Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:13:12 (2993005): wrapper (7.7.26015): starting
01:13:12 (2993005): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 01:13:12] Arguments: --nthreads 12
[2025-10-12 01:13:12] Threads: 12
[2025-10-12 01:13:12] Checking for CVMFS
[2025-10-12 01:13:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:13:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:13:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:13:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:13:12] 2.13.1.0 1560427 3283 95148 151600 4 1 2961270 4097025 0 130560 0 3944486 99.990 239082 8776 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 01:13:12] CVMFS is ok
[2025-10-12 01:13:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:13:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:13:12] Further information can be found at the LHC@home message board.
[2025-10-12 01:13:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:13:12] Checking for apptainer binary...
[2025-10-12 01:13:12] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 01:13:12] apptainer is not installed, using version from CVMFS
[2025-10-12 01:13:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:13:12] pckelar5.cern.ch
[2025-10-12 01:13:12] apptainer works
[2025-10-12 01:13:12] Set ATHENA_PROC_NUMBER=12
[2025-10-12 01:13:12] Set ATHENA_CORE_NUMBER=12
[2025-10-12 01:13:12] Starting ATLAS job with PandaID=6838631691
[2025-10-12 01:13:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:22:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:22:38]  replicas=None
[2025-10-12 02:22:38]  scope=mc23_13p6TeV
[2025-10-12 02:22:38]  status=None
[2025-10-12 02:22:38]  status_code=0
[2025-10-12 02:22:38]  storage_token=
[2025-10-12 02:22:38]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6838631691/log.46676269._060496.job.log.tgz.1
[2025-10-12 02:22:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/ff/log.46676269._060496.job.log.tgz.1
[2025-10-12 02:22:38]  workdir=None
[2025-10-12 02:22:38] ]
[2025-10-12 02:22:38] 2025-10-12 00:21:59,372 | INFO     | transferring file log.46676269._060496.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6838631691/log.46676269._060496.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 02:22:38] 2025-10-12 00:21:59,372 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6838631691/log.46676269._060496.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._060496.job
[2025-10-12 02:22:38] 2025-10-12 00:21:59,388 | INFO     | adding to output.list: log.46676269._060496.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/ff/log.46676269._060496.job.log.tg
[2025-10-12 02:22:38] 2025-10-12 00:21:59,388 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 02:22:38] 2025-10-12 00:21:59,388 | INFO     | summary of transferred files:
[2025-10-12 02:22:38] 2025-10-12 00:21:59,388 | INFO     |  -- lfn=log.46676269._060496.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 02:22:38] 2025-10-12 00:21:59,389 | INFO     | stage-out finished correctly
[2025-10-12 02:22:38] 2025-10-12 00:21:59,453 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 02:22:38] 2025-10-12 00:21:59,737 | INFO     | monitor loop #303: job 0:6838631691 is in state 'finished'
[2025-10-12 02:22:38] 2025-10-12 00:21:59,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:22:38] 2025-10-12 00:22:00,782 | INFO     | job 6838631691 has state=finished
[2025-10-12 02:22:38] 2025-10-12 00:22:00,782 | INFO     | preparing for final server update for job 6838631691 in state='finished'
[2025-10-12 02:22:38] 2025-10-12 00:22:00,782 | INFO     | this job has now completed (state=finished)
[2025-10-12 02:22:38] 2025-10-12 00:22:00,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 02:22:38] 2025-10-12 00:22:00,782 | INFO     | log transfer has been attempted: DONE
[2025-10-12 02:22:38] 2025-10-12 00:22:00,782 | INFO     | job 6838631691 has finished - writing final server update
[2025-10-12 02:22:38] 2025-10-12 00:22:00,783 | INFO     | total number of processed events: 400 (read)
[2025-10-12 02:22:38] 2025-10-12 00:22:00,784 | INFO     | executing command: lscpu
[2025-10-12 02:22:38] 2025-10-12 00:22:00,802 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 02:22:38] 2025-10-12 00:22:01,172 | INFO     | time since job start (4121s) is within the limit (172800.0s)
[2025-10-12 02:22:38] 2025-10-12 00:22:02,240 | INFO     | monitor loop #304: job 0:6838631691 is in state 'finished'
[2025-10-12 02:22:38] 2025-10-12 00:22:02,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:22:38] 2025-10-12 00:22:02,283 | INFO     | PID=2996782 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 02:22:38] 2025-10-12 00:22:03,283 | INFO     | time since job start (4123s) is within the limit (172800.0s)
[2025-10-12 02:22:38] 2025-10-12 00:22:04,743 | INFO     | monitor loop #305: job 0:6838631691 is in state 'finished'
[2025-10-12 02:22:38] 2025-10-12 00:22:04,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:22:38] 2025-10-12 00:22:05,289 | INFO     | time since job start (4125s) is within the limit (172800.0s)
[2025-10-12 02:22:38] 2025-10-12 00:22:05,595 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 02:22:38] 2025-10-12 00:22:05,597 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2411.227
[2025-10-12 02:22:38] 2025-10-12 00:22:05,598 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6838631691/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 02:22:38] 2025-10-12 00:22:05,599 | INFO     | extracted standard info from prmon json
[2025-10-12 02:22:38] 2025-10-12 00:22:05,599 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 02:22:38] 2025-10-12 00:22:05,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 02:22:38] 2025-10-12 00:22:05,599 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 02:22:38] 2025-10-12 00:22:05,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:22:38] 2025-10-12 00:22:05,601 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:22:38] 2025-10-12 00:22:05,601 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 02:22:38] 2025-10-12 00:22:05,601 | INFO     | sum of deviations: -3287110843.0
[2025-10-12 02:22:38] 2025-10-12 00:22:05,601 | INFO     | mean x: 1760226559.0
[2025-10-12 02:22:38] 2025-10-12 00:22:05,602 | INFO     | mean y: 3098231.770491803
[2025-10-12 02:22:38] 2025-10-12 00:22:05,602 | INFO     | -- intersect: 82233368865.8406
[2025-10-12 02:22:38] 2025-10-12 00:22:05,602 | INFO     | intersect: 82233368865.8406
[2025-10-12 02:22:38] 2025-10-12 00:22:05,602 | INFO     | chi2: 0.12399183485775561
[2025-10-12 02:22:38] 2025-10-12 00:22:05,602 | INFO     | -- intersect: 82233368865.8406
[2025-10-12 02:22:38] 2025-10-12 00:22:05,602 | INFO     | current memory leak: -46.72 B/s (using 61 data points, chi2=0.12)
[2025-10-12 02:22:38] 2025-10-12 00:22:05,602 | INFO     | could have reported an average CPU frequency of 2644 MHz (6 samples)
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | ..............................
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | . Timing measurements:
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | . get job = 0 s
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | . initial setup = 1 s
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | . payload setup = 6 s
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | . stage-in = 0 s
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | . payload execution = 4094 s
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | . stage-out = 0 s
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | . log creation = 0 s
[2025-10-12 02:22:38] 2025-10-12 00:22:05,603 | INFO     | ..............................
[2025-10-12 02:22:38] 2025-10-12 00:22:05,672 | INFO     | 
[2025-10-12 02:22:38] 2025-10-12 00:22:05,672 | INFO     | job summary report
[2025-10-12 02:22:38] 2025-10-12 00:22:05,672 | INFO     | --------------------------------------------------
[2025-10-12 02:22:38] 2025-10-12 00:22:05,672 | INFO     | PanDA job id: 6838631691
[2025-10-12 02:22:38] 2025-10-12 00:22:05,672 | INFO     | task id: 46676269
[2025-10-12 02:22:38] 2025-10-12 00:22:05,672 | INFO     | errors: (none)
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | pilot state: finished 
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | transexitcode: 0
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | exeerrorcode: 0
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | exeerrordiag: 
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | exitcode: 0
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | exitmsg: OK
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | cpuconsumptiontime: 43394 s
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | nevents: 400
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | neventsw: 0
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | pid: 3004127
[2025-10-12 02:22:38] 2025-10-12 00:22:05,673 | INFO     | pgrp: 3004127
[2025-10-12 02:22:38] 2025-10-12 00:22:05,674 | INFO     | corecount: 12
[2025-10-12 02:22:38] 2025-10-12 00:22:05,674 | INFO     | event service: False
[2025-10-12 02:22:38] 2025-10-12 00:22:05,674 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 11: 2349175, 4104: 2375122, 4105: 2384304, 4111: 2384442}
[2025-10-12 02:22:38] 2025-10-12 00:22:05,674 | INFO     | --------------------------------------------------
[2025-10-12 02:22:38] 2025-10-12 00:22:05,674 | INFO     | 
[2025-10-12 02:22:38] 2025-10-12 00:22:05,674 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-12 02:22:38] 2025-10-12 00:22:05,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:22:38] 2025-10-12 00:22:05,694 | INFO     | job 6838631691 has completed (purged errors)
[2025-10-12 02:22:38] 2025-10-12 00:22:05,695 | INFO     | overall cleanup function is called
[2025-10-12 02:22:38] 2025-10-12 00:22:06,701 | INFO     | --- collectZombieJob: --- 10, [3004127]
[2025-10-12 02:22:38] 2025-10-12 00:22:06,702 | INFO     | zombie collector waiting for pid 3004127
[2025-10-12 02:22:38] 2025-10-12 00:22:06,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:22:38] 2025-10-12 00:22:06,702 | INFO     | collected zombie processes
[2025-10-12 02:22:38] 2025-10-12 00:22:06,702 | INFO     | will attempt to kill all subprocesses of pid=3004127
[2025-10-12 02:22:38] 2025-10-12 00:22:06,780 | INFO     | process IDs to be killed: [3004127] (in reverse order)
[2025-10-12 02:22:38] 2025-10-12 00:22:06,819 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:22:38] 2025-10-12 00:22:06,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:22:38] 2025-10-12 00:22:06,821 | INFO     | did not find any defunct processes belonging to 3004127
[2025-10-12 02:22:38] 2025-10-12 00:22:06,823 | INFO     | did not find any defunct processes belonging to 3004127
[2025-10-12 02:22:38] 2025-10-12 00:22:06,824 | INFO     | ready for new job
[2025-10-12 02:22:38] 2025-10-12 00:22:06,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:22:38] 2025-10-12 00:22:06,825 | INFO     | ***************************************
[2025-10-12 02:22:38] 2025-10-12 00:22:06,825 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:22:38] 2025-10-12 00:22:06,825 | INFO     | ***************************************
[2025-10-12 02:22:38] 2025-10-12 00:22:06,825 | INFO     | 
[2025-10-12 02:22:38] 2025-10-12 00:22:06,826 | INFO     | architecture information:
[2025-10-12 02:22:38] 2025-10-12 00:22:06,826 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:22:38] 2025-10-12 00:22:06,838 | INFO     | cat /etc/os-release:
[2025-10-12 02:22:38] NAME="CentOS Linux"
[2025-10-12 02:22:38] VERSION="7 (Core)"
[2025-10-12 02:22:38] ID="centos"
[2025-10-12 02:22:38] ID_LIKE="rhel fedora"
[2025-10-12 02:22:38] VERSION_ID="7"
[2025-10-12 02:22:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:22:38] ANSI_COLOR="0;31"
[2025-10-12 02:22:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:22:38] HOME_URL="https://www.centos.org/"
[2025-10-12 02:22:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:22:38] 
[2025-10-12 02:22:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:22:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:22:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:22:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:22:38] 
[2025-10-12 02:22:38] 2025-10-12 00:22:06,838 | INFO     | ***************************************
[2025-10-12 02:22:38] 2025-10-12 00:22:07,341 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-12 02:22:38] 2025-10-12 00:22:07,354 | INFO     | sufficient remaining disk space (1817808207872 B)
[2025-10-12 02:22:38] 2025-10-12 00:22:07,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:22:38] 2025-10-12 00:22:07,354 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:22:38] 2025-10-12 00:22:07,354 | INFO     | update_server=False
[2025-10-12 02:22:38] 2025-10-12 00:22:07,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:22:38] 2025-10-12 00:22:07,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:22:38] 2025-10-12 00:22:07,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:22:38] 2025-10-12 00:22:07,736 | INFO     | all payload control threads have been joined
[2025-10-12 02:22:38] 2025-10-12 00:22:07,861 | INFO     | all data control threads have been joined
[2025-10-12 02:22:38] 2025-10-12 00:22:08,143 | INFO     | all job control threads have been joined
[2025-10-12 02:22:38] 2025-10-12 00:22:08,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:22:38] 2025-10-12 00:22:08,251 | INFO     | aborting loop
[2025-10-12 02:22:38] 2025-10-12 00:22:08,357 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:08,359 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:08,628 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:08,634 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:08,741 | INFO     | [payload] control thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:08,866 | INFO     | [data] control thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:09,148 | INFO     | [job] control thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:09,178 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:09,257 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:09,408 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:09,468 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:09,770 | INFO     | [job] validate thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:09,837 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:09,851 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:10,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:22:38] 2025-10-12 00:22:14,028 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:18,137 | INFO     | job.realtimelogging is not enabled
[2025-10-12 02:22:38] 2025-10-12 00:22:19,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:22:38] 2025-10-12 00:22:26,439 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:22:38] 2025-10-12 00:22:28,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236505327424)>', '<ExcThread(monitor, started 140235941848832)>']
[2025-10-12 02:22:38] 2025-10-12 00:22:33,087 | INFO     | all workflow threads have been joined
[2025-10-12 02:22:38] 2025-10-12 00:22:33,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:22:38] 2025-10-12 00:22:33,087 | INFO     | traces error code: 0
[2025-10-12 02:22:38] 2025-10-12 00:22:33,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:22:38] 2025-10-12 00:22:38,475 | INFO     | PID=2996782 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 02:22:38] 2025-10-12 00:22:38,476 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:22:38] 2025-10-12 00:22:38,476 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:22:38] 2025-10-12 00:22:38,476 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:22:38] 2025-10-12 00:22:38,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:22:38] 2025-10-12 00:22:38,476 | INFO     | [monitor] control thread has ended
[2025-10-12 02:22:38] 2025-10-12 00:22:38,556 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:22:38] 2025-10-12 00:22:38,559 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:22:38] 2025-10-12 00:22:38,562 [wrapper] pilotpid: 2996782
[2025-10-12 02:22:38] 2025-10-12 00:22:38,564 [wrapper] Pilot exit status: 0
[2025-10-12 02:22:38] 2025-10-12 00:22:38,571 [wrapper] pandaids: 6838631691
[2025-10-12 02:22:38] 2025-10-12 00:22:38,592 [wrapper] cleanup supervisor_pilot 3017552 2996783
[2025-10-12 02:22:38] 2025-10-12 00:22:38,594 [wrapper] Test setup, not cleaning
[2025-10-12 02:22:38] 2025-10-12 00:22:38,596 [wrapper] apfmon messages muted
[2025-10-12 02:22:38] 2025-10-12 00:22:38,598 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:22:38] 2025-10-12 00:22:38,601 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:22:38]  *** Error codes and diagnostics ***
[2025-10-12 02:22:38]     "exeErrorCode": 0,
[2025-10-12 02:22:38]     "exeErrorDiag": "",
[2025-10-12 02:22:38]     "pilotErrorCode": 0,
[2025-10-12 02:22:38]     "pilotErrorDiag": "",
[2025-10-12 02:22:38]  *** Listing of results directory ***
[2025-10-12 02:22:38] total 405092
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:50 pilot3.tar.gz
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:02 queuedata.json
[2025-10-12 02:22:38] -rwx------ 1 boinc boinc     36292 Oct 11 18:04 runpilot2-wrapper.sh
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc       100 Oct 12 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:22:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 01:13 run_atlas
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc       105 Oct 12 01:13 job.xml
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc      6294 Oct 12 01:13 init_data.xml
[2025-10-12 02:22:38] -rw-r--r-- 2 boinc boinc 220370500 Oct 12 01:13 EVNT.46676267._002428.pool.root.1
[2025-10-12 02:22:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 01:13 start_atlas.sh
[2025-10-12 02:22:38] drwxrwx--x 2 boinc boinc        68 Oct 12 01:13 shared
[2025-10-12 02:22:38] -rw-r--r-- 2 boinc boinc    569681 Oct 12 01:13 input.tar.gz
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 01:13 boinc_lockfile
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc      2550 Oct 12 01:13 pandaJob.out
[2025-10-12 02:22:38] -rw------- 1 boinc boinc    975528 Oct 12 01:13 agis_schedconf.cvmfs.json
[2025-10-12 02:22:38] -rw------- 1 boinc boinc   1560580 Oct 12 01:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:22:38] drwx------ 5 boinc boinc      4096 Oct 12 01:13 pilot3
[2025-10-12 02:22:38] -rw------- 1 boinc boinc 188571183 Oct 12 02:21 HITS.46676269._060496.pool.root.1
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc       530 Oct 12 02:21 boinc_task_state.xml
[2025-10-12 02:22:38] -rw------- 1 boinc boinc      1014 Oct 12 02:21 memory_monitor_summary.json
[2025-10-12 02:22:38] -rw------- 1 boinc boinc    392555 Oct 12 02:21 log.46676269._060496.job.log.tgz.1
[2025-10-12 02:22:38] -rw------- 1 boinc boinc      7781 Oct 12 02:22 heartbeat.json
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc        27 Oct 12 02:22 wrapper_checkpoint.txt
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc      8192 Oct 12 02:22 boinc_mmap_file
[2025-10-12 02:22:38] -rw------- 1 boinc boinc       747 Oct 12 02:22 pilotlog.txt
[2025-10-12 02:22:38] -rw------- 1 boinc boinc        95 Oct 12 02:22 pilot_heartbeat.json
[2025-10-12 02:22:38] -rw------- 1 boinc boinc    601210 Oct 12 02:22 log.46676269._060496.job.log.1
[2025-10-12 02:22:38] -rw------- 1 boinc boinc       357 Oct 12 02:22 output.list
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc       620 Oct 12 02:22 runtime_log
[2025-10-12 02:22:38] -rw------- 1 boinc boinc   1013760 Oct 12 02:22 result.tar.gz
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc      8727 Oct 12 02:22 runtime_log.err
[2025-10-12 02:22:38] -rw------- 1 boinc boinc       656 Oct 12 02:22 LkXKDmpFrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjqgNDmahgkAn.diag
[2025-10-12 02:22:38] -rw-r--r-- 1 boinc boinc     22022 Oct 12 02:22 stderr.txt
[2025-10-12 02:22:38] HITS file was successfully produced:
[2025-10-12 02:22:38] -rw------- 1 boinc boinc 188571183 Oct 12 02:21 shared/HITS.pool.root.1
[2025-10-12 02:22:38]  *** Contents of shared directory: ***
[2025-10-12 02:22:38] total 400928
[2025-10-12 02:22:38] -rw-r--r-- 2 boinc boinc 220370500 Oct 12 01:13 ATLAS.root_0
[2025-10-12 02:22:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 01:13 start_atlas.sh
[2025-10-12 02:22:38] -rw-r--r-- 2 boinc boinc    569681 Oct 12 01:13 input.tar.gz
[2025-10-12 02:22:38] -rw------- 1 boinc boinc 188571183 Oct 12 02:21 HITS.pool.root.1
[2025-10-12 02:22:38] -rw------- 1 boinc boinc   1013760 Oct 12 02:22 result.tar.gz
02:22:39 (2993005): run_atlas exited; CPU time 43406.966123
02:22:39 (2993005): called boinc_finish(0)

</stderr_txt>
]]>

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