:33:15,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:33:24] 2025-10-11 23:33:18,023 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:33:24] 2025-10-11 23:33:18,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140659000084288)>', '<ExcThread(monitor, started 140657821738752)>']
[2025-10-11 19:33:24] 2025-10-11 23:33:19,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:33:24] 2025-10-11 23:33:19,203 | INFO     | [monitor] control thread has ended
[2025-10-11 19:33:24] 2025-10-11 23:33:24,018 | INFO     | all workflow threads have been joined
[2025-10-11 19:33:24] 2025-10-11 23:33:24,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:33:24] 2025-10-11 23:33:24,018 | INFO     | traces error code: 0
[2025-10-11 19:33:24] 2025-10-11 23:33:24,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:33:24] 2025-10-11 23:33:24,119 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:33:24] 2025-10-11 23:33:24,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:33:24] 2025-10-11 23:33:24,129 [wrapper] pilotpid: 25491
[2025-10-11 19:33:24] 2025-10-11 23:33:24,134 [wrapper] Pilot exit status: 0
[2025-10-11 19:33:24] 2025-10-11 23:33:24,153 [wrapper] pandaids: 6826206087
[2025-10-11 19:33:24] 2025-10-11 23:33:24,206 [wrapper] cleanup supervisor_pilot  8988 25492
[2025-10-11 19:33:24] 2025-10-11 23:33:24,211 [wrapper] Test setup, not cleaning
[2025-10-11 19:33:24] 2025-10-11 23:33:24,216 [wrapper] apfmon messages muted
[2025-10-11 19:33:24] 2025-10-11 23:33:24,221 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:33:24] 2025-10-11 23:33:24,226 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:33:24]  *** Error codes and diagnostics ***
[2025-10-11 19:33:24]     "exeErrorCode": 0,
[2025-10-11 19:33:24]     "exeErrorDiag": "",
[2025-10-11 19:33:24]     "pilotErrorCode": 0,
[2025-10-11 19:33:24]     "pilotErrorDiag": "",
[2025-10-11 19:33:24]  *** Listing of results directory ***
[2025-10-11 19:33:24] total 410996
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas      5112 Sep 30 17:23 queuedata.json
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas    552446 Sep 30 17:23 pilot3.tar.gz
[2025-10-11 19:33:24] -rwx------ 1 boincer umatlas     36292 Sep 30 17:24 runpilot2-wrapper.sh
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas       100 Oct 11 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:33:24] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 17:04 run_atlas
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas       105 Oct 11 17:04 job.xml
[2025-10-11 19:33:24] -rw-r--r-- 2 boincer umatlas 220385067 Oct 11 17:04 EVNT.46373045._002340.pool.root.1
[2025-10-11 19:33:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:04 start_atlas.sh
[2025-10-11 19:33:24] drwxrwx--x 2 boincer umatlas      4096 Oct 11 17:04 shared
[2025-10-11 19:33:24] -rw-r--r-- 2 boincer umatlas    565607 Oct 11 17:04 input.tar.gz
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas         0 Oct 11 17:04 boinc_lockfile
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas      2538 Oct 11 17:04 pandaJob.out
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas    975528 Oct 11 17:05 agis_schedconf.cvmfs.json
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas   1560580 Oct 11 17:05 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:33:24] drwx------ 4 boincer umatlas      4096 Oct 11 17:05 pilot3
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 19:28 init_data.xml
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas 193366334 Oct 11 19:31 HITS.46373048._071227.pool.root.1
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas       529 Oct 11 19:32 boinc_task_state.xml
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas      1050 Oct 11 19:32 memory_monitor_summary.json
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas    376679 Oct 11 19:32 log.46373048._071227.job.log.tgz.1
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas      7856 Oct 11 19:32 heartbeat.json
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas        27 Oct 11 19:32 wrapper_checkpoint.txt
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 19:32 boinc_mmap_file
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas        95 Oct 11 19:33 pilot_heartbeat.json
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas      4932 Oct 11 19:33 pilotlog.txt
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas   1231787 Oct 11 19:33 log.46373048._071227.job.log.1
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas       357 Oct 11 19:33 output.list
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas       620 Oct 11 19:33 runtime_log
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas   1628160 Oct 11 19:33 result.tar.gz
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas       660 Oct 11 19:33 waRKDmA1wN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQ09MDmkAzeQo.diag
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 19:33 runtime_log.err
[2025-10-11 19:33:24] -rw-r--r-- 1 boincer umatlas     20862 Oct 11 19:33 stderr.txt
[2025-10-11 19:33:24] HITS file was successfully produced:
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas 193366334 Oct 11 19:31 shared/HITS.pool.root.1
[2025-10-11 19:33:24]  *** Contents of shared directory: ***
[2025-10-11 19:33:24] total 406228
[2025-10-11 19:33:24] -rw-r--r-- 2 boincer umatlas 220385067 Oct 11 17:04 ATLAS.root_0
[2025-10-11 19:33:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:04 start_atlas.sh
[2025-10-11 19:33:24] -rw-r--r-- 2 boincer umatlas    565607 Oct 11 17:04 input.tar.gz
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas 193366334 Oct 11 19:31 HITS.pool.root.1
[2025-10-11 19:33:24] -rw------- 1 boincer umatlas   1628160 Oct 11 19:33 result.tar.gz
19:33:26 (21745): run_atlas exited; CPU time 66719.439328
19:33:26 (21745): called boinc_finish(0)

</stderr_txt>
]]>

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