Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:01:30 (1560): wrapper (7.7.26015): starting
17:01:30 (1560): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:01:30] Arguments: --nthreads 8
[2025-10-11 17:01:30] Threads: 8
[2025-10-11 17:01:30] Checking for CVMFS
[2025-10-11 17:01:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:01:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:01:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:01:31] 2.11.2.0 2856 78992 78760 151595 2 59 13867013 20275200 1 130560 0 35988513 99.988 2483005 39969 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:01:31] CVMFS is ok
[2025-10-11 17:01:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:01:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:01:31] Further information can be found at the LHC@home message board.
[2025-10-11 17:01:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:01:31] Checking for apptainer binary...
[2025-10-11 17:01:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:01:31] Running /usr/bin/apptainer --version
[2025-10-11 17:01:31] apptainer version 1.3.2-1.el7
[2025-10-11 17:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:01:32] c-115-6.aglt2.org
[2025-10-11 17:01:32] apptainer works
[2025-10-11 17:01:32] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:01:32] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:01:32] Starting ATLAS job with PandaID=6838632292
[2025-10-11 17:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:49:46 (15064): wrapper (7.7.26015): starting
17:49:46 (15064): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:49:46] Arguments: --nthreads 8
[2025-10-11 17:49:46] Threads: 8
[2025-10-11 17:49:46] This job has been restarted, cleaning up previous attempt
[2025-10-11 17:49:46] Checking for CVMFS
[2025-10-11 17:49:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:49:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:49:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:49:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:49:46] 2.11.2.0 2856 79040 83156 151597 2 18 13918597 20275201 1 130560 0 36054623 99.988 2485788 39956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:49:46] CVMFS is ok
[2025-10-11 17:49:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:49:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:49:46] Further information can be found at the LHC@home message board.
[2025-10-11 17:49:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:49:46] Checking for apptainer binary...
[2025-10-11 17:49:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:49:46] Running /usr/bin/apptainer --version
[2025-10-11 17:49:46] apptainer version 1.3.2-1.el7
[2025-10-11 17:49:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:49:48] c-115-6.aglt2.org
[2025-10-11 17:49:48] apptainer works
[2025-10-11 17:49:48] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:49:48] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:49:48] Starting ATLAS job with PandaID=6838632292
[2025-10-11 17:49:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:33:26]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:33:26] 2025-10-11 23:32:52,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,394 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 19:33:26] 2025-10-11 23:32:53,398 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-10-11 19:33:26] 2025-10-11 23:32:53,400 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838632292/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,401 | INFO     | extracted standard info from prmon json
[2025-10-11 19:33:26] 2025-10-11 23:32:53,401 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:33:26] 2025-10-11 23:32:53,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:33:26] 2025-10-11 23:32:53,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:33:26] 2025-10-11 23:32:53,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:33:26] 2025-10-11 23:32:53,404 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:33:26] 2025-10-11 23:32:53,404 | INFO     | sum of square deviations: 319447850.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,405 | INFO     | sum of deviations: 7621195003.000001
[2025-10-11 19:33:26] 2025-10-11 23:32:53,405 | INFO     | mean x: 1760222485.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,405 | INFO     | mean y: 2507741.891089109
[2025-10-11 19:33:26] 2025-10-11 23:32:53,405 | INFO     | -- intersect: -41991823435.6399
[2025-10-11 19:33:26] 2025-10-11 23:32:53,405 | INFO     | intersect: -41991823435.6399
[2025-10-11 19:33:26] 2025-10-11 23:32:53,406 | INFO     | chi2: 1.4546369122871177
[2025-10-11 19:33:26] 2025-10-11 23:32:53,406 | INFO     | sum of square deviations: 274312120.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,406 | INFO     | sum of deviations: 7217265416.5
[2025-10-11 19:33:26] 2025-10-11 23:32:53,406 | INFO     | mean x: 1760222332.5
[2025-10-11 19:33:26] 2025-10-11 23:32:53,407 | INFO     | mean y: 2506377.53125
[2025-10-11 19:33:26] 2025-10-11 23:32:53,407 | INFO     | -- intersect: -46309671756.27929
[2025-10-11 19:33:26] 2025-10-11 23:32:53,407 | INFO     | intersect: -46309671756.27929
[2025-10-11 19:33:26] 2025-10-11 23:32:53,407 | INFO     | chi2: 1.4579590242284544
[2025-10-11 19:33:26] 2025-10-11 23:32:53,407 | INFO     | current chi2=1.4579590242284544 (change=-0.22838083601999024 %)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,407 | INFO     | right removable region: 95
[2025-10-11 19:33:26] 2025-10-11 23:32:53,408 | INFO     | sum of square deviations: 274312120.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,408 | INFO     | sum of deviations: -6414930861.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,408 | INFO     | mean x: 1760222637.5
[2025-10-11 19:33:26] 2025-10-11 23:32:53,408 | INFO     | mean y: 2554013.6666666665
[2025-10-11 19:33:26] 2025-10-11 23:32:53,408 | INFO     | -- intersect: 41166271167.43138
[2025-10-11 19:33:26] 2025-10-11 23:32:53,408 | INFO     | intersect: 41166271167.43138
[2025-10-11 19:33:26] 2025-10-11 23:32:53,409 | INFO     | chi2: 0.08288905655426086
[2025-10-11 19:33:26] 2025-10-11 23:32:53,409 | INFO     | current chi2=0.08288905655426086 (change=94.30173565278673 %)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,409 | INFO     | sum of square deviations: 233641590.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,409 | INFO     | sum of deviations: -4498721025.000001
[2025-10-11 19:33:26] 2025-10-11 23:32:53,410 | INFO     | mean x: 1760222790.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,410 | INFO     | mean y: 2546660.758241758
[2025-10-11 19:33:26] 2025-10-11 23:32:53,410 | INFO     | -- intersect: 33895276435.69755
[2025-10-11 19:33:26] 2025-10-11 23:32:53,410 | INFO     | intersect: 33895276435.69755
[2025-10-11 19:33:26] 2025-10-11 23:32:53,410 | INFO     | chi2: 0.06710753360097446
[2025-10-11 19:33:26] 2025-10-11 23:32:53,410 | INFO     | current chi2=0.06710753360097446 (change=19.03933234293178 %)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,410 | INFO     | left removable region: 20
[2025-10-11 19:33:26] 2025-10-11 23:32:53,410 | INFO     | sum of square deviations: 130793150.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,411 | INFO     | sum of deviations: 688017292.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,411 | INFO     | mean x: 1760222912.0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,411 | INFO     | mean y: 2522731.3466666667
[2025-10-11 19:33:26] 2025-10-11 23:32:53,411 | INFO     | -- intersect: -9256859745.721851
[2025-10-11 19:33:26] 2025-10-11 23:32:53,411 | INFO     | intersect: -9256859745.721851
[2025-10-11 19:33:26] 2025-10-11 23:32:53,412 | INFO     | chi2: 8.989120711651553e-05
[2025-10-11 19:33:26] 2025-10-11 23:32:53,412 | INFO     | -- intersect: -9256859745.721851
[2025-10-11 19:33:26] 2025-10-11 23:32:53,412 | INFO     | current memory leak: 5.26 B/s (using 75 data points, chi2=0.00)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,412 | INFO     | could have reported an average CPU frequency of 2073 MHz (7 samples)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,412 | INFO     | ..............................
[2025-10-11 19:33:26] 2025-10-11 23:32:53,412 | INFO     | . Timing measurements:
[2025-10-11 19:33:26] 2025-10-11 23:32:53,413 | INFO     | . get job = 0 s
[2025-10-11 19:33:26] 2025-10-11 23:32:53,413 | INFO     | . initial setup = 1 s
[2025-10-11 19:33:26] 2025-10-11 23:32:53,413 | INFO     | . payload setup = 8 s
[2025-10-11 19:33:26] 2025-10-11 23:32:53,413 | INFO     | . stage-in = 0 s
[2025-10-11 19:33:26] 2025-10-11 23:32:53,413 | INFO     | . payload execution = 6131 s
[2025-10-11 19:33:26] 2025-10-11 23:32:53,413 | INFO     | . stage-out = 0 s
[2025-10-11 19:33:26] 2025-10-11 23:32:53,413 | INFO     | . log creation = 0 s
[2025-10-11 19:33:26] 2025-10-11 23:32:53,413 | INFO     | ..............................
[2025-10-11 19:33:26] 2025-10-11 23:32:53,496 | INFO     | 
[2025-10-11 19:33:26] 2025-10-11 23:32:53,496 | INFO     | job summary report
[2025-10-11 19:33:26] 2025-10-11 23:32:53,496 | INFO     | --------------------------------------------------
[2025-10-11 19:33:26] 2025-10-11 23:32:53,496 | INFO     | PanDA job id: 6838632292
[2025-10-11 19:33:26] 2025-10-11 23:32:53,496 | INFO     | task id: 46676269
[2025-10-11 19:33:26] 2025-10-11 23:32:53,497 | INFO     | errors: (none)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,497 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:33:26] 2025-10-11 23:32:53,497 | INFO     | pilot state: finished 
[2025-10-11 19:33:26] 2025-10-11 23:32:53,497 | INFO     | transexitcode: 0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,497 | INFO     | exeerrorcode: 0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,498 | INFO     | exeerrordiag: 
[2025-10-11 19:33:26] 2025-10-11 23:32:53,498 | INFO     | exitcode: 0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,498 | INFO     | exitmsg: OK
[2025-10-11 19:33:26] 2025-10-11 23:32:53,498 | INFO     | cpuconsumptiontime: 45899 s
[2025-10-11 19:33:26] 2025-10-11 23:32:53,498 | INFO     | nevents: 400
[2025-10-11 19:33:26] 2025-10-11 23:32:53,498 | INFO     | neventsw: 0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,499 | INFO     | pid: 26279
[2025-10-11 19:33:26] 2025-10-11 23:32:53,499 | INFO     | pgrp: 26279
[2025-10-11 19:33:26] 2025-10-11 23:32:53,499 | INFO     | corecount: 8
[2025-10-11 19:33:26] 2025-10-11 23:32:53,499 | INFO     | event service: False
[2025-10-11 19:33:26] 2025-10-11 23:32:53,499 | INFO     | sizes: {0: 2348851, 6: 2349113, 11: 2349141, 6143: 2375923, 6144: 2384921, 6146: 2384977, 6152: 2385299}
[2025-10-11 19:33:26] 2025-10-11 23:32:53,499 | INFO     | --------------------------------------------------
[2025-10-11 19:33:26] 2025-10-11 23:32:53,500 | INFO     | 
[2025-10-11 19:33:26] 2025-10-11 23:32:53,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 19:33:26] 2025-10-11 23:32:53,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:33:26] 2025-10-11 23:32:53,531 | INFO     | job 6838632292 has completed (purged errors)
[2025-10-11 19:33:26] 2025-10-11 23:32:53,532 | INFO     | overall cleanup function is called
[2025-10-11 19:33:26] 2025-10-11 23:32:54,535 | INFO     | --- collectZombieJob: --- 10, [26279]
[2025-10-11 19:33:26] 2025-10-11 23:32:54,535 | INFO     | zombie collector waiting for pid 26279
[2025-10-11 19:33:26] 2025-10-11 23:32:54,535 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:33:26] 2025-10-11 23:32:54,535 | INFO     | collected zombie processes
[2025-10-11 19:33:26] 2025-10-11 23:32:54,535 | INFO     | will attempt to kill all subprocesses of pid=26279
[2025-10-11 19:33:26] 2025-10-11 23:32:54,619 | INFO     | process IDs to be killed: [26279] (in reverse order)
[2025-10-11 19:33:26] 2025-10-11 23:32:54,666 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:33:26] 2025-10-11 23:32:54,667 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:33:26] 2025-10-11 23:32:54,670 | INFO     | did not find any defunct processes belonging to 26279
[2025-10-11 19:33:26] 2025-10-11 23:32:54,673 | INFO     | did not find any defunct processes belonging to 26279
[2025-10-11 19:33:26] 2025-10-11 23:32:54,674 | INFO     | ready for new job
[2025-10-11 19:33:26] 2025-10-11 23:32:54,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:33:26] 2025-10-11 23:32:54,676 | INFO     | ***************************************
[2025-10-11 19:33:26] 2025-10-11 23:32:54,676 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:33:26] 2025-10-11 23:32:54,676 | INFO     | ***************************************
[2025-10-11 19:33:26] 2025-10-11 23:32:54,676 | INFO     | 
[2025-10-11 19:33:26] 2025-10-11 23:32:54,677 | INFO     | architecture information:
[2025-10-11 19:33:26] 2025-10-11 23:32:54,677 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:33:26] 2025-10-11 23:32:54,694 | INFO     | cat /etc/os-release:
[2025-10-11 19:33:26] NAME="CentOS Linux"
[2025-10-11 19:33:26] VERSION="7 (Core)"
[2025-10-11 19:33:26] ID="centos"
[2025-10-11 19:33:26] ID_LIKE="rhel fedora"
[2025-10-11 19:33:26] VERSION_ID="7"
[2025-10-11 19:33:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:33:26] ANSI_COLOR="0;31"
[2025-10-11 19:33:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:33:26] HOME_URL="https://www.centos.org/"
[2025-10-11 19:33:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:33:26] 
[2025-10-11 19:33:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:33:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:33:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:33:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:33:26] 
[2025-10-11 19:33:26] 2025-10-11 23:32:54,695 | INFO     | ***************************************
[2025-10-11 19:33:26] 2025-10-11 23:32:55,198 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 19:33:26] 2025-10-11 23:32:55,219 | INFO     | sufficient remaining disk space (18605932544 B)
[2025-10-11 19:33:26] 2025-10-11 23:32:55,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:33:26] 2025-10-11 23:32:55,219 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:33:26] 2025-10-11 23:32:55,220 | INFO     | update_server=False
[2025-10-11 19:33:26] 2025-10-11 23:32:55,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:33:26] 2025-10-11 23:32:55,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:33:26] 2025-10-11 23:32:55,386 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 19:33:26] 2025-10-11 23:32:55,386 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 19:33:26] 2025-10-11 23:32:55,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:33:26] 2025-10-11 23:32:55,386 | INFO     | will abort loop
[2025-10-11 19:33:26] 2025-10-11 23:32:55,811 | INFO     | all data control threads have been joined
[2025-10-11 19:33:26] 2025-10-11 23:32:56,049 | INFO     | all payload control threads have been joined
[2025-10-11 19:33:26] 2025-10-11 23:32:56,066 | INFO     | all job control threads have been joined
[2025-10-11 19:33:26] 2025-10-11 23:32:56,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:33:26] 2025-10-11 23:32:56,223 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:56,225 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:56,313 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:56,319 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:56,392 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:56,817 | INFO     | [data] control thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:56,899 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:57,055 | INFO     | [payload] control thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:57,072 | INFO     | [job] control thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:57,293 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:57,306 | INFO     | [job] validate thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:57,500 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:57,614 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:58,181 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:32:58,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:33:26] 2025-10-11 23:33:02,516 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:33:06,167 | INFO     | job.realtimelogging is not enabled
[2025-10-11 19:33:26] 2025-10-11 23:33:07,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:33:26] 2025-10-11 23:33:13,775 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:33:26] 2025-10-11 23:33:15,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140028889814848)>', '<ExcThread(monitor, started 140028458026752)>']
[2025-10-11 19:33:26] 2025-10-11 23:33:20,866 | INFO     | all workflow threads have been joined
[2025-10-11 19:33:26] 2025-10-11 23:33:20,866 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:33:26] 2025-10-11 23:33:20,867 | INFO     | traces error code: 0
[2025-10-11 19:33:26] 2025-10-11 23:33:20,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:33:26] 2025-10-11 23:33:25,865 | INFO     | PID=19029 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 19:33:26] 2025-10-11 23:33:25,865 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:33:26] 2025-10-11 23:33:25,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:33:26] 2025-10-11 23:33:25,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:33:26] 2025-10-11 23:33:25,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:33:26] 2025-10-11 23:33:25,871 | INFO     | [monitor] control thread has ended
[2025-10-11 19:33:26] 2025-10-11 23:33:25,980 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:33:26] 2025-10-11 23:33:25,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:33:26] 2025-10-11 23:33:25,989 [wrapper] pilotpid: 19029
[2025-10-11 19:33:26] 2025-10-11 23:33:25,994 [wrapper] Pilot exit status: 0
[2025-10-11 19:33:26] 2025-10-11 23:33:26,014 [wrapper] pandaids: 6838632292 6838632292
[2025-10-11 19:33:26] 2025-10-11 23:33:26,057 [wrapper] cleanup supervisor_pilot 14896 19030
[2025-10-11 19:33:26] 2025-10-11 23:33:26,062 [wrapper] Test setup, not cleaning
[2025-10-11 19:33:26] 2025-10-11 23:33:26,066 [wrapper] apfmon messages muted
[2025-10-11 19:33:26] 2025-10-11 23:33:26,071 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:33:26] 2025-10-11 23:33:26,075 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:33:26]  *** Error codes and diagnostics ***
[2025-10-11 19:33:26]     "exeErrorCode": 0,
[2025-10-11 19:33:26]     "exeErrorDiag": "",
[2025-10-11 19:33:26]     "pilotErrorCode": 0,
[2025-10-11 19:33:26]     "pilotErrorDiag": "",
[2025-10-11 19:33:26]  *** Listing of results directory ***
[2025-10-11 19:33:26] total 614876
[2025-10-11 19:33:26] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 11:50 pilot3.tar.gz
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 12:14 queuedata.json
[2025-10-11 19:33:26] -rwx------ 1 boincer umatlas     36292 Oct 11 12:16 runpilot2-wrapper.sh
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas       100 Oct 11 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:33:26] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 17:01 run_atlas
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas       105 Oct 11 17:01 job.xml
[2025-10-11 19:33:26] -rw-r--r-- 3 boincer umatlas 219537803 Oct 11 17:01 EVNT.46676267._002443.pool.root.1
[2025-10-11 19:33:26] -rw-r--r-- 3 boincer umatlas 219537803 Oct 11 17:01 ATLAS.root_0
[2025-10-11 19:33:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:01 start_atlas.sh
[2025-10-11 19:33:26] drwxrwx--x 2 boincer umatlas      4096 Oct 11 17:01 shared
[2025-10-11 19:33:26] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 17:01 input.tar.gz
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas         0 Oct 11 17:01 boinc_lockfile
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas   1560580 Oct 11 17:01 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas      2547 Oct 11 17:49 pandaJob.out
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas    975528 Oct 11 17:50 agis_schedconf.cvmfs.json
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 19:27 init_data.xml
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas       529 Oct 11 19:32 boinc_task_state.xml
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas 184232654 Oct 11 19:32 HITS.46676269._060822.pool.root.1
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas        96 Oct 11 19:32 pilot_heartbeat.json
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas      1047 Oct 11 19:32 memory_monitor_summary.json
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas    333766 Oct 11 19:32 log.46676269._060822.job.log.tgz.1
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 19:32 boinc_mmap_file
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas        27 Oct 11 19:32 wrapper_checkpoint.txt
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas      7836 Oct 11 19:32 heartbeat.json
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas       745 Oct 11 19:33 pilotlog.txt
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas    877774 Oct 11 19:33 log.46676269._060822.job.log.1
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas       357 Oct 11 19:33 output.list
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas       620 Oct 11 19:33 runtime_log
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas   1228800 Oct 11 19:33 result.tar.gz
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas      8783 Oct 11 19:33 runtime_log.err
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas       782 Oct 11 19:33 hERNDmPRrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLugNDmH7wv9m.diag
[2025-10-11 19:33:26] -rw-r--r-- 1 boincer umatlas     23192 Oct 11 19:33 stderr.txt
[2025-10-11 19:33:26] HITS file was successfully produced:
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas 184232654 Oct 11 19:32 shared/HITS.pool.root.1
[2025-10-11 19:33:26]  *** Contents of shared directory: ***
[2025-10-11 19:33:26] total 396092
[2025-10-11 19:33:26] -rw-r--r-- 3 boincer umatlas 219537803 Oct 11 17:01 ATLAS.root_0
[2025-10-11 19:33:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 17:01 start_atlas.sh
[2025-10-11 19:33:26] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 17:01 input.tar.gz
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas 184232654 Oct 11 19:32 HITS.pool.root.1
[2025-10-11 19:33:26] -rw------- 1 boincer umatlas   1228800 Oct 11 19:33 result.tar.gz
19:33:28 (15064): run_atlas exited; CPU time 45905.963646
19:33:28 (15064): called boinc_finish(0)

</stderr_txt>
]]>

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