Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:57:01 (25052): wrapper (7.7.26015): starting
16:57:01 (25052): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:57:01] Arguments: --nthreads 8
[2025-10-11 16:57:01] Threads: 8
[2025-10-11 16:57:01] Checking for CVMFS
[2025-10-11 16:57:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:57:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:57:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:57:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:57:01] 2.11.2.0 31396 51926 131984 151595 1 188 15918573 18432001 1833 130560 0 45792162 99.974 2219624 39277 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 16:57:01] CVMFS is ok
[2025-10-11 16:57:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:57:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:57:01] Further information can be found at the LHC@home message board.
[2025-10-11 16:57:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:57:01] Checking for apptainer binary...
[2025-10-11 16:57:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:57:01] Running /usr/bin/apptainer --version
[2025-10-11 16:57:01] apptainer version 1.3.2-1.el7
[2025-10-11 16:57:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:57:02] c-206-10.aglt2.org
[2025-10-11 16:57:02] apptainer works
[2025-10-11 16:57:02] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:57:02] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:57:02] Starting ATLAS job with PandaID=6838604559
[2025-10-11 16:57:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:09:28 (10688): wrapper (7.7.26015): starting
19:09:28 (10688): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:09:28] Arguments: --nthreads 8
[2025-10-11 19:09:28] Threads: 8
[2025-10-11 19:09:28] This job has been restarted, cleaning up previous attempt
[2025-10-11 19:09:28] Checking for CVMFS
[2025-10-11 19:09:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:09:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:09:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:09:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:09:28] 2.11.2.0 31396 52058 131096 151599 1 39 15939945 18432000 1 130560 0 45918679 99.974 2224936 39256 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 19:09:28] CVMFS is ok
[2025-10-11 19:09:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:09:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:09:28] Further information can be found at the LHC@home message board.
[2025-10-11 19:09:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:09:28] Checking for apptainer binary...
[2025-10-11 19:09:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:09:28] Running /usr/bin/apptainer --version
[2025-10-11 19:09:29] apptainer version 1.3.2-1.el7
[2025-10-11 19:09:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:09:30] c-206-10.aglt2.org
[2025-10-11 19:09:30] apptainer works
[2025-10-11 19:09:30] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:09:30] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:09:30] Starting ATLAS job with PandaID=6838604559
[2025-10-11 19:09:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:15:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:15:07] 2025-10-12 02:14:21,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:15:07] 2025-10-12 02:14:21,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:15:07] 2025-10-12 02:14:21,308 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:15:07] 2025-10-12 02:14:21,308 | INFO     | sum of square deviations: 1869302025.5
[2025-10-11 22:15:07] 2025-10-12 02:14:21,309 | INFO     | sum of deviations: 9984871650.500002
[2025-10-11 22:15:07] 2025-10-12 02:14:21,309 | INFO     | mean x: 1760229728.5
[2025-10-11 22:15:07] 2025-10-12 02:14:21,310 | INFO     | mean y: 2470328.0274725277
[2025-10-11 22:15:07] 2025-10-12 02:14:21,310 | INFO     | -- intersect: -9399791946.719612
[2025-10-11 22:15:07] 2025-10-12 02:14:21,310 | INFO     | intersect: -9399791946.719612
[2025-10-11 22:15:07] 2025-10-12 02:14:21,310 | INFO     | chi2: 2.1433692692187645
[2025-10-11 22:15:07] 2025-10-12 02:14:21,310 | INFO     | sum of square deviations: 1719429448.0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,311 | INFO     | sum of deviations: 21915216788.999996
[2025-10-11 22:15:07] 2025-10-12 02:14:21,311 | INFO     | mean x: 1760229576.0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,311 | INFO     | mean y: 2482188.084745763
[2025-10-11 22:15:07] 2025-10-12 02:14:21,311 | INFO     | -- intersect: -22432758060.545414
[2025-10-11 22:15:07] 2025-10-12 02:14:21,312 | INFO     | intersect: -22432758060.545414
[2025-10-11 22:15:07] 2025-10-12 02:14:21,312 | INFO     | chi2: 1.3257016674992481
[2025-10-11 22:15:07] 2025-10-12 02:14:21,312 | INFO     | current chi2=1.3257016674992481 (change=38.148704166946814 %)
[2025-10-11 22:15:07] 2025-10-12 02:14:21,312 | INFO     | sum of square deviations: 1577789583.0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,313 | INFO     | sum of deviations: 21324261629.499992
[2025-10-11 22:15:07] 2025-10-12 02:14:21,313 | INFO     | mean x: 1760229423.5
[2025-10-11 22:15:07] 2025-10-12 02:14:21,313 | INFO     | mean y: 2481552.4011627906
[2025-10-11 22:15:07] 2025-10-12 02:14:21,313 | INFO     | -- intersect: -23787504868.530827
[2025-10-11 22:15:07] 2025-10-12 02:14:21,313 | INFO     | intersect: -23787504868.530827
[2025-10-11 22:15:07] 2025-10-12 02:14:21,314 | INFO     | chi2: 1.3265106439354237
[2025-10-11 22:15:07] 2025-10-12 02:14:21,314 | INFO     | current chi2=1.3265106439354237 (change=-0.06102251026821397 %)
[2025-10-11 22:15:07] 2025-10-12 02:14:21,314 | INFO     | right removable region: 171
[2025-10-11 22:15:07] 2025-10-12 02:14:21,314 | INFO     | sum of square deviations: 1719429448.0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,315 | INFO     | sum of deviations: -16205820895.0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,315 | INFO     | mean x: 1760229881.0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,315 | INFO     | mean y: 2496662.2711864407
[2025-10-11 22:15:07] 2025-10-12 02:14:21,315 | INFO     | -- intersect: 16592866344.896957
[2025-10-11 22:15:07] 2025-10-12 02:14:21,315 | INFO     | intersect: 16592866344.896957
[2025-10-11 22:15:07] 2025-10-12 02:14:21,316 | INFO     | chi2: 0.8471405813697349
[2025-10-11 22:15:07] 2025-10-12 02:14:21,316 | INFO     | current chi2=0.8471405813697349 (change=60.476218748880875 %)
[2025-10-11 22:15:07] 2025-10-12 02:14:21,316 | INFO     | sum of square deviations: 1577789583.0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,317 | INFO     | sum of deviations: -17076820405.5
[2025-10-11 22:15:07] 2025-10-12 02:14:21,317 | INFO     | mean x: 1760230033.5
[2025-10-11 22:15:07] 2025-10-12 02:14:21,317 | INFO     | mean y: 2497591.75
[2025-10-11 22:15:07] 2025-10-12 02:14:21,317 | INFO     | -- intersect: 19053917678.636677
[2025-10-11 22:15:07] 2025-10-12 02:14:21,317 | INFO     | intersect: 19053917678.636677
[2025-10-11 22:15:07] 2025-10-12 02:14:21,317 | INFO     | chi2: 0.8442910344490893
[2025-10-11 22:15:07] 2025-10-12 02:14:21,317 | INFO     | current chi2=0.8442910344490893 (change=0.3363723782466237 %)
[2025-10-11 22:15:07] 2025-10-12 02:14:21,318 | INFO     | left removable region: 20
[2025-10-11 22:15:07] 2025-10-12 02:14:21,318 | INFO     | sum of square deviations: 1067554900.0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,319 | INFO     | sum of deviations: -4802720319.999999
[2025-10-11 22:15:07] 2025-10-12 02:14:21,319 | INFO     | mean x: 1760230003.0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,319 | INFO     | mean y: 2511163.8278145697
[2025-10-11 22:15:07] 2025-10-12 02:14:21,319 | INFO     | -- intersect: 7921441050.50789
[2025-10-11 22:15:07] 2025-10-12 02:14:21,319 | INFO     | intersect: 7921441050.50789
[2025-10-11 22:15:07] 2025-10-12 02:14:21,319 | INFO     | chi2: 0.004031413693897317
[2025-10-11 22:15:07] 2025-10-12 02:14:21,319 | INFO     | -- intersect: 7921441050.50789
[2025-10-11 22:15:07] 2025-10-12 02:14:21,320 | INFO     | current memory leak: -4.50 B/s (using 151 data points, chi2=0.00)
[2025-10-11 22:15:07] 2025-10-12 02:14:21,320 | INFO     | could have reported an average CPU frequency of 2282 MHz (10 samples)
[2025-10-11 22:15:07] 2025-10-12 02:14:21,320 | INFO     | ..............................
[2025-10-11 22:15:07] 2025-10-12 02:14:21,320 | INFO     | . Timing measurements:
[2025-10-11 22:15:07] 2025-10-12 02:14:21,320 | INFO     | . get job = 0 s
[2025-10-11 22:15:07] 2025-10-12 02:14:21,320 | INFO     | . initial setup = 1 s
[2025-10-11 22:15:07] 2025-10-12 02:14:21,320 | INFO     | . payload setup = 6 s
[2025-10-11 22:15:07] 2025-10-12 02:14:21,321 | INFO     | . stage-in = 0 s
[2025-10-11 22:15:07] 2025-10-12 02:14:21,321 | INFO     | . payload execution = 11048 s
[2025-10-11 22:15:07] 2025-10-12 02:14:21,321 | INFO     | . stage-out = 2 s
[2025-10-11 22:15:07] 2025-10-12 02:14:21,321 | INFO     | . log creation = 0 s
[2025-10-11 22:15:07] 2025-10-12 02:14:21,321 | INFO     | ..............................
[2025-10-11 22:15:07] 2025-10-12 02:14:21,820 | INFO     | 
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | job summary report
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | --------------------------------------------------
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | PanDA job id: 6838604559
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | task id: 46676269
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | errors: (none)
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | pilot state: finished 
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | transexitcode: 0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | exeerrorcode: 0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | exeerrordiag: 
[2025-10-11 22:15:07] 2025-10-12 02:14:21,821 | INFO     | exitcode: 0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | exitmsg: OK
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | cpuconsumptiontime: 84542 s
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | nevents: 400
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | neventsw: 0
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | pid: 9125
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | pgrp: 9125
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | corecount: 8
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | event service: False
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 11057: 2378300, 11060: 2387482, 11063: 2387620}
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | --------------------------------------------------
[2025-10-11 22:15:07] 2025-10-12 02:14:21,822 | INFO     | 
[2025-10-11 22:15:07] 2025-10-12 02:14:21,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 22:15:07] 2025-10-12 02:14:21,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:15:07] 2025-10-12 02:14:21,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:15:07] 2025-10-12 02:14:21,838 | INFO     | job 6838604559 has completed (purged errors)
[2025-10-11 22:15:07] 2025-10-12 02:14:21,838 | INFO     | overall cleanup function is called
[2025-10-11 22:15:07] 2025-10-12 02:14:22,845 | INFO     | --- collectZombieJob: --- 10, [9125]
[2025-10-11 22:15:07] 2025-10-12 02:14:22,845 | INFO     | zombie collector waiting for pid 9125
[2025-10-11 22:15:07] 2025-10-12 02:14:22,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:15:07] 2025-10-12 02:14:22,846 | INFO     | collected zombie processes
[2025-10-11 22:15:07] 2025-10-12 02:14:22,846 | INFO     | will attempt to kill all subprocesses of pid=9125
[2025-10-11 22:15:07] 2025-10-12 02:14:22,960 | INFO     | process IDs to be killed: [9125] (in reverse order)
[2025-10-11 22:15:07] 2025-10-12 02:14:22,999 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:15:07] 2025-10-12 02:14:22,999 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:15:07] 2025-10-12 02:14:23,001 | INFO     | did not find any defunct processes belonging to 9125
[2025-10-11 22:15:07] 2025-10-12 02:14:23,004 | INFO     | did not find any defunct processes belonging to 9125
[2025-10-11 22:15:07] 2025-10-12 02:14:23,004 | INFO     | ready for new job
[2025-10-11 22:15:07] 2025-10-12 02:14:23,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:15:07] 2025-10-12 02:14:23,005 | INFO     | ***************************************
[2025-10-11 22:15:07] 2025-10-12 02:14:23,006 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:15:07] 2025-10-12 02:14:23,006 | INFO     | ***************************************
[2025-10-11 22:15:07] 2025-10-12 02:14:23,006 | INFO     | 
[2025-10-11 22:15:07] 2025-10-12 02:14:23,007 | INFO     | architecture information:
[2025-10-11 22:15:07] 2025-10-12 02:14:23,007 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:15:07] 2025-10-12 02:14:23,017 | INFO     | cat /etc/os-release:
[2025-10-11 22:15:07] NAME="CentOS Linux"
[2025-10-11 22:15:07] VERSION="7 (Core)"
[2025-10-11 22:15:07] ID="centos"
[2025-10-11 22:15:07] ID_LIKE="rhel fedora"
[2025-10-11 22:15:07] VERSION_ID="7"
[2025-10-11 22:15:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:15:07] ANSI_COLOR="0;31"
[2025-10-11 22:15:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:15:07] HOME_URL="https://www.centos.org/"
[2025-10-11 22:15:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:15:07] 
[2025-10-11 22:15:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:15:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:15:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:15:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:15:07] 
[2025-10-11 22:15:07] 2025-10-12 02:14:23,017 | INFO     | ***************************************
[2025-10-11 22:15:07] 2025-10-12 02:14:23,520 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 22:15:07] 2025-10-12 02:14:23,532 | INFO     | sufficient remaining disk space (27847032832 B)
[2025-10-11 22:15:07] 2025-10-12 02:14:23,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:15:07] 2025-10-12 02:14:23,532 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:15:07] 2025-10-12 02:14:23,532 | INFO     | update_server=False
[2025-10-11 22:15:07] 2025-10-12 02:14:23,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:15:07] 2025-10-12 02:14:23,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:15:07] 2025-10-12 02:14:23,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:15:07] 2025-10-12 02:14:24,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:15:07] 2025-10-12 02:14:24,052 | INFO     | aborting loop
[2025-10-11 22:15:07] 2025-10-12 02:14:24,401 | INFO     | all data control threads have been joined
[2025-10-11 22:15:07] 2025-10-12 02:14:24,538 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:24,752 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:24,843 | INFO     | all job control threads have been joined
[2025-10-11 22:15:07] 2025-10-12 02:14:24,859 | INFO     | all payload control threads have been joined
[2025-10-11 22:15:07] 2025-10-12 02:14:25,057 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,289 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,328 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,342 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,343 | INFO     | [job] validate thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,406 | INFO     | [data] control thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,414 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,538 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,849 | INFO     | [job] control thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,865 | INFO     | [payload] control thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:25,969 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:26,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:15:07] 2025-10-12 02:14:27,419 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:27,996 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:33,738 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:15:07] 2025-10-12 02:14:34,744 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:15:07] 2025-10-12 02:14:53,381 | INFO     | PID=21750 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 22:15:07] 2025-10-12 02:14:53,381 | INFO     | .. there are 3 such processes running
[2025-10-11 22:15:07] 2025-10-12 02:14:53,382 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:15:07] 2025-10-12 02:14:53,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:15:07] 2025-10-12 02:14:53,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:15:07] 2025-10-12 02:14:59,897 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:15:07] 2025-10-12 02:15:01,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139842612848448)>', '<ExcThread(monitor, started 139841886992128)>']
[2025-10-11 22:15:07] 2025-10-12 02:15:02,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:15:07] 2025-10-12 02:15:02,412 | INFO     | [monitor] control thread has ended
[2025-10-11 22:15:07] 2025-10-12 02:15:06,920 | INFO     | all workflow threads have been joined
[2025-10-11 22:15:07] 2025-10-12 02:15:06,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:15:07] 2025-10-12 02:15:06,920 | INFO     | traces error code: 0
[2025-10-11 22:15:07] 2025-10-12 02:15:06,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:15:07] 2025-10-12 02:15:07,009 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:15:07] 2025-10-12 02:15:07,011 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:15:07] 2025-10-12 02:15:07,013 [wrapper] pilotpid: 21750
[2025-10-11 22:15:07] 2025-10-12 02:15:07,015 [wrapper] Pilot exit status: 0
[2025-10-11 22:15:07] 2025-10-12 02:15:07,022 [wrapper] pandaids: 6838604559 6838604559
[2025-10-11 22:15:07] 2025-10-12 02:15:07,046 [wrapper] cleanup supervisor_pilot 18114 21751
[2025-10-11 22:15:07] 2025-10-12 02:15:07,048 [wrapper] Test setup, not cleaning
[2025-10-11 22:15:07] 2025-10-12 02:15:07,050 [wrapper] apfmon messages muted
[2025-10-11 22:15:07] 2025-10-12 02:15:07,052 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:15:07] 2025-10-12 02:15:07,054 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:15:07]  *** Error codes and diagnostics ***
[2025-10-11 22:15:07]     "exeErrorCode": 0,
[2025-10-11 22:15:07]     "exeErrorDiag": "",
[2025-10-11 22:15:07]     "pilotErrorCode": 0,
[2025-10-11 22:15:07]     "pilotErrorDiag": "",
[2025-10-11 22:15:07]  *** Listing of results directory ***
[2025-10-11 22:15:07] total 629188
[2025-10-11 22:15:07] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 11:50 pilot3.tar.gz
[2025-10-11 22:15:07] -rwx------ 1 boincer umatlas     36292 Oct 11 11:53 runpilot2-wrapper.sh
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 11:53 queuedata.json
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas       100 Oct 11 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:15:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 16:57 run_atlas
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas       105 Oct 11 16:57 job.xml
[2025-10-11 22:15:07] -rw-r--r-- 3 boincer umatlas 220785360 Oct 11 16:57 EVNT.46676267._002423.pool.root.1
[2025-10-11 22:15:07] -rw-r--r-- 3 boincer umatlas 220785360 Oct 11 16:57 ATLAS.root_0
[2025-10-11 22:15:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:57 start_atlas.sh
[2025-10-11 22:15:07] drwxrwx--x 2 boincer umatlas      4096 Oct 11 16:57 shared
[2025-10-11 22:15:07] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 16:57 input.tar.gz
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas         0 Oct 11 16:57 boinc_lockfile
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 19:09 pandaJob.out
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas    975520 Oct 11 19:09 agis_schedconf.cvmfs.json
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas      5953 Oct 11 22:10 init_data.xml
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas       531 Oct 11 22:13 boinc_task_state.xml
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas 194875437 Oct 11 22:13 HITS.46676269._060334.pool.root.1
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas      1051 Oct 11 22:14 memory_monitor_summary.json
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas   1560580 Oct 11 22:14 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas    416274 Oct 11 22:14 log.46676269._060334.job.log.tgz.1
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas      7869 Oct 11 22:14 heartbeat.json
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas        96 Oct 11 22:14 pilot_heartbeat.json
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 22:15 boinc_mmap_file
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas        29 Oct 11 22:15 wrapper_checkpoint.txt
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas      4893 Oct 11 22:15 pilotlog.txt
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas   1553188 Oct 11 22:15 log.46676269._060334.job.log.1
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas       357 Oct 11 22:15 output.list
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas       620 Oct 11 22:15 runtime_log
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas   1986560 Oct 11 22:15 result.tar.gz
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas      8789 Oct 11 22:15 runtime_log.err
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas       787 Oct 11 22:15 EoHKDmN5qR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVBSMDmdabP6n.diag
[2025-10-11 22:15:07] -rw-r--r-- 1 boincer umatlas     23002 Oct 11 22:15 stderr.txt
[2025-10-11 22:15:07] HITS file was successfully produced:
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas 194875437 Oct 11 22:13 shared/HITS.pool.root.1
[2025-10-11 22:15:07]  *** Contents of shared directory: ***
[2025-10-11 22:15:07] total 408444
[2025-10-11 22:15:07] -rw-r--r-- 3 boincer umatlas 220785360 Oct 11 16:57 ATLAS.root_0
[2025-10-11 22:15:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:57 start_atlas.sh
[2025-10-11 22:15:07] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 16:57 input.tar.gz
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas 194875437 Oct 11 22:13 HITS.pool.root.1
[2025-10-11 22:15:07] -rw------- 1 boincer umatlas   1986560 Oct 11 22:15 result.tar.gz
22:15:08 (10688): run_atlas exited; CPU time 84673.534938
22:15:08 (10688): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN