Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:47 (21106): wrapper (7.7.26015): starting
17:04:47 (21106): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:04:47] Arguments: --nthreads 8
[2025-10-11 17:04:47] Threads: 8
[2025-10-11 17:04:47] Checking for CVMFS
[2025-10-11 17:04:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:04:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:04:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:04:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:04:47] 2.11.2.0 2777 221958 120376 151595 3 59 14901266 20275200 1 130560 2 77292153 99.974 14186893 12096 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:04:47] CVMFS is ok
[2025-10-11 17:04:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:04:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:04:47] Further information can be found at the LHC@home message board.
[2025-10-11 17:04:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:04:47] Checking for apptainer binary...
[2025-10-11 17:04:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:04:47] Running /usr/bin/apptainer --version
[2025-10-11 17:04:47] apptainer version 1.3.2-1.el7
[2025-10-11 17:04:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:04:49] c-204-9.aglt2.org
[2025-10-11 17:04:49] apptainer works
[2025-10-11 17:04:49] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:04:49] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:04:49] Starting ATLAS job with PandaID=6838632248
[2025-10-11 17:04:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:14:07 (2930): wrapper (7.7.26015): starting
17:14:07 (2930): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:14:07] Arguments: --nthreads 8
[2025-10-11 17:14:07] Threads: 8
[2025-10-11 17:14:07] This job has been restarted, cleaning up previous attempt
[2025-10-11 17:14:07] Checking for CVMFS
[2025-10-11 17:14:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:14:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:14:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:14:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:14:08] 2.11.2.0 2860 0 28648 151597 3 1 14913773 20275200 1 130560 0 3 66.667 1291 21516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:14:08] CVMFS is ok
[2025-10-11 17:14:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:14:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:14:08] Further information can be found at the LHC@home message board.
[2025-10-11 17:14:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:14:08] Checking for apptainer binary...
[2025-10-11 17:14:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:14:08] Running /usr/bin/apptainer --version
[2025-10-11 17:14:09] apptainer version 1.3.2-1.el7
[2025-10-11 17:14:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:14:12] c-204-9.aglt2.org
[2025-10-11 17:14:12] apptainer works
[2025-10-11 17:14:12] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:14:12] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:14:12] Starting ATLAS job with PandaID=6838632248
[2025-10-11 17:14:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:12:50]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:12:50] 2025-10-11 23:12:03,741 | INFO     | time since job start (7051s) is within the limit (172800.0s)
[2025-10-11 19:12:50] 2025-10-11 23:12:04,080 | INFO     | monitor loop #524: job 0:6838632248 is in state 'finished'
[2025-10-11 19:12:50] 2025-10-11 23:12:04,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,747 | INFO     | time since job start (7053s) is within the limit (172800.0s)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,770 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 19:12:50] 2025-10-11 23:12:05,773 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-11 19:12:50] 2025-10-11 23:12:05,775 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838632248/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,776 | INFO     | extracted standard info from prmon json
[2025-10-11 19:12:50] 2025-10-11 23:12:05,776 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:12:50] 2025-10-11 23:12:05,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:12:50] 2025-10-11 23:12:05,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:12:50] 2025-10-11 23:12:05,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:12:50] 2025-10-11 23:12:05,780 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:12:50] 2025-10-11 23:12:05,780 | INFO     | sum of square deviations: 471562330.0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,781 | INFO     | sum of deviations: -1784654978.9999993
[2025-10-11 19:12:50] 2025-10-11 23:12:05,781 | INFO     | mean x: 1760220781.0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,781 | INFO     | mean y: 2610070.139130435
[2025-10-11 19:12:50] 2025-10-11 23:12:05,782 | INFO     | -- intersect: 6664267673.177349
[2025-10-11 19:12:50] 2025-10-11 23:12:05,782 | INFO     | intersect: 6664267673.177349
[2025-10-11 19:12:50] 2025-10-11 23:12:05,782 | INFO     | chi2: 1.7510767107720246
[2025-10-11 19:12:50] 2025-10-11 23:12:05,782 | INFO     | sum of square deviations: 412686807.5
[2025-10-11 19:12:50] 2025-10-11 23:12:05,783 | INFO     | sum of deviations: -693046284.5000007
[2025-10-11 19:12:50] 2025-10-11 23:12:05,783 | INFO     | mean x: 1760220628.5
[2025-10-11 19:12:50] 2025-10-11 23:12:05,783 | INFO     | mean y: 2612899.481818182
[2025-10-11 19:12:50] 2025-10-11 23:12:05,783 | INFO     | -- intersect: 2958642373.4363036
[2025-10-11 19:12:50] 2025-10-11 23:12:05,784 | INFO     | intersect: 2958642373.4363036
[2025-10-11 19:12:50] 2025-10-11 23:12:05,784 | INFO     | chi2: 1.7541680864048397
[2025-10-11 19:12:50] 2025-10-11 23:12:05,784 | INFO     | current chi2=1.7541680864048397 (change=-0.17654141670652948 %)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,784 | INFO     | right removable region: 109
[2025-10-11 19:12:50] 2025-10-11 23:12:05,784 | INFO     | sum of square deviations: 412686807.5
[2025-10-11 19:12:50] 2025-10-11 23:12:05,785 | INFO     | sum of deviations: -21124400040.000004
[2025-10-11 19:12:50] 2025-10-11 23:12:05,785 | INFO     | mean x: 1760220933.5
[2025-10-11 19:12:50] 2025-10-11 23:12:05,785 | INFO     | mean y: 2659241.4909090907
[2025-10-11 19:12:50] 2025-10-11 23:12:05,785 | INFO     | -- intersect: 90103943029.28499
[2025-10-11 19:12:50] 2025-10-11 23:12:05,785 | INFO     | intersect: 90103943029.28499
[2025-10-11 19:12:50] 2025-10-11 23:12:05,786 | INFO     | chi2: 0.1058957009835346
[2025-10-11 19:12:50] 2025-10-11 23:12:05,786 | INFO     | current chi2=0.1058957009835346 (change=93.95253786815275 %)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,786 | INFO     | sum of square deviations: 358927660.0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,786 | INFO     | sum of deviations: -20777016995.99999
[2025-10-11 19:12:50] 2025-10-11 23:12:05,787 | INFO     | mean x: 1760221086.0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,787 | INFO     | mean y: 2658134.419047619
[2025-10-11 19:12:50] 2025-10-11 23:12:05,787 | INFO     | -- intersect: 101895455754.25018
[2025-10-11 19:12:50] 2025-10-11 23:12:05,787 | INFO     | intersect: 101895455754.25018
[2025-10-11 19:12:50] 2025-10-11 23:12:05,787 | INFO     | chi2: 0.08012130789914189
[2025-10-11 19:12:50] 2025-10-11 23:12:05,787 | INFO     | current chi2=0.08012130789914189 (change=24.339414013039388 %)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,787 | INFO     | left removable region: 20
[2025-10-11 19:12:50] 2025-10-11 23:12:05,788 | INFO     | sum of square deviations: 218571540.0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,788 | INFO     | sum of deviations: -15061634440.0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,788 | INFO     | mean x: 1760221208.0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,788 | INFO     | mean y: 2651382.258426966
[2025-10-11 19:12:50] 2025-10-11 23:12:05,788 | INFO     | -- intersect: 121298444825.59145
[2025-10-11 19:12:50] 2025-10-11 23:12:05,789 | INFO     | intersect: 121298444825.59145
[2025-10-11 19:12:50] 2025-10-11 23:12:05,789 | INFO     | chi2: 0.07040727428425471
[2025-10-11 19:12:50] 2025-10-11 23:12:05,789 | INFO     | -- intersect: 121298444825.59145
[2025-10-11 19:12:50] 2025-10-11 23:12:05,789 | INFO     | current memory leak: -68.91 B/s (using 89 data points, chi2=0.07)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,789 | INFO     | could have reported an average CPU frequency of 1986 MHz (7 samples)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,790 | INFO     | ..............................
[2025-10-11 19:12:50] 2025-10-11 23:12:05,790 | INFO     | . Timing measurements:
[2025-10-11 19:12:50] 2025-10-11 23:12:05,790 | INFO     | . get job = 0 s
[2025-10-11 19:12:50] 2025-10-11 23:12:05,790 | INFO     | . initial setup = 1 s
[2025-10-11 19:12:50] 2025-10-11 23:12:05,790 | INFO     | . payload setup = 9 s
[2025-10-11 19:12:50] 2025-10-11 23:12:05,790 | INFO     | . stage-in = 0 s
[2025-10-11 19:12:50] 2025-10-11 23:12:05,790 | INFO     | . payload execution = 7011 s
[2025-10-11 19:12:50] 2025-10-11 23:12:05,790 | INFO     | . stage-out = 0 s
[2025-10-11 19:12:50] 2025-10-11 23:12:05,790 | INFO     | . log creation = 0 s
[2025-10-11 19:12:50] 2025-10-11 23:12:05,791 | INFO     | ..............................
[2025-10-11 19:12:50] 2025-10-11 23:12:05,885 | INFO     | 
[2025-10-11 19:12:50] 2025-10-11 23:12:05,885 | INFO     | job summary report
[2025-10-11 19:12:50] 2025-10-11 23:12:05,885 | INFO     | --------------------------------------------------
[2025-10-11 19:12:50] 2025-10-11 23:12:05,885 | INFO     | PanDA job id: 6838632248
[2025-10-11 19:12:50] 2025-10-11 23:12:05,885 | INFO     | task id: 46676269
[2025-10-11 19:12:50] 2025-10-11 23:12:05,886 | INFO     | errors: (none)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:12:50] 2025-10-11 23:12:05,886 | INFO     | pilot state: finished 
[2025-10-11 19:12:50] 2025-10-11 23:12:05,886 | INFO     | transexitcode: 0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,886 | INFO     | exeerrorcode: 0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,886 | INFO     | exeerrordiag: 
[2025-10-11 19:12:50] 2025-10-11 23:12:05,886 | INFO     | exitcode: 0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,886 | INFO     | exitmsg: OK
[2025-10-11 19:12:50] 2025-10-11 23:12:05,886 | INFO     | cpuconsumptiontime: 52046 s
[2025-10-11 19:12:50] 2025-10-11 23:12:05,887 | INFO     | nevents: 400
[2025-10-11 19:12:50] 2025-10-11 23:12:05,887 | INFO     | neventsw: 0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,887 | INFO     | pid: 14785
[2025-10-11 19:12:50] 2025-10-11 23:12:05,887 | INFO     | pgrp: 14785
[2025-10-11 19:12:50] 2025-10-11 23:12:05,887 | INFO     | corecount: 8
[2025-10-11 19:12:50] 2025-10-11 23:12:05,887 | INFO     | event service: False
[2025-10-11 19:12:50] 2025-10-11 23:12:05,887 | INFO     | sizes: {0: 2348685, 1: 2348884, 7: 2349146, 11: 2349174, 7024: 2376350, 7025: 2376349, 7026: 2385587, 7036: 2385725}
[2025-10-11 19:12:50] 2025-10-11 23:12:05,887 | INFO     | --------------------------------------------------
[2025-10-11 19:12:50] 2025-10-11 23:12:05,888 | INFO     | 
[2025-10-11 19:12:50] 2025-10-11 23:12:05,888 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 19:12:50] 2025-10-11 23:12:05,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,915 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,915 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,917 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,918 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:12:50] 2025-10-11 23:12:05,919 | INFO     | job 6838632248 has completed (purged errors)
[2025-10-11 19:12:50] 2025-10-11 23:12:05,919 | INFO     | overall cleanup function is called
[2025-10-11 19:12:50] 2025-10-11 23:12:06,927 | INFO     | --- collectZombieJob: --- 10, [14785]
[2025-10-11 19:12:50] 2025-10-11 23:12:06,928 | INFO     | zombie collector waiting for pid 14785
[2025-10-11 19:12:50] 2025-10-11 23:12:06,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:12:50] 2025-10-11 23:12:06,928 | INFO     | collected zombie processes
[2025-10-11 19:12:50] 2025-10-11 23:12:06,928 | INFO     | will attempt to kill all subprocesses of pid=14785
[2025-10-11 19:12:50] 2025-10-11 23:12:07,023 | INFO     | process IDs to be killed: [14785] (in reverse order)
[2025-10-11 19:12:50] 2025-10-11 23:12:07,079 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:12:50] 2025-10-11 23:12:07,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:12:50] 2025-10-11 23:12:07,082 | INFO     | did not find any defunct processes belonging to 14785
[2025-10-11 19:12:50] 2025-10-11 23:12:07,085 | INFO     | did not find any defunct processes belonging to 14785
[2025-10-11 19:12:50] 2025-10-11 23:12:07,085 | INFO     | ready for new job
[2025-10-11 19:12:50] 2025-10-11 23:12:07,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:12:50] 2025-10-11 23:12:07,087 | INFO     | ***************************************
[2025-10-11 19:12:50] 2025-10-11 23:12:07,087 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:12:50] 2025-10-11 23:12:07,087 | INFO     | ***************************************
[2025-10-11 19:12:50] 2025-10-11 23:12:07,087 | INFO     | 
[2025-10-11 19:12:50] 2025-10-11 23:12:07,088 | INFO     | architecture information:
[2025-10-11 19:12:50] 2025-10-11 23:12:07,088 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:12:50] 2025-10-11 23:12:07,106 | INFO     | cat /etc/os-release:
[2025-10-11 19:12:50] NAME="CentOS Linux"
[2025-10-11 19:12:50] VERSION="7 (Core)"
[2025-10-11 19:12:50] ID="centos"
[2025-10-11 19:12:50] ID_LIKE="rhel fedora"
[2025-10-11 19:12:50] VERSION_ID="7"
[2025-10-11 19:12:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:12:50] ANSI_COLOR="0;31"
[2025-10-11 19:12:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:12:50] HOME_URL="https://www.centos.org/"
[2025-10-11 19:12:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:12:50] 
[2025-10-11 19:12:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:12:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:12:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:12:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:12:50] 
[2025-10-11 19:12:50] 2025-10-11 23:12:07,107 | INFO     | ***************************************
[2025-10-11 19:12:50] 2025-10-11 23:12:07,610 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 19:12:50] 2025-10-11 23:12:07,629 | INFO     | sufficient remaining disk space (18589155328 B)
[2025-10-11 19:12:50] 2025-10-11 23:12:07,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:12:50] 2025-10-11 23:12:07,630 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:12:50] 2025-10-11 23:12:07,630 | INFO     | update_server=False
[2025-10-11 19:12:50] 2025-10-11 23:12:07,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:12:50] 2025-10-11 23:12:07,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:12:50] 2025-10-11 23:12:07,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:12:50] 2025-10-11 23:12:07,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:12:50] 2025-10-11 23:12:07,632 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 19:12:50] 2025-10-11 23:12:07,633 | INFO     | aborting loop
[2025-10-11 19:12:50] 2025-10-11 23:12:07,633 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:12:50] 2025-10-11 23:12:07,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:12:50] 2025-10-11 23:12:07,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:12:50] 2025-10-11 23:12:07,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:12:50] 2025-10-11 23:12:07,847 | INFO     | all payload control threads have been joined
[2025-10-11 19:12:50] 2025-10-11 23:12:07,896 | INFO     | all job control threads have been joined
[2025-10-11 19:12:50] 2025-10-11 23:12:08,052 | INFO     | all data control threads have been joined
[2025-10-11 19:12:50] 2025-10-11 23:12:08,635 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:08,636 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:08,639 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:08,735 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:08,853 | INFO     | [payload] control thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:08,901 | INFO     | [job] control thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:08,908 | INFO     | [job] validate thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:08,932 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:09,053 | INFO     | [data] control thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:09,177 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:09,189 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:09,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:09,638 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:09,935 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:10,199 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:11,638 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:12:50] 2025-10-11 23:12:43,736 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:12:50] 2025-10-11 23:12:45,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976696796992)>', '<ExcThread(monitor, started 139975534311168)>']
[2025-10-11 19:12:50] 2025-10-11 23:12:45,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:12:50] 2025-10-11 23:12:45,823 | INFO     | [monitor] control thread has ended
[2025-10-11 19:12:50] 2025-10-11 23:12:50,568 | INFO     | all workflow threads have been joined
[2025-10-11 19:12:50] 2025-10-11 23:12:50,568 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:12:50] 2025-10-11 23:12:50,568 | INFO     | traces error code: 0
[2025-10-11 19:12:50] 2025-10-11 23:12:50,569 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:12:50] 2025-10-11 23:12:50,675 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:12:50] 2025-10-11 23:12:50,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:12:50] 2025-10-11 23:12:50,684 [wrapper] pilotpid: 8358
[2025-10-11 19:12:50] 2025-10-11 23:12:50,688 [wrapper] Pilot exit status: 0
[2025-10-11 19:12:50] 2025-10-11 23:12:50,723 [wrapper] pandaids: 6838632248 6838632248
[2025-10-11 19:12:50] 2025-10-11 23:12:50,772 [wrapper] cleanup supervisor_pilot  1633 8359
[2025-10-11 19:12:50] 2025-10-11 23:12:50,776 [wrapper] Test setup, not cleaning
[2025-10-11 19:12:50] 2025-10-11 23:12:50,781 [wrapper] apfmon messages muted
[2025-10-11 19:12:50] 2025-10-11 23:12:50,786 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:12:50] 2025-10-11 23:12:50,791 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:12:50]  *** Error codes and diagnostics ***
[2025-10-11 19:12:50]     "exeErrorCode": 0,
[2025-10-11 19:12:50]     "exeErrorDiag": "",
[2025-10-11 19:12:50]     "pilotErrorCode": 0,
[2025-10-11 19:12:50]     "pilotErrorDiag": "",
[2025-10-11 19:12:50]  *** Listing of results directory ***
[2025-10-11 19:12:50] total 628516
[2025-10-11 19:12:50] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 11:50 pilot3.tar.gz
[2025-10-11 19:12:50] -rwx------ 1 boincer umatlas     36292 Oct 11 12:18 runpilot2-wrapper.sh
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 12:18 queuedata.json
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas       100 Oct 11 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:12:50] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 17:04 run_atlas
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas       105 Oct 11 17:04 job.xml
[2025-10-11 19:12:50] -rw-r--r-- 3 boincer umatlas 221432572 Oct 11 17:04 EVNT.46676267._002441.pool.root.1
[2025-10-11 19:12:50] -rw-r--r-- 3 boincer umatlas 221432572 Oct 11 17:04 ATLAS.root_0
[2025-10-11 19:12:50] drwxrwx--x 2 boincer umatlas      4096 Oct 11 17:04 shared
[2025-10-11 19:12:50] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 17:04 input.tar.gz
[2025-10-11 19:12:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:04 start_atlas.sh
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas         0 Oct 11 17:04 boinc_lockfile
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas   1560580 Oct 11 17:05 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 17:14 pandaJob.out
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas    975528 Oct 11 17:14 agis_schedconf.cvmfs.json
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas      5908 Oct 11 19:09 init_data.xml
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas        96 Oct 11 19:11 pilot_heartbeat.json
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas 194142273 Oct 11 19:11 HITS.46676269._060778.pool.root.1
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas       530 Oct 11 19:11 boinc_task_state.xml
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas      1064 Oct 11 19:11 memory_monitor_summary.json
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas    351517 Oct 11 19:11 log.46676269._060778.job.log.tgz.1
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas      7854 Oct 11 19:12 heartbeat.json
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 19:12 boinc_mmap_file
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas        27 Oct 11 19:12 wrapper_checkpoint.txt
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas      4552 Oct 11 19:12 pilotlog.txt
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas    993556 Oct 11 19:12 log.46676269._060778.job.log.1
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas       357 Oct 11 19:12 output.list
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas       620 Oct 11 19:12 runtime_log
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas   1361920 Oct 11 19:12 result.tar.gz
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas      8783 Oct 11 19:12 runtime_log.err
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas       782 Oct 11 19:12 9xuNDmeTrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSugNDmjCdMGn.diag
[2025-10-11 19:12:50] -rw-r--r-- 1 boincer umatlas     23168 Oct 11 19:12 stderr.txt
[2025-10-11 19:12:50] HITS file was successfully produced:
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas 194142273 Oct 11 19:11 shared/HITS.pool.root.1
[2025-10-11 19:12:50]  *** Contents of shared directory: ***
[2025-10-11 19:12:50] total 407752
[2025-10-11 19:12:50] -rw-r--r-- 3 boincer umatlas 221432572 Oct 11 17:04 ATLAS.root_0
[2025-10-11 19:12:50] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 17:04 input.tar.gz
[2025-10-11 19:12:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:04 start_atlas.sh
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas 194142273 Oct 11 19:11 HITS.pool.root.1
[2025-10-11 19:12:50] -rw------- 1 boincer umatlas   1361920 Oct 11 19:12 result.tar.gz
19:12:52 (2930): run_atlas exited; CPU time 52002.677042
19:12:52 (2930): called boinc_finish(0)

</stderr_txt>
]]>

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