Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:57:27 (14531): wrapper (7.7.26015): starting
16:57:27 (14531): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:57:27] Arguments: --nthreads 8
[2025-10-11 16:57:27] Threads: 8
[2025-10-11 16:57:27] Checking for CVMFS
[2025-10-11 16:57:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:57:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:57:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:57:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:57:27] 2.11.2.0 2831 221951 76556 151595 2 59 12558536 20275201 1 130560 2 76094039 99.977 14035148 12026 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 16:57:27] CVMFS is ok
[2025-10-11 16:57:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:57:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:57:27] Further information can be found at the LHC@home message board.
[2025-10-11 16:57:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:57:27] Checking for apptainer binary...
[2025-10-11 16:57:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:57:27] Running /usr/bin/apptainer --version
[2025-10-11 16:57:28] apptainer version 1.3.2-1.el7
[2025-10-11 16:57:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:57:29] c-204-40.aglt2.org
[2025-10-11 16:57:29] apptainer works
[2025-10-11 16:57:29] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:57:29] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:57:29] Starting ATLAS job with PandaID=6838604504
[2025-10-11 16:57:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:10:22 (2966): wrapper (7.7.26015): starting
17:10:22 (2966): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:10:22] Arguments: --nthreads 8
[2025-10-11 17:10:22] Threads: 8
[2025-10-11 17:10:22] This job has been restarted, cleaning up previous attempt
[2025-10-11 17:10:22] Checking for CVMFS
[2025-10-11 17:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:10:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:10:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:10:23] 2.11.2.0 2876 0 28804 151595 3 1 12568144 20275200 1 130560 0 3 100.000 0 0 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:10:23] CVMFS is ok
[2025-10-11 17:10:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:10:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:10:23] Further information can be found at the LHC@home message board.
[2025-10-11 17:10:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:10:23] Checking for apptainer binary...
[2025-10-11 17:10:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:10:23] Running /usr/bin/apptainer --version
[2025-10-11 17:10:23] apptainer version 1.3.2-1.el7
[2025-10-11 17:10:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:10:26] c-204-40.aglt2.org
[2025-10-11 17:10:26] apptainer works
[2025-10-11 17:10:26] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:10:26] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:10:26] Starting ATLAS job with PandaID=6838604504
[2025-10-11 17:10:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:13:04]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:13:04] 2025-10-11 23:12:28,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:13:04] 2025-10-11 23:12:28,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:13:04] 2025-10-11 23:12:28,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:13:04] 2025-10-11 23:12:28,221 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:13:04] 2025-10-11 23:12:28,221 | INFO     | sum of square deviations: 522502820.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,222 | INFO     | sum of deviations: 18860722857.999992
[2025-10-11 19:13:04] 2025-10-11 23:12:28,222 | INFO     | mean x: 1760220678.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,222 | INFO     | mean y: 2504192.0420168065
[2025-10-11 19:13:04] 2025-10-11 23:12:28,222 | INFO     | -- intersect: -63535974656.12734
[2025-10-11 19:13:04] 2025-10-11 23:12:28,223 | INFO     | intersect: -63535974656.12734
[2025-10-11 19:13:04] 2025-10-11 23:12:28,223 | INFO     | chi2: 1.6401282977783707
[2025-10-11 19:13:04] 2025-10-11 23:12:28,223 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 19:13:04] 2025-10-11 23:12:28,224 | INFO     | sum of deviations: 18330963234.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,224 | INFO     | mean x: 1760220525.5
[2025-10-11 19:13:04] 2025-10-11 23:12:28,224 | INFO     | mean y: 2502911.701754386
[2025-10-11 19:13:04] 2025-10-11 23:12:28,224 | INFO     | -- intersect: -70238840331.07605
[2025-10-11 19:13:04] 2025-10-11 23:12:28,225 | INFO     | intersect: -70238840331.07605
[2025-10-11 19:13:04] 2025-10-11 23:12:28,225 | INFO     | chi2: 1.640830027506791
[2025-10-11 19:13:04] 2025-10-11 23:12:28,225 | INFO     | current chi2=1.640830027506791 (change=-0.042785050984788485 %)
[2025-10-11 19:13:04] 2025-10-11 23:12:28,225 | INFO     | right removable region: 113
[2025-10-11 19:13:04] 2025-10-11 23:12:28,225 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 19:13:04] 2025-10-11 23:12:28,226 | INFO     | sum of deviations: -1387266819.000001
[2025-10-11 19:13:04] 2025-10-11 23:12:28,226 | INFO     | mean x: 1760220830.5
[2025-10-11 19:13:04] 2025-10-11 23:12:28,226 | INFO     | mean y: 2552345.8421052634
[2025-10-11 19:13:04] 2025-10-11 23:12:28,226 | INFO     | -- intersect: 5318339652.990057
[2025-10-11 19:13:04] 2025-10-11 23:12:28,226 | INFO     | intersect: 5318339652.990057
[2025-10-11 19:13:04] 2025-10-11 23:12:28,227 | INFO     | chi2: 0.055385999227146154
[2025-10-11 19:13:04] 2025-10-11 23:12:28,227 | INFO     | current chi2=0.055385999227146154 (change=96.62306910366895 %)
[2025-10-11 19:13:04] 2025-10-11 23:12:28,227 | INFO     | sum of square deviations: 401533110.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,227 | INFO     | sum of deviations: -4337291418.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,228 | INFO     | mean x: 1760220983.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,228 | INFO     | mean y: 2559977.7981651374
[2025-10-11 19:13:04] 2025-10-11 23:12:28,228 | INFO     | -- intersect: 19016163521.848175
[2025-10-11 19:13:04] 2025-10-11 23:12:28,228 | INFO     | intersect: 19016163521.848175
[2025-10-11 19:13:04] 2025-10-11 23:12:28,228 | INFO     | chi2: 0.010094377160003607
[2025-10-11 19:13:04] 2025-10-11 23:12:28,228 | INFO     | current chi2=0.010094377160003607 (change=81.77449662214258 %)
[2025-10-11 19:13:04] 2025-10-11 23:12:28,229 | INFO     | sum of square deviations: 348769330.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,229 | INFO     | sum of deviations: -4480543757.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,229 | INFO     | mean x: 1760221135.5
[2025-10-11 19:13:04] 2025-10-11 23:12:28,230 | INFO     | mean y: 2560379.2115384615
[2025-10-11 19:13:04] 2025-10-11 23:12:28,230 | INFO     | -- intersect: 22615637680.486786
[2025-10-11 19:13:04] 2025-10-11 23:12:28,230 | INFO     | intersect: 22615637680.486786
[2025-10-11 19:13:04] 2025-10-11 23:12:28,230 | INFO     | chi2: 0.008338760270452317
[2025-10-11 19:13:04] 2025-10-11 23:12:28,230 | INFO     | current chi2=0.008338760270452317 (change=17.392027875751204 %)
[2025-10-11 19:13:04] 2025-10-11 23:12:28,230 | INFO     | left removable region: 30
[2025-10-11 19:13:04] 2025-10-11 23:12:28,231 | INFO     | sum of square deviations: 177275882.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,231 | INFO     | sum of deviations: -3242973073.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,231 | INFO     | mean x: 1760221410.0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,231 | INFO     | mean y: 2558999.4096385543
[2025-10-11 19:13:04] 2025-10-11 23:12:28,231 | INFO     | -- intersect: 32202938265.598217
[2025-10-11 19:13:04] 2025-10-11 23:12:28,231 | INFO     | intersect: 32202938265.598217
[2025-10-11 19:13:04] 2025-10-11 23:12:28,232 | INFO     | chi2: 0.006551083186635336
[2025-10-11 19:13:04] 2025-10-11 23:12:28,232 | INFO     | -- intersect: 32202938265.598217
[2025-10-11 19:13:04] 2025-10-11 23:12:28,232 | INFO     | current memory leak: -18.29 B/s (using 83 data points, chi2=0.01)
[2025-10-11 19:13:04] 2025-10-11 23:12:28,232 | INFO     | could have reported an average CPU frequency of 1967 MHz (7 samples)
[2025-10-11 19:13:04] 2025-10-11 23:12:28,232 | INFO     | ..............................
[2025-10-11 19:13:04] 2025-10-11 23:12:28,233 | INFO     | . Timing measurements:
[2025-10-11 19:13:04] 2025-10-11 23:12:28,233 | INFO     | . get job = 0 s
[2025-10-11 19:13:04] 2025-10-11 23:12:28,233 | INFO     | . initial setup = 1 s
[2025-10-11 19:13:04] 2025-10-11 23:12:28,233 | INFO     | . payload setup = 9 s
[2025-10-11 19:13:04] 2025-10-11 23:12:28,233 | INFO     | . stage-in = 0 s
[2025-10-11 19:13:04] 2025-10-11 23:12:28,233 | INFO     | . payload execution = 7260 s
[2025-10-11 19:13:04] 2025-10-11 23:12:28,233 | INFO     | . stage-out = 0 s
[2025-10-11 19:13:04] 2025-10-11 23:12:28,233 | INFO     | . log creation = 0 s
[2025-10-11 19:13:04] 2025-10-11 23:12:28,233 | INFO     | ..............................
[2025-10-11 19:13:04] 2025-10-11 23:12:28,324 | INFO     | 
[2025-10-11 19:13:04] 2025-10-11 23:12:28,324 | INFO     | job summary report
[2025-10-11 19:13:04] 2025-10-11 23:12:28,324 | INFO     | --------------------------------------------------
[2025-10-11 19:13:04] 2025-10-11 23:12:28,325 | INFO     | PanDA job id: 6838604504
[2025-10-11 19:13:04] 2025-10-11 23:12:28,325 | INFO     | task id: 46676269
[2025-10-11 19:13:04] 2025-10-11 23:12:28,325 | INFO     | errors: (none)
[2025-10-11 19:13:04] 2025-10-11 23:12:28,325 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:13:04] 2025-10-11 23:12:28,325 | INFO     | pilot state: finished 
[2025-10-11 19:13:04] 2025-10-11 23:12:28,326 | INFO     | transexitcode: 0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,326 | INFO     | exeerrorcode: 0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,326 | INFO     | exeerrordiag: 
[2025-10-11 19:13:04] 2025-10-11 23:12:28,326 | INFO     | exitcode: 0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,326 | INFO     | exitmsg: OK
[2025-10-11 19:13:04] 2025-10-11 23:12:28,326 | INFO     | cpuconsumptiontime: 53592 s
[2025-10-11 19:13:04] 2025-10-11 23:12:28,327 | INFO     | nevents: 400
[2025-10-11 19:13:04] 2025-10-11 23:12:28,327 | INFO     | neventsw: 0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,327 | INFO     | pid: 14844
[2025-10-11 19:13:04] 2025-10-11 23:12:28,327 | INFO     | pgrp: 14844
[2025-10-11 19:13:04] 2025-10-11 23:12:28,327 | INFO     | corecount: 8
[2025-10-11 19:13:04] 2025-10-11 23:12:28,327 | INFO     | event service: False
[2025-10-11 19:13:04] 2025-10-11 23:12:28,328 | INFO     | sizes: {0: 2348855, 6: 2349117, 11: 2349145, 7274: 2376430, 7275: 2385428, 7279: 2385512, 7284: 2385834}
[2025-10-11 19:13:04] 2025-10-11 23:12:28,328 | INFO     | --------------------------------------------------
[2025-10-11 19:13:04] 2025-10-11 23:12:28,328 | INFO     | 
[2025-10-11 19:13:04] 2025-10-11 23:12:28,328 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 19:13:04] 2025-10-11 23:12:28,372 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,372 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,373 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:13:04] 2025-10-11 23:12:28,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:13:04] 2025-10-11 23:12:28,375 | INFO     | job 6838604504 has completed (purged errors)
[2025-10-11 19:13:04] 2025-10-11 23:12:28,376 | INFO     | overall cleanup function is called
[2025-10-11 19:13:04] 2025-10-11 23:12:29,383 | INFO     | --- collectZombieJob: --- 10, [14844]
[2025-10-11 19:13:04] 2025-10-11 23:12:29,384 | INFO     | zombie collector waiting for pid 14844
[2025-10-11 19:13:04] 2025-10-11 23:12:29,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:13:04] 2025-10-11 23:12:29,384 | INFO     | collected zombie processes
[2025-10-11 19:13:04] 2025-10-11 23:12:29,384 | INFO     | will attempt to kill all subprocesses of pid=14844
[2025-10-11 19:13:04] 2025-10-11 23:12:29,478 | INFO     | process IDs to be killed: [14844] (in reverse order)
[2025-10-11 19:13:04] 2025-10-11 23:12:29,533 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:13:04] 2025-10-11 23:12:29,533 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:13:04] 2025-10-11 23:12:29,537 | INFO     | did not find any defunct processes belonging to 14844
[2025-10-11 19:13:04] 2025-10-11 23:12:29,541 | INFO     | did not find any defunct processes belonging to 14844
[2025-10-11 19:13:04] 2025-10-11 23:12:29,541 | INFO     | ready for new job
[2025-10-11 19:13:04] 2025-10-11 23:12:29,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:13:04] 2025-10-11 23:12:29,544 | INFO     | ***************************************
[2025-10-11 19:13:04] 2025-10-11 23:12:29,544 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:13:04] 2025-10-11 23:12:29,544 | INFO     | ***************************************
[2025-10-11 19:13:04] 2025-10-11 23:12:29,544 | INFO     | 
[2025-10-11 19:13:04] 2025-10-11 23:12:29,545 | INFO     | architecture information:
[2025-10-11 19:13:04] 2025-10-11 23:12:29,545 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:13:04] 2025-10-11 23:12:29,562 | INFO     | cat /etc/os-release:
[2025-10-11 19:13:04] NAME="CentOS Linux"
[2025-10-11 19:13:04] VERSION="7 (Core)"
[2025-10-11 19:13:04] ID="centos"
[2025-10-11 19:13:04] ID_LIKE="rhel fedora"
[2025-10-11 19:13:04] VERSION_ID="7"
[2025-10-11 19:13:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:13:04] ANSI_COLOR="0;31"
[2025-10-11 19:13:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:13:04] HOME_URL="https://www.centos.org/"
[2025-10-11 19:13:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:13:04] 
[2025-10-11 19:13:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:13:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:13:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:13:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:13:04] 
[2025-10-11 19:13:04] 2025-10-11 23:12:29,562 | INFO     | ***************************************
[2025-10-11 19:13:04] 2025-10-11 23:12:30,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 19:13:04] 2025-10-11 23:12:30,082 | INFO     | sufficient remaining disk space (18554552320 B)
[2025-10-11 19:13:04] 2025-10-11 23:12:30,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:13:04] 2025-10-11 23:12:30,083 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:13:04] 2025-10-11 23:12:30,083 | INFO     | update_server=False
[2025-10-11 19:13:04] 2025-10-11 23:12:30,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:13:04] 2025-10-11 23:12:30,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:13:04] 2025-10-11 23:12:30,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:13:04] 2025-10-11 23:12:30,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:13:04] 2025-10-11 23:12:30,251 | INFO     | aborting loop
[2025-10-11 19:13:04] 2025-10-11 23:12:30,868 | INFO     | all data control threads have been joined
[2025-10-11 19:13:04] 2025-10-11 23:12:31,085 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:31,090 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:31,122 | INFO     | all payload control threads have been joined
[2025-10-11 19:13:04] 2025-10-11 23:12:31,256 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:31,569 | INFO     | all job control threads have been joined
[2025-10-11 19:13:04] 2025-10-11 23:12:31,575 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:31,737 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:31,873 | INFO     | [data] control thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:31,884 | INFO     | [job] validate thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:32,090 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:32,128 | INFO     | [payload] control thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:32,156 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:32,256 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:32,256 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:32,272 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:32,574 | INFO     | [job] control thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:33,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:13:04] 2025-10-11 23:12:37,210 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:40,589 | INFO     | job.realtimelogging is not enabled
[2025-10-11 19:13:04] 2025-10-11 23:12:41,595 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:13:04] 2025-10-11 23:12:58,397 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:13:04] 2025-10-11 23:12:58,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526656345920)>', '<ExcThread(monitor, started 140526070253312)>']
[2025-10-11 19:13:04] 2025-10-11 23:13:00,667 | INFO     | PID=8352 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 19:13:04] 2025-10-11 23:13:00,668 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:13:04] 2025-10-11 23:13:00,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:13:04] 2025-10-11 23:13:00,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:13:04] 2025-10-11 23:13:00,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:13:04] 2025-10-11 23:13:00,669 | INFO     | [monitor] control thread has ended
[2025-10-11 19:13:04] 2025-10-11 23:13:03,951 | INFO     | all workflow threads have been joined
[2025-10-11 19:13:04] 2025-10-11 23:13:03,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:13:04] 2025-10-11 23:13:03,952 | INFO     | traces error code: 0
[2025-10-11 19:13:04] 2025-10-11 23:13:03,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:13:04] 2025-10-11 23:13:04,063 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:13:04] 2025-10-11 23:13:04,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:13:04] 2025-10-11 23:13:04,072 [wrapper] pilotpid: 8352
[2025-10-11 19:13:04] 2025-10-11 23:13:04,076 [wrapper] Pilot exit status: 0
[2025-10-11 19:13:04] 2025-10-11 23:13:04,133 [wrapper] pandaids: 6838604504 6838604504
[2025-10-11 19:13:04] 2025-10-11 23:13:04,176 [wrapper] cleanup supervisor_pilot  9779 8353
[2025-10-11 19:13:04] 2025-10-11 23:13:04,181 [wrapper] Test setup, not cleaning
[2025-10-11 19:13:04] 2025-10-11 23:13:04,185 [wrapper] apfmon messages muted
[2025-10-11 19:13:04] 2025-10-11 23:13:04,189 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:13:04] 2025-10-11 23:13:04,193 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:13:04]  *** Error codes and diagnostics ***
[2025-10-11 19:13:04]     "exeErrorCode": 0,
[2025-10-11 19:13:04]     "exeErrorDiag": "",
[2025-10-11 19:13:04]     "pilotErrorCode": 0,
[2025-10-11 19:13:04]     "pilotErrorDiag": "",
[2025-10-11 19:13:04]  *** Listing of results directory ***
[2025-10-11 19:13:04] total 629280
[2025-10-11 19:13:04] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 11:42 pilot3.tar.gz
[2025-10-11 19:13:04] -rwx------ 1 boincer umatlas     36292 Oct 11 11:47 runpilot2-wrapper.sh
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 11:47 queuedata.json
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas       100 Oct 11 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:13:04] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 16:57 run_atlas
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas       105 Oct 11 16:57 job.xml
[2025-10-11 19:13:04] -rw-r--r-- 3 boincer umatlas 221681018 Oct 11 16:57 EVNT.46676267._002421.pool.root.1
[2025-10-11 19:13:04] -rw-r--r-- 3 boincer umatlas 221681018 Oct 11 16:57 ATLAS.root_0
[2025-10-11 19:13:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:57 start_atlas.sh
[2025-10-11 19:13:04] drwxrwx--x 2 boincer umatlas      4096 Oct 11 16:57 shared
[2025-10-11 19:13:04] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 16:57 input.tar.gz
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas         0 Oct 11 16:57 boinc_lockfile
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas   1560580 Oct 11 16:57 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 17:10 pandaJob.out
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas    975528 Oct 11 17:10 agis_schedconf.cvmfs.json
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas 194364540 Oct 11 19:11 HITS.46676269._060279.pool.root.1
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas       529 Oct 11 19:11 boinc_task_state.xml
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas      1049 Oct 11 19:12 memory_monitor_summary.json
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas    348169 Oct 11 19:12 log.46676269._060279.job.log.tgz.1
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas      7849 Oct 11 19:12 heartbeat.json
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 19:12 init_data.xml
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 19:12 boinc_mmap_file
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas        27 Oct 11 19:12 wrapper_checkpoint.txt
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas        96 Oct 11 19:13 pilot_heartbeat.json
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas      4817 Oct 11 19:13 pilotlog.txt
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas   1027927 Oct 11 19:13 log.46676269._060279.job.log.1
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas       357 Oct 11 19:13 output.list
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas       620 Oct 11 19:13 runtime_log
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas   1392640 Oct 11 19:13 result.tar.gz
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas       785 Oct 11 19:13 XdPMDm3zqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDogNDmZLfvMn.diag
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas      8788 Oct 11 19:13 runtime_log.err
[2025-10-11 19:13:04] -rw-r--r-- 1 boincer umatlas     22979 Oct 11 19:13 stderr.txt
[2025-10-11 19:13:04] HITS file was successfully produced:
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas 194364540 Oct 11 19:11 shared/HITS.pool.root.1
[2025-10-11 19:13:04]  *** Contents of shared directory: ***
[2025-10-11 19:13:04] total 408240
[2025-10-11 19:13:04] -rw-r--r-- 3 boincer umatlas 221681018 Oct 11 16:57 ATLAS.root_0
[2025-10-11 19:13:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:57 start_atlas.sh
[2025-10-11 19:13:04] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 16:57 input.tar.gz
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas 194364540 Oct 11 19:11 HITS.pool.root.1
[2025-10-11 19:13:04] -rw------- 1 boincer umatlas   1392640 Oct 11 19:13 result.tar.gz
19:13:05 (2966): run_atlas exited; CPU time 53608.881891
19:13:05 (2966): called boinc_finish(0)

</stderr_txt>
]]>

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