Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:31:15 (89110): wrapper (7.7.26015): starting
10:31:15 (89110): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 10:31:15] Arguments: --nthreads 12
[2025-10-12 10:31:15] Threads: 12
[2025-10-12 10:31:15] Checking for CVMFS
[2025-10-12 10:31:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:31:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:31:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:31:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:31:15] 2.13.2.0 3507 102 46928 151613 1 57 3212968 4096000 0 130560 0 177667 99.988 5442 381 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 10:31:15] CVMFS is ok
[2025-10-12 10:31:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:31:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:31:15] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 10:31:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 10:31:15] Further information can be found at the LHC@home message board.
[2025-10-12 10:31:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:31:15] Checking for apptainer binary...
[2025-10-12 10:31:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:31:15] Running /usr/bin/apptainer --version
[2025-10-12 10:31:15] apptainer version 1.4.3
[2025-10-12 10:31:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:31:15] pc2
[2025-10-12 10:31:15] apptainer works
[2025-10-12 10:31:15] Set ATHENA_PROC_NUMBER=12
[2025-10-12 10:31:15] Set ATHENA_CORE_NUMBER=12
[2025-10-12 10:31:15] Starting ATLAS job with PandaID=6837595830
[2025-10-12 10:31:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:15:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:15:31]  protocol_id=None
[2025-10-12 11:15:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 11:15:31]  replicas=None
[2025-10-12 11:15:31]  scope=mc23_13p6TeV
[2025-10-12 11:15:31]  status=None
[2025-10-12 11:15:31]  status_code=0
[2025-10-12 11:15:31]  storage_token=
[2025-10-12 11:15:31]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6837595830/log.46676269._037346.job.log.tgz.1
[2025-10-12 11:15:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/d4/log.46676269._037346.job.log.tgz.1
[2025-10-12 11:15:31]  workdir=None
[2025-10-12 11:15:31] ]
[2025-10-12 11:15:31] 2025-10-12 09:14:53,663 | INFO     | transferring file log.46676269._037346.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6837595830/log.46676269._037346.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 11:15:31] 2025-10-12 09:14:53,663 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6837595830/log.46676269._037346.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._037346.job
[2025-10-12 11:15:31] 2025-10-12 09:14:53,671 | INFO     | adding to output.list: log.46676269._037346.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/d4/log.46676269._037346.job.log.tg
[2025-10-12 11:15:31] 2025-10-12 09:14:53,672 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:15:31] 2025-10-12 09:14:53,672 | INFO     | summary of transferred files:
[2025-10-12 11:15:31] 2025-10-12 09:14:53,672 | INFO     |  -- lfn=log.46676269._037346.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:15:31] 2025-10-12 09:14:53,672 | INFO     | stage-out finished correctly
[2025-10-12 11:15:31] 2025-10-12 09:14:53,705 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:15:31] 2025-10-12 09:14:53,734 | INFO     | job 6837595830 has state=finished
[2025-10-12 11:15:31] 2025-10-12 09:14:53,734 | INFO     | preparing for final server update for job 6837595830 in state='finished'
[2025-10-12 11:15:31] 2025-10-12 09:14:53,734 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:15:31] 2025-10-12 09:14:53,734 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:15:31] 2025-10-12 09:14:53,734 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:15:31] 2025-10-12 09:14:53,734 | INFO     | job 6837595830 has finished - writing final server update
[2025-10-12 11:15:31] 2025-10-12 09:14:53,734 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:15:31] 2025-10-12 09:14:53,735 | INFO     | executing command: lscpu
[2025-10-12 11:15:31] 2025-10-12 09:14:53,743 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:15:31] 2025-10-12 09:14:54,281 | INFO     | time since job start (2615s) is within the limit (172800.0s)
[2025-10-12 11:15:31] 2025-10-12 09:14:56,287 | INFO     | time since job start (2617s) is within the limit (172800.0s)
[2025-10-12 11:15:31] 2025-10-12 09:14:57,910 | WARNING  | process 99269 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 11:15:31] 2025-10-12 09:14:57,911 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6837595830/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:15:31] 2025-10-12 09:14:57,943 | INFO     | number of running child processes to parent process 99269: 1
[2025-10-12 11:15:31] 2025-10-12 09:14:57,943 | INFO     | maximum number of monitored processes: 6
[2025-10-12 11:15:31] 2025-10-12 09:14:58,292 | INFO     | time since job start (2619s) is within the limit (172800.0s)
[2025-10-12 11:15:31] 2025-10-12 09:14:59,060 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 11:15:31] 2025-10-12 09:14:59,060 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 2847.4848333333334
[2025-10-12 11:15:31] 2025-10-12 09:14:59,061 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6837595830/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:15:31] 2025-10-12 09:14:59,061 | INFO     | extracted standard info from prmon json
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | INFO     | sum of square deviations: 14456085.0
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | INFO     | sum of deviations: 292748943.0
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | INFO     | mean x: 1760259268.5
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | INFO     | mean y: 3127000.888888889
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | INFO     | -- intersect: -35643733145.50124
[2025-10-12 11:15:31] 2025-10-12 09:14:59,062 | INFO     | intersect: -35643733145.50124
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | chi2: 0.0001657451481762144
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | -- intersect: -35643733145.50124
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | current memory leak: 20.25 B/s (using 36 data points, chi2=0.00)
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | could have reported an average CPU frequency of 3268 MHz (5 samples)
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | ..............................
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | . Timing measurements:
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | . get job = 0 s
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | . initial setup = 1 s
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | . payload setup = 2 s
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | . stage-in = 0 s
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | . payload execution = 2594 s
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | . stage-out = 0 s
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | . log creation = 0 s
[2025-10-12 11:15:31] 2025-10-12 09:14:59,063 | INFO     | ..............................
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | 
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | job summary report
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | --------------------------------------------------
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | PanDA job id: 6837595830
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | task id: 46676269
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | errors: (none)
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | pilot state: finished 
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | transexitcode: 0
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | exeerrorcode: 0
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | exeerrordiag: 
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | exitcode: 0
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | exitmsg: OK
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | cpuconsumptiontime: 27523 s
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | nevents: 400
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | neventsw: 0
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | pid: 99269
[2025-10-12 11:15:31] 2025-10-12 09:14:59,093 | INFO     | pgrp: 99269
[2025-10-12 11:15:31] 2025-10-12 09:14:59,094 | INFO     | corecount: 12
[2025-10-12 11:15:31] 2025-10-12 09:14:59,094 | INFO     | event service: False
[2025-10-12 11:15:31] 2025-10-12 09:14:59,094 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 2600: 2374388, 2602: 2383442, 2607: 2383612}
[2025-10-12 11:15:31] 2025-10-12 09:14:59,094 | INFO     | --------------------------------------------------
[2025-10-12 11:15:31] 2025-10-12 09:14:59,094 | INFO     | 
[2025-10-12 11:15:31] 2025-10-12 09:14:59,094 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | job 6837595830 has completed (purged errors)
[2025-10-12 11:15:31] 2025-10-12 09:14:59,102 | INFO     | overall cleanup function is called
[2025-10-12 11:15:31] 2025-10-12 09:14:59,354 | INFO     | PID=92836 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:15:31] 2025-10-12 09:15:00,108 | INFO     | --- collectZombieJob: --- 10, [99269]
[2025-10-12 11:15:31] 2025-10-12 09:15:00,109 | INFO     | zombie collector waiting for pid 99269
[2025-10-12 11:15:31] 2025-10-12 09:15:00,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:15:31] 2025-10-12 09:15:00,109 | INFO     | collected zombie processes
[2025-10-12 11:15:31] 2025-10-12 09:15:00,109 | INFO     | will attempt to kill all subprocesses of pid=99269
[2025-10-12 11:15:31] 2025-10-12 09:15:00,160 | INFO     | process IDs to be killed: [99269] (in reverse order)
[2025-10-12 11:15:31] 2025-10-12 09:15:00,175 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:15:31] 2025-10-12 09:15:00,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:15:31] 2025-10-12 09:15:00,176 | INFO     | did not find any defunct processes belonging to 99269
[2025-10-12 11:15:31] 2025-10-12 09:15:00,177 | INFO     | did not find any defunct processes belonging to 99269
[2025-10-12 11:15:31] 2025-10-12 09:15:00,177 | INFO     | ready for new job
[2025-10-12 11:15:31] 2025-10-12 09:15:00,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:15:31] 2025-10-12 09:15:00,178 | INFO     | ***************************************
[2025-10-12 11:15:31] 2025-10-12 09:15:00,178 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:15:31] 2025-10-12 09:15:00,178 | INFO     | ***************************************
[2025-10-12 11:15:31] 2025-10-12 09:15:00,178 | INFO     | 
[2025-10-12 11:15:31] 2025-10-12 09:15:00,178 | INFO     | architecture information:
[2025-10-12 11:15:31] 2025-10-12 09:15:00,178 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:15:31] 2025-10-12 09:15:00,184 | INFO     | cat /etc/os-release:
[2025-10-12 11:15:31] NAME="CentOS Linux"
[2025-10-12 11:15:31] VERSION="7 (Core)"
[2025-10-12 11:15:31] ID="centos"
[2025-10-12 11:15:31] ID_LIKE="rhel fedora"
[2025-10-12 11:15:31] VERSION_ID="7"
[2025-10-12 11:15:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:15:31] ANSI_COLOR="0;31"
[2025-10-12 11:15:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:15:31] HOME_URL="https://www.centos.org/"
[2025-10-12 11:15:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:15:31] 
[2025-10-12 11:15:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:15:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:15:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:15:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:15:31] 
[2025-10-12 11:15:31] 2025-10-12 09:15:00,184 | INFO     | ***************************************
[2025-10-12 11:15:31] 2025-10-12 09:15:00,687 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 11:15:31] 2025-10-12 09:15:00,701 | INFO     | sufficient remaining disk space (28694282240 B)
[2025-10-12 11:15:31] 2025-10-12 09:15:00,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:15:31] 2025-10-12 09:15:00,702 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:15:31] 2025-10-12 09:15:00,702 | INFO     | update_server=False
[2025-10-12 11:15:31] 2025-10-12 09:15:00,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:15:31] 2025-10-12 09:15:00,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:15:31] 2025-10-12 09:15:00,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:15:31] 2025-10-12 09:15:01,205 | INFO     | all payload control threads have been joined
[2025-10-12 11:15:31] 2025-10-12 09:15:01,234 | INFO     | all job control threads have been joined
[2025-10-12 11:15:31] 2025-10-12 09:15:01,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:15:31] 2025-10-12 09:15:01,452 | INFO     | aborting loop
[2025-10-12 11:15:31] 2025-10-12 09:15:01,609 | INFO     | all data control threads have been joined
[2025-10-12 11:15:31] 2025-10-12 09:15:01,704 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:01,706 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:01,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:15:31] 2025-10-12 09:15:02,052 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:02,211 | INFO     | [payload] control thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:02,235 | INFO     | [job] control thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:02,457 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:02,489 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:02,499 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:02,510 | INFO     | [job] validate thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:02,614 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:02,615 | INFO     | [data] control thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:02,683 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:03,291 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:03,720 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:04,708 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:10,944 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:15:31] 2025-10-12 09:15:11,949 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:15:31] 2025-10-12 09:15:23,795 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:15:31] 2025-10-12 09:15:24,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123727458862912)>', '<ExcThread(monitor, started 123726959978240)>']
[2025-10-12 11:15:31] 2025-10-12 09:15:29,362 | INFO     | all workflow threads have been joined
[2025-10-12 11:15:31] 2025-10-12 09:15:29,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:15:31] 2025-10-12 09:15:29,362 | INFO     | traces error code: 0
[2025-10-12 11:15:31] 2025-10-12 09:15:29,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:15:31] 2025-10-12 09:15:31,485 | INFO     | PID=92836 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:15:31] 2025-10-12 09:15:31,485 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:15:31] 2025-10-12 09:15:31,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:15:31] 2025-10-12 09:15:31,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:15:31] 2025-10-12 09:15:31,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:15:31] 2025-10-12 09:15:31,485 | INFO     | [monitor] control thread has ended
[2025-10-12 11:15:31] 2025-10-12 09:15:31,522 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:15:31] 2025-10-12 09:15:31,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:15:31] 2025-10-12 09:15:31,524 [wrapper] pilotpid: 92836
[2025-10-12 11:15:31] 2025-10-12 09:15:31,525 [wrapper] Pilot exit status: 0
[2025-10-12 11:15:31] 2025-10-12 09:15:31,528 [wrapper] pandaids: 6837595830
[2025-10-12 11:15:31] 2025-10-12 09:15:31,537 [wrapper] cleanup supervisor_pilot  109208 92837
[2025-10-12 11:15:31] 2025-10-12 09:15:31,538 [wrapper] Test setup, not cleaning
[2025-10-12 11:15:31] 2025-10-12 09:15:31,539 [wrapper] apfmon messages muted
[2025-10-12 11:15:31] 2025-10-12 09:15:31,540 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:15:31] 2025-10-12 09:15:31,541 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:15:31]  *** Error codes and diagnostics ***
[2025-10-12 11:15:31]     "exeErrorCode": 0,
[2025-10-12 11:15:31]     "exeErrorDiag": "",
[2025-10-12 11:15:31]     "pilotErrorCode": 0,
[2025-10-12 11:15:31]     "pilotErrorDiag": "",
[2025-10-12 11:15:31]  *** Listing of results directory ***
[2025-10-12 11:15:31] total 407568
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc    557409 Oct 10 12:49 pilot3.tar.gz
[2025-10-12 11:15:31] -rwx------ 1 boinc boinc     36292 Oct 10 13:02 runpilot2-wrapper.sh
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc      5112 Oct 10 13:02 queuedata.json
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:15:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:31 run_atlas
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:31 job.xml
[2025-10-12 11:15:31] -rw-r--r-- 2 boinc boinc 222098880 Oct 12 10:31 EVNT.46676267._001517.pool.root.1
[2025-10-12 11:15:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:31 start_atlas.sh
[2025-10-12 11:15:31] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:31 shared
[2025-10-12 11:15:31] -rw-r--r-- 2 boinc boinc    569676 Oct 12 10:31 input.tar.gz
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc      6562 Oct 12 10:31 init_data.xml
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:31 boinc_setup_complete
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:31 boinc_lockfile
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:31 pandaJob.out
[2025-10-12 11:15:31] -rw------- 1 boinc boinc    975520 Oct 12 10:31 agis_schedconf.cvmfs.json
[2025-10-12 11:15:31] -rw------- 1 boinc boinc   1560580 Oct 12 10:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:15:31] drwx------ 5 boinc boinc      4096 Oct 12 10:31 pilot3
[2025-10-12 11:15:31] -rw------- 1 boinc boinc 189831419 Oct 12 11:14 HITS.46676269._037346.pool.root.1
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc       529 Oct 12 11:14 boinc_task_state.xml
[2025-10-12 11:15:31] -rw------- 1 boinc boinc        95 Oct 12 11:14 pilot_heartbeat.json
[2025-10-12 11:15:31] -rw------- 1 boinc boinc      1034 Oct 12 11:14 memory_monitor_summary.json
[2025-10-12 11:15:31] -rw------- 1 boinc boinc    354119 Oct 12 11:14 log.46676269._037346.job.log.tgz.1
[2025-10-12 11:15:31] -rw------- 1 boinc boinc      7782 Oct 12 11:14 heartbeat.json
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc      8192 Oct 12 11:15 boinc_mmap_file
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc        27 Oct 12 11:15 wrapper_checkpoint.txt
[2025-10-12 11:15:31] -rw------- 1 boinc boinc       745 Oct 12 11:15 pilotlog.txt
[2025-10-12 11:15:31] -rw------- 1 boinc boinc    404999 Oct 12 11:15 log.46676269._037346.job.log.1
[2025-10-12 11:15:31] -rw------- 1 boinc boinc       357 Oct 12 11:15 output.list
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc       620 Oct 12 11:15 runtime_log
[2025-10-12 11:15:31] -rw------- 1 boinc boinc    778240 Oct 12 11:15 result.tar.gz
[2025-10-12 11:15:31] -rw------- 1 boinc boinc       639 Oct 12 11:15 vgaNDmE4PR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf9cNDmeOvGFn.diag
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc      8636 Oct 12 11:15 runtime_log.err
[2025-10-12 11:15:31] -rw-r--r-- 1 boinc boinc     21991 Oct 12 11:15 stderr.txt
[2025-10-12 11:15:31] HITS file was successfully produced:
[2025-10-12 11:15:31] -rw------- 1 boinc boinc 189831419 Oct 12 11:14 shared/HITS.pool.root.1
[2025-10-12 11:15:31]  *** Contents of shared directory: ***
[2025-10-12 11:15:31] total 403624
[2025-10-12 11:15:31] -rw-r--r-- 2 boinc boinc 222098880 Oct 12 10:31 ATLAS.root_0
[2025-10-12 11:15:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:31 start_atlas.sh
[2025-10-12 11:15:31] -rw-r--r-- 2 boinc boinc    569676 Oct 12 10:31 input.tar.gz
[2025-10-12 11:15:31] -rw------- 1 boinc boinc 189831419 Oct 12 11:14 HITS.pool.root.1
[2025-10-12 11:15:31] -rw------- 1 boinc boinc    778240 Oct 12 11:15 result.tar.gz
11:15:32 (89110): run_atlas exited; CPU time 27468.723740
11:15:32 (89110): called boinc_finish(0)

</stderr_txt>
]]>

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