Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:48:24 (1082011): wrapper (7.7.26015): starting
16:48:24 (1082011): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 16:48:24] Arguments: --nthreads 12
[2025-10-11 16:48:24] Threads: 12
[2025-10-11 16:48:24] Checking for CVMFS
[2025-10-11 16:48:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:48:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:48:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:48:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:48:24] 2.13.2.0 3683012 11847 148128 151595 3 196 36335397 40960001 6472 16776704 0 128795609 99.842 55037566 32593 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 16:48:24] CVMFS is ok
[2025-10-11 16:48:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:48:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:48:24] Further information can be found at the LHC@home message board.
[2025-10-11 16:48:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:48:24] Checking for apptainer binary...
[2025-10-11 16:48:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:48:24] Running /usr/bin/apptainer --version
[2025-10-11 16:48:24] apptainer version 1.4.3-1.el9
[2025-10-11 16:48:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:48:24] c8-7-4.aglt2.org
[2025-10-11 16:48:24] apptainer works
[2025-10-11 16:48:24] Set ATHENA_PROC_NUMBER=12
[2025-10-11 16:48:24] Set ATHENA_CORE_NUMBER=12
[2025-10-11 16:48:24] Starting ATLAS job with PandaID=6838452853
[2025-10-11 16:48:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:22:40]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:22:40]  lfn=log.46676269._058810.job.log.tgz.1
[2025-10-11 17:22:40]  mtime=0
[2025-10-11 17:22:40]  protocol_id=None
[2025-10-11 17:22:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 17:22:40]  replicas=None
[2025-10-11 17:22:40]  scope=mc23_13p6TeV
[2025-10-11 17:22:40]  status=None
[2025-10-11 17:22:40]  status_code=0
[2025-10-11 17:22:40]  storage_token=
[2025-10-11 17:22:40]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6838452853/log.46676269._058810.job.log.tgz.1
[2025-10-11 17:22:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/db/log.46676269._058810.job.log.tgz.1
[2025-10-11 17:22:40]  workdir=None
[2025-10-11 17:22:40] ]
[2025-10-11 17:22:40] 2025-10-11 21:21:52,909 | INFO     | transferring file log.46676269._058810.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6838452853/log.46676269._058810.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 17:22:40] 2025-10-11 21:21:52,909 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6838452853/log.46676269._058810.job.log.tgz.1 /tmp/boinchome/slots/8/log.46676269._058810.job
[2025-10-11 17:22:40] 2025-10-11 21:21:52,925 | INFO     | adding to output.list: log.46676269._058810.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/db/log.46676269._058810.job.log.tg
[2025-10-11 17:22:40] 2025-10-11 21:21:52,926 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 17:22:40] 2025-10-11 21:21:52,926 | INFO     | summary of transferred files:
[2025-10-11 17:22:40] 2025-10-11 21:21:52,926 | INFO     |  -- lfn=log.46676269._058810.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 17:22:40] 2025-10-11 21:21:52,926 | INFO     | stage-out finished correctly
[2025-10-11 17:22:40] 2025-10-11 21:21:53,258 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 17:22:40] 2025-10-11 21:21:53,310 | INFO     | job 6838452853 has state=finished
[2025-10-11 17:22:40] 2025-10-11 21:21:53,310 | INFO     | preparing for final server update for job 6838452853 in state='finished'
[2025-10-11 17:22:40] 2025-10-11 21:21:53,311 | INFO     | this job has now completed (state=finished)
[2025-10-11 17:22:40] 2025-10-11 21:21:53,311 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 17:22:40] 2025-10-11 21:21:53,311 | INFO     | log transfer has been attempted: DONE
[2025-10-11 17:22:40] 2025-10-11 21:21:53,311 | INFO     | job 6838452853 has finished - writing final server update
[2025-10-11 17:22:40] 2025-10-11 21:21:53,311 | INFO     | total number of processed events: 400 (read)
[2025-10-11 17:22:40] 2025-10-11 21:21:53,311 | INFO     | executing command: lscpu
[2025-10-11 17:22:40] 2025-10-11 21:21:53,364 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 17:22:40] 2025-10-11 21:21:54,481 | INFO     | monitor loop #152: job 0:6838452853 is in state 'finished'
[2025-10-11 17:22:40] 2025-10-11 21:21:54,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:22:40] 2025-10-11 21:21:54,689 | INFO     | time since job start (2003s) is within the limit (172800.0s)
[2025-10-11 17:22:40] 2025-10-11 21:21:56,101 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 17:22:40] 2025-10-11 21:21:56,119 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3529.4676874999936
[2025-10-11 17:22:40] 2025-10-11 21:21:56,132 | INFO     | PID=1087342 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:22:40] 2025-10-11 21:21:56,133 | INFO     | .. there are 10 such processes running
[2025-10-11 17:22:40] 2025-10-11 21:21:56,135 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6838452853/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:22:40] 2025-10-11 21:21:56,135 | INFO     | extracted standard info from prmon json
[2025-10-11 17:22:40] 2025-10-11 21:21:56,136 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:22:40] 2025-10-11 21:21:56,136 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:22:40] 2025-10-11 21:21:56,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:22:40] 2025-10-11 21:21:56,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:22:40] 2025-10-11 21:21:56,136 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:22:40] 2025-10-11 21:21:56,136 | INFO     | sum of square deviations: 5441962.5
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | sum of deviations: 111843469.49999999
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | mean x: 1760216799.5
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | mean y: 2389974.423076923
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | -- intersect: -36173668557.45138
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | intersect: -36173668557.45138
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | chi2: 0.001414430046535156
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | -- intersect: -36173668557.45138
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | current memory leak: 20.55 B/s (using 26 data points, chi2=0.00)
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | could have reported an average CPU frequency of 3541 MHz (5 samples)
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | ..............................
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | . Timing measurements:
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | . get job = 0 s
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | . initial setup = 2 s
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | . payload setup = 3 s
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | . stage-in = 0 s
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | . payload execution = 1979 s
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | . stage-out = 0 s
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | . log creation = 0 s
[2025-10-11 17:22:40] 2025-10-11 21:21:56,137 | INFO     | ..............................
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | 
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | job summary report
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | --------------------------------------------------
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | PanDA job id: 6838452853
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | task id: 46676269
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | errors: (none)
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | pilot state: finished 
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | transexitcode: 0
[2025-10-11 17:22:40] 2025-10-11 21:21:56,380 | INFO     | exeerrorcode: 0
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | exeerrordiag: 
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | exitcode: 0
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | exitmsg: OK
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | cpuconsumptiontime: 21593 s
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | nevents: 400
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | neventsw: 0
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | pid: 1100355
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | pgrp: 1100355
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | corecount: 12
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | event service: False
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | sizes: {0: 2348743, 3: 2349119, 11: 2349147, 1986: 2374151, 1988: 2383205, 1991: 2383375}
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | --------------------------------------------------
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | 
[2025-10-11 17:22:40] 2025-10-11 21:21:56,381 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | job 6838452853 has completed (purged errors)
[2025-10-11 17:22:40] 2025-10-11 21:21:56,397 | INFO     | overall cleanup function is called
[2025-10-11 17:22:40] 2025-10-11 21:21:57,404 | INFO     | --- collectZombieJob: --- 10, [1100355]
[2025-10-11 17:22:40] 2025-10-11 21:21:57,404 | INFO     | zombie collector waiting for pid 1100355
[2025-10-11 17:22:40] 2025-10-11 21:21:57,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:22:40] 2025-10-11 21:21:57,404 | INFO     | collected zombie processes
[2025-10-11 17:22:40] 2025-10-11 21:21:57,404 | INFO     | will attempt to kill all subprocesses of pid=1100355
[2025-10-11 17:22:40] 2025-10-11 21:21:57,744 | INFO     | process IDs to be killed: [1100355] (in reverse order)
[2025-10-11 17:22:40] 2025-10-11 21:21:57,832 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:22:40] 2025-10-11 21:21:57,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:22:40] 2025-10-11 21:21:57,848 | INFO     | did not find any defunct processes belonging to 1100355
[2025-10-11 17:22:40] 2025-10-11 21:21:57,861 | INFO     | did not find any defunct processes belonging to 1100355
[2025-10-11 17:22:40] 2025-10-11 21:21:57,862 | INFO     | ready for new job
[2025-10-11 17:22:40] 2025-10-11 21:21:57,862 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:22:40] 2025-10-11 21:21:57,863 | INFO     | ***************************************
[2025-10-11 17:22:40] 2025-10-11 21:21:57,863 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:22:40] 2025-10-11 21:21:57,863 | INFO     | ***************************************
[2025-10-11 17:22:40] 2025-10-11 21:21:57,863 | INFO     | 
[2025-10-11 17:22:40] 2025-10-11 21:21:57,879 | INFO     | architecture information:
[2025-10-11 17:22:40] 2025-10-11 21:21:57,879 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:22:40] 2025-10-11 21:21:57,893 | INFO     | cat /etc/os-release:
[2025-10-11 17:22:40] NAME="CentOS Linux"
[2025-10-11 17:22:40] VERSION="7 (Core)"
[2025-10-11 17:22:40] ID="centos"
[2025-10-11 17:22:40] ID_LIKE="rhel fedora"
[2025-10-11 17:22:40] VERSION_ID="7"
[2025-10-11 17:22:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:22:40] ANSI_COLOR="0;31"
[2025-10-11 17:22:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:22:40] HOME_URL="https://www.centos.org/"
[2025-10-11 17:22:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:22:40] 
[2025-10-11 17:22:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:22:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:22:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:22:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:22:40] 
[2025-10-11 17:22:40] 2025-10-11 21:21:57,893 | INFO     | ***************************************
[2025-10-11 17:22:40] 2025-10-11 21:21:58,396 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-11 17:22:40] 2025-10-11 21:21:58,408 | INFO     | sufficient remaining disk space (168005992448 B)
[2025-10-11 17:22:40] 2025-10-11 21:21:58,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:22:40] 2025-10-11 21:21:58,409 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:22:40] 2025-10-11 21:21:58,409 | INFO     | update_server=False
[2025-10-11 17:22:40] 2025-10-11 21:21:58,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:22:40] 2025-10-11 21:21:58,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:22:40] 2025-10-11 21:21:58,409 | INFO     | aborting loop
[2025-10-11 17:22:40] 2025-10-11 21:21:58,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:22:40] 2025-10-11 21:21:58,530 | INFO     | all data control threads have been joined
[2025-10-11 17:22:40] 2025-10-11 21:21:59,076 | INFO     | all payload control threads have been joined
[2025-10-11 17:22:40] 2025-10-11 21:21:59,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:22:40] 2025-10-11 21:21:59,414 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:21:59,415 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:21:59,427 | INFO     | all job control threads have been joined
[2025-10-11 17:22:40] 2025-10-11 21:21:59,432 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:21:59,535 | INFO     | [data] control thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:21:59,860 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:00,082 | INFO     | [payload] control thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:00,333 | INFO     | [job] validate thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:00,396 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:00,416 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:00,433 | INFO     | [job] control thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:00,493 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:00,520 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:00,580 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:01,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:22:40] 2025-10-11 21:22:02,184 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:03,322 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:08,967 | INFO     | job.realtimelogging is not enabled
[2025-10-11 17:22:40] 2025-10-11 21:22:09,973 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:22:40] 2025-10-11 21:22:28,475 | INFO     | PID=1087342 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:22:40] 2025-10-11 21:22:28,475 | INFO     | .. there are 10 such processes running
[2025-10-11 17:22:40] 2025-10-11 21:22:28,475 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:22:40] 2025-10-11 21:22:28,476 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:22:40] 2025-10-11 21:22:28,476 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:22:40] 2025-10-11 21:22:34,115 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:22:40] 2025-10-11 21:22:34,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005610411840)>', '<ExcThread(monitor, started 140004953138944)>']
[2025-10-11 17:22:40] 2025-10-11 21:22:34,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:22:40] 2025-10-11 21:22:34,505 | INFO     | [monitor] control thread has ended
[2025-10-11 17:22:40] 2025-10-11 21:22:39,386 | INFO     | all workflow threads have been joined
[2025-10-11 17:22:40] 2025-10-11 21:22:39,386 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:22:40] 2025-10-11 21:22:39,386 | INFO     | traces error code: 0
[2025-10-11 17:22:40] 2025-10-11 21:22:39,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:22:40] 2025-10-11 21:22:39,443 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:22:40] 2025-10-11 21:22:39,445 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:22:40] 2025-10-11 21:22:39,447 [wrapper] pilotpid: 1087342
[2025-10-11 17:22:40] 2025-10-11 21:22:39,450 [wrapper] Pilot exit status: 0
[2025-10-11 17:22:40] 2025-10-11 21:22:39,455 [wrapper] pandaids: 6838452853
[2025-10-11 17:22:40] 2025-10-11 21:22:39,522 [wrapper] cleanup supervisor_pilot 1267103 1087343
[2025-10-11 17:22:40] 2025-10-11 21:22:39,524 [wrapper] Test setup, not cleaning
[2025-10-11 17:22:40] 2025-10-11 21:22:39,525 [wrapper] apfmon messages muted
[2025-10-11 17:22:40] 2025-10-11 21:22:39,527 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:22:40] 2025-10-11 21:22:39,529 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:22:40]  *** Error codes and diagnostics ***
[2025-10-11 17:22:40]     "exeErrorCode": 0,
[2025-10-11 17:22:40]     "exeErrorDiag": "",
[2025-10-11 17:22:40]     "pilotErrorCode": 0,
[2025-10-11 17:22:40]     "pilotErrorDiag": "",
[2025-10-11 17:22:40]  *** Listing of results directory ***
[2025-10-11 17:22:40] total 408876
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 09:40 pilot3.tar.gz
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 09:53 queuedata.json
[2025-10-11 17:22:40] -rwx------. 1 boincer umatlas     36292 Oct 11 09:54 runpilot2-wrapper.sh
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:22:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:48 run_atlas
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:48 job.xml
[2025-10-11 17:22:40] -rw-r--r--. 2 boincer umatlas 219355287 Oct 11 16:48 EVNT.46676267._002358.pool.root.1
[2025-10-11 17:22:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:48 start_atlas.sh
[2025-10-11 17:22:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:48 shared
[2025-10-11 17:22:40] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 16:48 input.tar.gz
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:48 boinc_lockfile
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 16:48 pandaJob.out
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas    975528 Oct 11 16:48 agis_schedconf.cvmfs.json
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas   1560580 Oct 11 16:48 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:22:40] drwx------. 5 boincer umatlas      4096 Oct 11 16:48 pilot3
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas      7164 Oct 11 17:18 init_data.xml
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas 194074801 Oct 11 17:21 HITS.46676269._058810.pool.root.1
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas       529 Oct 11 17:21 boinc_task_state.xml
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas      1028 Oct 11 17:21 memory_monitor_summary.json
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas    349916 Oct 11 17:21 log.46676269._058810.job.log.tgz.1
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas      7771 Oct 11 17:21 heartbeat.json
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas        95 Oct 11 17:22 pilot_heartbeat.json
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas      4897 Oct 11 17:22 pilotlog.txt
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas    327281 Oct 11 17:22 log.46676269._058810.job.log.1
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas       357 Oct 11 17:22 output.list
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas       620 Oct 11 17:22 runtime_log
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas    696320 Oct 11 17:22 result.tar.gz
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 17:22 runtime_log.err
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas       650 Oct 11 17:22 a22NDm8DpR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3ZgNDmAOudJn.diag
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas        27 Oct 11 17:22 wrapper_checkpoint.txt
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 17:22 boinc_mmap_file
[2025-10-11 17:22:40] -rw-r--r--. 1 boincer umatlas     21671 Oct 11 17:22 stderr.txt
[2025-10-11 17:22:40] HITS file was successfully produced:
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas 194074801 Oct 11 17:21 shared/HITS.pool.root.1
[2025-10-11 17:22:40]  *** Contents of shared directory: ***
[2025-10-11 17:22:40] total 405008
[2025-10-11 17:22:40] -rw-r--r--. 2 boincer umatlas 219355287 Oct 11 16:48 ATLAS.root_0
[2025-10-11 17:22:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:48 start_atlas.sh
[2025-10-11 17:22:40] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 16:48 input.tar.gz
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas 194074801 Oct 11 17:21 HITS.pool.root.1
[2025-10-11 17:22:40] -rw-------. 1 boincer umatlas    696320 Oct 11 17:22 result.tar.gz
17:22:42 (1082011): run_atlas exited; CPU time 21627.868929
17:22:42 (1082011): called boinc_finish(0)

</stderr_txt>
]]>

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