Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:53 (3573570): wrapper (7.7.26015): starting
00:01:53 (3573570): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:01:53] Arguments: --nthreads 12
[2025-10-12 00:01:53] Threads: 12
[2025-10-12 00:01:53] Checking for CVMFS
[2025-10-12 00:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:01:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:01:54] 2.13.2.0 21981 52375 131952 151606 1 332 36315530 40960000 9531 16776704 0 44378394 99.730 31971191 34426 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:01:54] CVMFS is ok
[2025-10-12 00:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:01:55] Further information can be found at the LHC@home message board.
[2025-10-12 00:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:01:55] Checking for apptainer binary...
[2025-10-12 00:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:01:55] Running /usr/bin/apptainer --version
[2025-10-12 00:01:56] apptainer version 1.4.3-1.el9
[2025-10-12 00:01:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:01:57] c-211-7.aglt2.org
[2025-10-12 00:01:57] apptainer works
[2025-10-12 00:01:57] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:01:57] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:01:57] Starting ATLAS job with PandaID=6838849863
[2025-10-12 00:01:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:17:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:17:16] 2025-10-12 09:16:22,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:17:16] 2025-10-12 09:16:22,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:17:16] 2025-10-12 09:16:22,189 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:17:16] 2025-10-12 09:16:22,189 | INFO     | sum of square deviations: 9060789512.607132
[2025-10-12 05:17:16] 2025-10-12 09:16:22,192 | INFO     | sum of deviations: 123189348976.89284
[2025-10-12 05:17:16] 2025-10-12 09:16:22,193 | INFO     | mean x: 1760251182.5357144
[2025-10-12 05:17:16] 2025-10-12 09:16:22,193 | INFO     | mean y: 2625486.600649351
[2025-10-12 05:17:16] 2025-10-12 09:16:22,193 | INFO     | -- intersect: -23929527104.590725
[2025-10-12 05:17:16] 2025-10-12 09:16:22,193 | INFO     | intersect: -23929527104.590725
[2025-10-12 05:17:16] 2025-10-12 09:16:22,194 | INFO     | chi2: 3.3550805253804645
[2025-10-12 05:17:16] 2025-10-12 09:16:22,194 | INFO     | sum of square deviations: 8626964175.768991
[2025-10-12 05:17:16] 2025-10-12 09:16:22,197 | INFO     | sum of deviations: 141370634384.91742
[2025-10-12 05:17:16] 2025-10-12 09:16:22,197 | INFO     | mean x: 1760251030.0858085
[2025-10-12 05:17:16] 2025-10-12 09:16:22,198 | INFO     | mean y: 2631778.887788779
[2025-10-12 05:17:16] 2025-10-12 09:16:22,198 | INFO     | -- intersect: -28842718651.439373
[2025-10-12 05:17:16] 2025-10-12 09:16:22,198 | INFO     | intersect: -28842718651.439373
[2025-10-12 05:17:16] 2025-10-12 09:16:22,198 | INFO     | chi2: 2.6550464822122786
[2025-10-12 05:17:16] 2025-10-12 09:16:22,199 | INFO     | current chi2=2.6550464822122786 (change=20.864895428666426 %)
[2025-10-12 05:17:16] 2025-10-12 09:16:22,199 | INFO     | right removable region: 302
[2025-10-12 05:17:16] 2025-10-12 09:16:22,199 | INFO     | sum of square deviations: 8626393825.768995
[2025-10-12 05:17:16] 2025-10-12 09:16:22,202 | INFO     | sum of deviations: 48800767156.53139
[2025-10-12 05:17:16] 2025-10-12 09:16:22,202 | INFO     | mean x: 1760251335.0858085
[2025-10-12 05:17:16] 2025-10-12 09:16:22,202 | INFO     | mean y: 2651519.402640264
[2025-10-12 05:17:16] 2025-10-12 09:16:22,203 | INFO     | -- intersect: -9955346837.209417
[2025-10-12 05:17:16] 2025-10-12 09:16:22,203 | INFO     | intersect: -9955346837.209417
[2025-10-12 05:17:16] 2025-10-12 09:16:22,203 | INFO     | chi2: 1.2363129147064436
[2025-10-12 05:17:16] 2025-10-12 09:16:22,204 | INFO     | current chi2=1.2363129147064436 (change=63.15102110503752 %)
[2025-10-12 05:17:16] 2025-10-12 09:16:22,204 | INFO     | sum of square deviations: 8206110157.130893
[2025-10-12 05:17:16] 2025-10-12 09:16:22,207 | INFO     | sum of deviations: 14068131528.30872
[2025-10-12 05:17:16] 2025-10-12 09:16:22,207 | INFO     | mean x: 1760251487.6342282
[2025-10-12 05:17:16] 2025-10-12 09:16:22,207 | INFO     | mean y: 2664114.3422818794
[2025-10-12 05:17:16] 2025-10-12 09:16:22,207 | INFO     | -- intersect: -3015020144.9191694
[2025-10-12 05:17:16] 2025-10-12 09:16:22,207 | INFO     | intersect: -3015020144.9191694
[2025-10-12 05:17:16] 2025-10-12 09:16:22,208 | INFO     | chi2: 0.8530724442883414
[2025-10-12 05:17:16] 2025-10-12 09:16:22,208 | INFO     | current chi2=0.8530724442883414 (change=30.998662705800555 %)
[2025-10-12 05:17:16] 2025-10-12 09:16:22,209 | INFO     | sum of square deviations: 7799687212.047791
[2025-10-12 05:17:16] 2025-10-12 09:16:22,212 | INFO     | sum of deviations: -4393463639.092144
[2025-10-12 05:17:16] 2025-10-12 09:16:22,212 | INFO     | mean x: 1760251640.1843004
[2025-10-12 05:17:16] 2025-10-12 09:16:22,212 | INFO     | mean y: 2671025.5017064847
[2025-10-12 05:17:16] 2025-10-12 09:16:22,212 | INFO     | -- intersect: 994198168.3922985
[2025-10-12 05:17:16] 2025-10-12 09:16:22,212 | INFO     | intersect: 994198168.3922985
[2025-10-12 05:17:16] 2025-10-12 09:16:22,213 | INFO     | chi2: 0.7229777770951016
[2025-10-12 05:17:16] 2025-10-12 09:16:22,213 | INFO     | current chi2=0.7229777770951016 (change=15.250131224408342 %)
[2025-10-12 05:17:16] 2025-10-12 09:16:22,213 | INFO     | left removable region: 30
[2025-10-12 05:17:16] 2025-10-12 09:16:22,214 | INFO     | sum of square deviations: 6239673234.996324
[2025-10-12 05:17:16] 2025-10-12 09:16:22,216 | INFO     | sum of deviations: 11615316834.338238
[2025-10-12 05:17:16] 2025-10-12 09:16:22,216 | INFO     | mean x: 1760251914.8786764
[2025-10-12 05:17:16] 2025-10-12 09:16:22,216 | INFO     | mean y: 2679660.161764706
[2025-10-12 05:17:16] 2025-10-12 09:16:22,216 | INFO     | -- intersect: -3274075857.2412963
[2025-10-12 05:17:16] 2025-10-12 09:16:22,217 | INFO     | intersect: -3274075857.2412963
[2025-10-12 05:17:16] 2025-10-12 09:16:22,217 | INFO     | chi2: 0.007146580794688664
[2025-10-12 05:17:16] 2025-10-12 09:16:22,217 | INFO     | -- intersect: -3274075857.2412963
[2025-10-12 05:17:16] 2025-10-12 09:16:22,218 | INFO     | current memory leak: 1.86 B/s (using 272 data points, chi2=0.01)
[2025-10-12 05:17:16] 2025-10-12 09:16:22,218 | INFO     | could have reported an average CPU frequency of 2480 MHz (14 samples)
[2025-10-12 05:17:16] 2025-10-12 09:16:22,218 | INFO     | ..............................
[2025-10-12 05:17:16] 2025-10-12 09:16:22,219 | INFO     | . Timing measurements:
[2025-10-12 05:17:16] 2025-10-12 09:16:22,219 | INFO     | . get job = 0 s
[2025-10-12 05:17:16] 2025-10-12 09:16:22,219 | INFO     | . initial setup = 6 s
[2025-10-12 05:17:16] 2025-10-12 09:16:22,219 | INFO     | . payload setup = 14 s
[2025-10-12 05:17:16] 2025-10-12 09:16:22,219 | INFO     | . stage-in = 0 s
[2025-10-12 05:17:16] 2025-10-12 09:16:22,219 | INFO     | . payload execution = 18761 s
[2025-10-12 05:17:16] 2025-10-12 09:16:22,219 | INFO     | . stage-out = 2 s
[2025-10-12 05:17:16] 2025-10-12 09:16:22,220 | INFO     | . log creation = 0 s
[2025-10-12 05:17:16] 2025-10-12 09:16:22,220 | INFO     | ..............................
[2025-10-12 05:17:16] 2025-10-12 09:16:22,352 | INFO     | 
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | job summary report
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | --------------------------------------------------
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | PanDA job id: 6838849863
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | task id: 46676269
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | errors: (none)
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | pilot state: finished 
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | transexitcode: 0
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | exeerrorcode: 0
[2025-10-12 05:17:16] 2025-10-12 09:16:22,353 | INFO     | exeerrordiag: 
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | exitcode: 0
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | exitmsg: OK
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | cpuconsumptiontime: 58663 s
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | nevents: 400
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | neventsw: 0
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | pid: 3583787
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | pgrp: 3583787
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | corecount: 12
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | event service: False
[2025-10-12 05:17:16] 2025-10-12 09:16:22,354 | INFO     | sizes: {0: 2348028, 1: 2348713, 2: 2348912, 13: 2349230, 23: 2349230, 18779: 2381656, 18780: 2381783, 18782: 2390837, 18784: 2390893, 18793: 2391087}
[2025-10-12 05:17:16] 2025-10-12 09:16:22,355 | INFO     | --------------------------------------------------
[2025-10-12 05:17:16] 2025-10-12 09:16:22,355 | INFO     | 
[2025-10-12 05:17:16] 2025-10-12 09:16:22,355 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 05:17:16] 2025-10-12 09:16:22,378 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,379 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,379 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,379 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,379 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,380 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:17:16] 2025-10-12 09:16:22,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:17:16] 2025-10-12 09:16:22,381 | INFO     | job 6838849863 has completed (purged errors)
[2025-10-12 05:17:16] 2025-10-12 09:16:22,381 | INFO     | overall cleanup function is called
[2025-10-12 05:17:16] 2025-10-12 09:16:23,390 | INFO     | --- collectZombieJob: --- 10, [3583787]
[2025-10-12 05:17:16] 2025-10-12 09:16:23,390 | INFO     | zombie collector waiting for pid 3583787
[2025-10-12 05:17:16] 2025-10-12 09:16:23,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:17:16] 2025-10-12 09:16:23,390 | INFO     | collected zombie processes
[2025-10-12 05:17:16] 2025-10-12 09:16:23,391 | INFO     | will attempt to kill all subprocesses of pid=3583787
[2025-10-12 05:17:16] 2025-10-12 09:16:23,692 | INFO     | process IDs to be killed: [3583787] (in reverse order)
[2025-10-12 05:17:16] 2025-10-12 09:16:23,812 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:17:16] 2025-10-12 09:16:23,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:17:16] 2025-10-12 09:16:23,847 | INFO     | did not find any defunct processes belonging to 3583787
[2025-10-12 05:17:16] 2025-10-12 09:16:23,856 | INFO     | did not find any defunct processes belonging to 3583787
[2025-10-12 05:17:16] 2025-10-12 09:16:23,856 | INFO     | ready for new job
[2025-10-12 05:17:16] 2025-10-12 09:16:23,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:17:16] 2025-10-12 09:16:23,859 | INFO     | ***************************************
[2025-10-12 05:17:16] 2025-10-12 09:16:23,860 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:17:16] 2025-10-12 09:16:23,860 | INFO     | ***************************************
[2025-10-12 05:17:16] 2025-10-12 09:16:23,860 | INFO     | 
[2025-10-12 05:17:16] 2025-10-12 09:16:23,863 | INFO     | architecture information:
[2025-10-12 05:17:16] 2025-10-12 09:16:23,864 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:17:16] 2025-10-12 09:16:23,884 | INFO     | cat /etc/os-release:
[2025-10-12 05:17:16] NAME="CentOS Linux"
[2025-10-12 05:17:16] VERSION="7 (Core)"
[2025-10-12 05:17:16] ID="centos"
[2025-10-12 05:17:16] ID_LIKE="rhel fedora"
[2025-10-12 05:17:16] VERSION_ID="7"
[2025-10-12 05:17:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:17:16] ANSI_COLOR="0;31"
[2025-10-12 05:17:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:17:16] HOME_URL="https://www.centos.org/"
[2025-10-12 05:17:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:17:16] 
[2025-10-12 05:17:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:17:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:17:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:17:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:17:16] 
[2025-10-12 05:17:16] 2025-10-12 09:16:23,885 | INFO     | ***************************************
[2025-10-12 05:17:16] 2025-10-12 09:16:24,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 05:17:16] 2025-10-12 09:16:24,421 | INFO     | sufficient remaining disk space (63801655296 B)
[2025-10-12 05:17:16] 2025-10-12 09:16:24,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:17:16] 2025-10-12 09:16:24,422 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:17:16] 2025-10-12 09:16:24,422 | INFO     | update_server=False
[2025-10-12 05:17:16] 2025-10-12 09:16:24,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:17:16] 2025-10-12 09:16:24,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:17:16] 2025-10-12 09:16:24,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:17:16] 2025-10-12 09:16:24,706 | INFO     | all data control threads have been joined
[2025-10-12 05:17:16] 2025-10-12 09:16:25,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:17:16] 2025-10-12 09:16:25,228 | INFO     | aborting loop
[2025-10-12 05:17:16] 2025-10-12 09:16:25,429 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:25,469 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:25,714 | INFO     | [data] control thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:25,796 | INFO     | all payload control threads have been joined
[2025-10-12 05:17:16] 2025-10-12 09:16:25,935 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:25,958 | INFO     | [job] validate thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:25,995 | INFO     | all job control threads have been joined
[2025-10-12 05:17:16] 2025-10-12 09:16:26,012 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:26,043 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:26,233 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:26,353 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:26,453 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:26,537 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:26,801 | INFO     | [payload] control thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:27,000 | INFO     | [job] control thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:27,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:17:16] 2025-10-12 09:16:28,368 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:28,430 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:35,140 | INFO     | job.realtimelogging is not enabled
[2025-10-12 05:17:16] 2025-10-12 09:16:36,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:17:16] 2025-10-12 09:16:54,232 | INFO     | PID=3577298 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:17:16] 2025-10-12 09:16:54,232 | INFO     | .. there are 8 such processes running
[2025-10-12 05:17:16] 2025-10-12 09:16:54,233 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:17:16] 2025-10-12 09:16:54,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:17:16] 2025-10-12 09:16:54,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:17:16] 2025-10-12 09:17:10,779 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:17:16] 2025-10-12 09:17:10,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139901412099904)>', '<ExcThread(monitor, started 139900682749696)>']
[2025-10-12 05:17:16] 2025-10-12 09:17:11,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:17:16] 2025-10-12 09:17:11,325 | INFO     | [monitor] control thread has ended
[2025-10-12 05:17:16] 2025-10-12 09:17:15,901 | INFO     | all workflow threads have been joined
[2025-10-12 05:17:16] 2025-10-12 09:17:15,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:17:16] 2025-10-12 09:17:15,902 | INFO     | traces error code: 0
[2025-10-12 05:17:16] 2025-10-12 09:17:15,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:17:16] 2025-10-12 09:17:16,054 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:17:16] 2025-10-12 09:17:16,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:17:16] 2025-10-12 09:17:16,061 [wrapper] pilotpid: 3577298
[2025-10-12 05:17:16] 2025-10-12 09:17:16,064 [wrapper] Pilot exit status: 0
[2025-10-12 05:17:16] 2025-10-12 09:17:16,078 [wrapper] pandaids: 6838849863
[2025-10-12 05:17:16] 2025-10-12 09:17:16,143 [wrapper] cleanup supervisor_pilot 4017278 3577299
[2025-10-12 05:17:16] 2025-10-12 09:17:16,147 [wrapper] Test setup, not cleaning
[2025-10-12 05:17:16] 2025-10-12 09:17:16,151 [wrapper] apfmon messages muted
[2025-10-12 05:17:16] 2025-10-12 09:17:16,155 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:17:16] 2025-10-12 09:17:16,166 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:17:16]  *** Error codes and diagnostics ***
[2025-10-12 05:17:16]     "exeErrorCode": 0,
[2025-10-12 05:17:16]     "exeErrorDiag": "",
[2025-10-12 05:17:16]     "pilotErrorCode": 0,
[2025-10-12 05:17:16]     "pilotErrorDiag": "",
[2025-10-12 05:17:16]  *** Listing of results directory ***
[2025-10-12 05:17:16] total 412064
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:41 pilot3.tar.gz
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:52 queuedata.json
[2025-10-12 05:17:16] -rwx------. 1 boincer umatlas     36292 Oct 11 14:53 runpilot2-wrapper.sh
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:17:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 05:17:16] -rw-r--r--. 2 boincer umatlas 220134321 Oct 12 00:01 EVNT.46676267._002536.pool.root.1
[2025-10-12 05:17:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 05:17:16] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:01 input.tar.gz
[2025-10-12 05:17:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:01 pandaJob.out
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas    975512 Oct 12 00:02 agis_schedconf.cvmfs.json
[2025-10-12 05:17:16] drwx------. 5 boincer umatlas      4096 Oct 12 00:02 pilot3
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas      6613 Oct 12 05:10 init_data.xml
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas       531 Oct 12 05:15 boinc_task_state.xml
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas 192177771 Oct 12 05:15 HITS.46676269._063124.pool.root.1
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas      1038 Oct 12 05:16 memory_monitor_summary.json
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas   1560580 Oct 12 05:16 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas    577019 Oct 12 05:16 log.46676269._063124.job.log.tgz.1
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas      7824 Oct 12 05:16 heartbeat.json
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas        95 Oct 12 05:16 pilot_heartbeat.json
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 05:17 boinc_mmap_file
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas        28 Oct 12 05:17 wrapper_checkpoint.txt
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas      4895 Oct 12 05:17 pilotlog.txt
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas   2294280 Oct 12 05:17 log.46676269._063124.job.log.1
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas       357 Oct 12 05:17 output.list
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas       620 Oct 12 05:17 runtime_log
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas   2887680 Oct 12 05:17 result.tar.gz
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 05:17 runtime_log.err
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas       656 Oct 12 05:17 mojNDm4ttR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVKhNDmzIIXum.diag
[2025-10-12 05:17:16] -rw-r--r--. 1 boincer umatlas     21020 Oct 12 05:17 stderr.txt
[2025-10-12 05:17:16] HITS file was successfully produced:
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas 192177771 Oct 12 05:15 shared/HITS.pool.root.1
[2025-10-12 05:17:16]  *** Contents of shared directory: ***
[2025-10-12 05:17:16] total 406052
[2025-10-12 05:17:16] -rw-r--r--. 2 boincer umatlas 220134321 Oct 12 00:01 ATLAS.root_0
[2025-10-12 05:17:16] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:01 input.tar.gz
[2025-10-12 05:17:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas 192177771 Oct 12 05:15 HITS.pool.root.1
[2025-10-12 05:17:16] -rw-------. 1 boincer umatlas   2887680 Oct 12 05:17 result.tar.gz
05:17:18 (3573570): run_atlas exited; CPU time 59145.685063
05:17:18 (3573570): called boinc_finish(0)

</stderr_txt>
]]>

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