Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:20:59 (2691862): wrapper (7.7.26015): starting
13:20:59 (2691862): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 13:20:59] Arguments: --nthreads 3
[2025-10-12 13:20:59] Threads: 3
[2025-10-12 13:20:59] Checking for CVMFS
[2025-10-12 13:20:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:20:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:20:59] 2.9.2.0 1215301 4297 85736 151619 2 56 3615101 36864000 0 130560 0 3349433 99.991 145564 806 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 13:20:59] CVMFS is ok
[2025-10-12 13:20:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:20:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:20:59] Further information can be found at the LHC@home message board.
[2025-10-12 13:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:20:59] Checking for apptainer binary...
[2025-10-12 13:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:20:59] Running /usr/bin/apptainer --version
[2025-10-12 13:20:59] apptainer version 1.4.1-1.1
[2025-10-12 13:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:20:59] cosA127
[2025-10-12 13:20:59] apptainer works
[2025-10-12 13:20:59] Set ATHENA_PROC_NUMBER=3
[2025-10-12 13:20:59] Set ATHENA_CORE_NUMBER=3
[2025-10-12 13:20:59] Starting ATLAS job with PandaID=6838604478
[2025-10-12 13:20:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:48:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:48:18]  lfn=log.46676269._060253.job.log.tgz.1
[2025-10-12 14:48:18]  mtime=0
[2025-10-12 14:48:18]  protocol_id=None
[2025-10-12 14:48:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 14:48:18]  replicas=None
[2025-10-12 14:48:18]  scope=mc23_13p6TeV
[2025-10-12 14:48:18]  status=None
[2025-10-12 14:48:18]  status_code=0
[2025-10-12 14:48:18]  storage_token=
[2025-10-12 14:48:18]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6838604478/log.46676269._060253.job.log.tgz.1
[2025-10-12 14:48:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/5c/log.46676269._060253.job.log.tgz.1
[2025-10-12 14:48:18]  workdir=None
[2025-10-12 14:48:18] ]
[2025-10-12 14:48:18] 2025-10-12 12:47:12,032 | INFO     | transferring file log.46676269._060253.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838604478/log.46676269._060253.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 14:48:18] 2025-10-12 12:47:12,032 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838604478/log.46676269._060253.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0602
[2025-10-12 14:48:18] 2025-10-12 12:47:12,045 | INFO     | adding to output.list: log.46676269._060253.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/5c/log.46676269._060253.job.log.tg
[2025-10-12 14:48:18] 2025-10-12 12:47:12,045 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 14:48:18] 2025-10-12 12:47:12,045 | INFO     | summary of transferred files:
[2025-10-12 14:48:18] 2025-10-12 12:47:12,045 | INFO     |  -- lfn=log.46676269._060253.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 14:48:18] 2025-10-12 12:47:12,045 | INFO     | stage-out finished correctly
[2025-10-12 14:48:18] 2025-10-12 12:47:12,076 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:48:18] 2025-10-12 12:47:13,185 | INFO     | time since job start (5168s) is within the limit (172800.0s)
[2025-10-12 14:48:18] 2025-10-12 12:47:13,976 | INFO     | job 6838604478 has state=finished
[2025-10-12 14:48:18] 2025-10-12 12:47:13,976 | INFO     | preparing for final server update for job 6838604478 in state='finished'
[2025-10-12 14:48:18] 2025-10-12 12:47:13,977 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:48:18] 2025-10-12 12:47:13,977 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:48:18] 2025-10-12 12:47:13,977 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:48:18] 2025-10-12 12:47:13,977 | INFO     | job 6838604478 has finished - writing final server update
[2025-10-12 14:48:18] 2025-10-12 12:47:13,977 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:48:18] 2025-10-12 12:47:13,978 | INFO     | executing command: lscpu
[2025-10-12 14:48:18] 2025-10-12 12:47:13,993 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:48:18] 2025-10-12 12:47:14,260 | INFO     | monitor loop #397: job 0:6838604478 is in state 'finished'
[2025-10-12 14:48:18] 2025-10-12 12:47:14,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:48:18] 2025-10-12 12:47:15,190 | INFO     | time since job start (5170s) is within the limit (172800.0s)
[2025-10-12 14:48:18] 2025-10-12 12:47:16,763 | INFO     | monitor loop #398: job 0:6838604478 is in state 'finished'
[2025-10-12 14:48:18] 2025-10-12 12:47:16,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:48:18] 2025-10-12 12:47:17,195 | INFO     | time since job start (5172s) is within the limit (172800.0s)
[2025-10-12 14:48:18] 2025-10-12 12:47:18,194 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 14:48:18] 2025-10-12 12:47:18,195 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3640.3290833333326
[2025-10-12 14:48:18] 2025-10-12 12:47:18,196 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838604478/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:48:18] 2025-10-12 12:47:18,196 | INFO     | extracted standard info from prmon json
[2025-10-12 14:48:18] 2025-10-12 12:47:18,196 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:48:18] 2025-10-12 12:47:18,196 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:48:18] 2025-10-12 12:47:18,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:48:18] 2025-10-12 12:47:18,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:48:18] 2025-10-12 12:47:18,197 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:48:18] 2025-10-12 12:47:18,197 | INFO     | sum of square deviations: 147126479.5
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | sum of deviations: -17488196902.5
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | mean x: 1760270737.5
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | mean y: 2596411.9615384615
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | -- intersect: 209237272343.3522
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | intersect: 209237272343.3522
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | chi2: 0.15411183468025486
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | -- intersect: 209237272343.3522
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | current memory leak: -118.87 B/s (using 78 data points, chi2=0.15)
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | could have reported an average CPU frequency of 3812 MHz (6 samples)
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | ..............................
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | . Timing measurements:
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | . get job = 0 s
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | . initial setup = 1 s
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | . payload setup = 2 s
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | . stage-in = 0 s
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | . payload execution = 5146 s
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | . stage-out = 0 s
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | . log creation = 0 s
[2025-10-12 14:48:18] 2025-10-12 12:47:18,198 | INFO     | ..............................
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | 
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | job summary report
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | --------------------------------------------------
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | PanDA job id: 6838604478
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | task id: 46676269
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | errors: (none)
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | pilot state: finished 
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | transexitcode: 0
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | exeerrorcode: 0
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | exeerrordiag: 
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | exitcode: 0
[2025-10-12 14:48:18] 2025-10-12 12:47:18,688 | INFO     | exitmsg: OK
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | cpuconsumptiontime: 14849 s
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | nevents: 400
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | neventsw: 0
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | pid: 2702035
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | pgrp: 2702035
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | corecount: 3
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | event service: False
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | sizes: {0: 2348858, 2: 2349120, 11: 2349148, 5152: 2375740, 5153: 2384800, 5160: 2384938}
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | --------------------------------------------------
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | 
[2025-10-12 14:48:18] 2025-10-12 12:47:18,689 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:48:18] 2025-10-12 12:47:18,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,705 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:48:18] 2025-10-12 12:47:18,705 | INFO     | job 6838604478 has completed (purged errors)
[2025-10-12 14:48:18] 2025-10-12 12:47:18,705 | INFO     | overall cleanup function is called
[2025-10-12 14:48:18] 2025-10-12 12:47:19,710 | INFO     | --- collectZombieJob: --- 10, [2702035]
[2025-10-12 14:48:18] 2025-10-12 12:47:19,710 | INFO     | zombie collector waiting for pid 2702035
[2025-10-12 14:48:18] 2025-10-12 12:47:19,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:48:18] 2025-10-12 12:47:19,710 | INFO     | collected zombie processes
[2025-10-12 14:48:18] 2025-10-12 12:47:19,710 | INFO     | will attempt to kill all subprocesses of pid=2702035
[2025-10-12 14:48:18] 2025-10-12 12:47:19,767 | INFO     | process IDs to be killed: [2702035] (in reverse order)
[2025-10-12 14:48:18] 2025-10-12 12:47:19,794 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:48:18] 2025-10-12 12:47:19,795 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:48:18] 2025-10-12 12:47:19,796 | INFO     | did not find any defunct processes belonging to 2702035
[2025-10-12 14:48:18] 2025-10-12 12:47:19,798 | INFO     | did not find any defunct processes belonging to 2702035
[2025-10-12 14:48:18] 2025-10-12 12:47:19,798 | INFO     | ready for new job
[2025-10-12 14:48:18] 2025-10-12 12:47:19,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:48:18] 2025-10-12 12:47:19,799 | INFO     | ***************************************
[2025-10-12 14:48:18] 2025-10-12 12:47:19,799 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:48:18] 2025-10-12 12:47:19,799 | INFO     | ***************************************
[2025-10-12 14:48:18] 2025-10-12 12:47:19,799 | INFO     | 
[2025-10-12 14:48:18] 2025-10-12 12:47:19,799 | INFO     | architecture information:
[2025-10-12 14:48:18] 2025-10-12 12:47:19,799 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:48:18] 2025-10-12 12:47:19,808 | INFO     | cat /etc/os-release:
[2025-10-12 14:48:18] NAME="CentOS Linux"
[2025-10-12 14:48:18] VERSION="7 (Core)"
[2025-10-12 14:48:18] ID="centos"
[2025-10-12 14:48:18] ID_LIKE="rhel fedora"
[2025-10-12 14:48:18] VERSION_ID="7"
[2025-10-12 14:48:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:48:18] ANSI_COLOR="0;31"
[2025-10-12 14:48:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:48:18] HOME_URL="https://www.centos.org/"
[2025-10-12 14:48:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:48:18] 
[2025-10-12 14:48:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:48:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:48:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:48:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:48:18] 
[2025-10-12 14:48:18] 2025-10-12 12:47:19,808 | INFO     | ***************************************
[2025-10-12 14:48:18] 2025-10-12 12:47:20,311 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 14:48:18] 2025-10-12 12:47:20,324 | INFO     | sufficient remaining disk space (356197072896 B)
[2025-10-12 14:48:18] 2025-10-12 12:47:20,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:48:18] 2025-10-12 12:47:20,324 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:48:18] 2025-10-12 12:47:20,324 | INFO     | update_server=False
[2025-10-12 14:48:18] 2025-10-12 12:47:20,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:48:18] 2025-10-12 12:47:20,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:48:18] 2025-10-12 12:47:20,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:48:18] 2025-10-12 12:47:20,325 | INFO     | aborting loop
[2025-10-12 14:48:18] 2025-10-12 12:47:20,674 | INFO     | all data control threads have been joined
[2025-10-12 14:48:18] 2025-10-12 12:47:21,068 | INFO     | all payload control threads have been joined
[2025-10-12 14:48:18] 2025-10-12 12:47:21,086 | INFO     | all job control threads have been joined
[2025-10-12 14:48:18] 2025-10-12 12:47:21,329 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:21,330 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:21,680 | INFO     | [data] control thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,073 | INFO     | [payload] control thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,086 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,092 | INFO     | [job] control thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,094 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,240 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,324 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,330 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:48:18] 2025-10-12 12:47:22,732 | INFO     | [job] validate thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,749 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,825 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:22,826 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:23,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:48:18] 2025-10-12 12:47:24,241 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:26,620 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:48:18] 2025-10-12 12:47:50,311 | INFO     | PID=2695584 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:48:18] 2025-10-12 12:47:50,312 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:48:18] 2025-10-12 12:47:50,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:48:18] 2025-10-12 12:47:50,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:48:18] 2025-10-12 12:48:10,968 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:48:18] 2025-10-12 12:48:13,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492026570560)>', '<ExcThread(monitor, started 140491746150144)>']
[2025-10-12 14:48:18] 2025-10-12 12:48:13,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:48:18] 2025-10-12 12:48:13,431 | INFO     | [monitor] control thread has ended
[2025-10-12 14:48:18] 2025-10-12 12:48:18,036 | INFO     | all workflow threads have been joined
[2025-10-12 14:48:18] 2025-10-12 12:48:18,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:48:18] 2025-10-12 12:48:18,037 | INFO     | traces error code: 0
[2025-10-12 14:48:18] 2025-10-12 12:48:18,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:48:18] 2025-10-12 12:48:18,087 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:48:18] 2025-10-12 12:48:18,090 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:48:18] 2025-10-12 12:48:18,092 [wrapper] pilotpid: 2695584
[2025-10-12 14:48:18] 2025-10-12 12:48:18,094 [wrapper] Pilot exit status: 0
[2025-10-12 14:48:18] 2025-10-12 12:48:18,101 [wrapper] pandaids: 6838604478
[2025-10-12 14:48:18] 2025-10-12 12:48:18,121 [wrapper] cleanup supervisor_pilot 2717923 2695585
[2025-10-12 14:48:18] 2025-10-12 12:48:18,123 [wrapper] Test setup, not cleaning
[2025-10-12 14:48:18] 2025-10-12 12:48:18,125 [wrapper] apfmon messages muted
[2025-10-12 14:48:18] 2025-10-12 12:48:18,128 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:48:18] 2025-10-12 12:48:18,130 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:48:18]  *** Error codes and diagnostics ***
[2025-10-12 14:48:18]     "exeErrorCode": 0,
[2025-10-12 14:48:18]     "exeErrorDiag": "",
[2025-10-12 14:48:18]     "pilotErrorCode": 0,
[2025-10-12 14:48:18]     "pilotErrorDiag": "",
[2025-10-12 14:48:18]  *** Listing of results directory ***
[2025-10-12 14:48:18] total 413456
[2025-10-12 14:48:18] -rwx------ 1 boinc boinc     36292 Oct 11 17:42 runpilot2-wrapper.sh
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:42 pilot3.tar.gz
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:42 queuedata.json
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc       100 Oct 12 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:48:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 13:20 run_atlas
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc       105 Oct 12 13:20 job.xml
[2025-10-12 14:48:18] -rw-r--r-- 2 boinc boinc 220395163 Oct 12 13:20 EVNT.46676267._002420.pool.root.1
[2025-10-12 14:48:18] -rw-r--r-- 2 boinc boinc    569670 Oct 12 13:20 input.tar.gz
[2025-10-12 14:48:18] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:20 start_atlas.sh
[2025-10-12 14:48:18] drwxrwx--x 2 boinc boinc      4096 Oct 12 13:20 shared
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:20 boinc_setup_complete
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc      6437 Oct 12 13:20 init_data.xml
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:20 boinc_lockfile
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc      2549 Oct 12 13:20 pandaJob.out
[2025-10-12 14:48:18] -rw------- 1 boinc boinc    975520 Oct 12 13:21 agis_schedconf.cvmfs.json
[2025-10-12 14:48:18] -rw------- 1 boinc boinc   1560580 Oct 12 13:21 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:48:18] drwx------ 5 boinc boinc      4096 Oct 12 13:21 pilot3
[2025-10-12 14:48:18] -rw------- 1 boinc boinc 197085941 Oct 12 14:46 HITS.46676269._060253.pool.root.1
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc       529 Oct 12 14:46 boinc_task_state.xml
[2025-10-12 14:48:18] -rw------- 1 boinc boinc      1020 Oct 12 14:47 memory_monitor_summary.json
[2025-10-12 14:48:18] -rw------- 1 boinc boinc    242231 Oct 12 14:47 log.46676269._060253.job.log.tgz.1
[2025-10-12 14:48:18] -rw------- 1 boinc boinc      7769 Oct 12 14:47 heartbeat.json
[2025-10-12 14:48:18] -rw------- 1 boinc boinc        95 Oct 12 14:47 pilot_heartbeat.json
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:48 boinc_mmap_file
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:48 wrapper_checkpoint.txt
[2025-10-12 14:48:18] -rw------- 1 boinc boinc      4752 Oct 12 14:48 pilotlog.txt
[2025-10-12 14:48:18] -rw------- 1 boinc boinc    757122 Oct 12 14:48 log.46676269._060253.job.log.1
[2025-10-12 14:48:18] -rw------- 1 boinc boinc       357 Oct 12 14:48 output.list
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:48 runtime_log
[2025-10-12 14:48:18] -rw------- 1 boinc boinc   1013760 Oct 12 14:48 result.tar.gz
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc      8782 Oct 12 14:48 runtime_log.err
[2025-10-12 14:48:18] -rw------- 1 boinc boinc       659 Oct 12 14:48 GYQODm8uqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxngNDmqHLKon.diag
[2025-10-12 14:48:18] -rw-r--r-- 1 boinc boinc     21623 Oct 12 14:48 stderr.txt
[2025-10-12 14:48:18] HITS file was successfully produced:
[2025-10-12 14:48:18] -rw------- 1 boinc boinc 197085941 Oct 12 14:46 shared/HITS.pool.root.1
[2025-10-12 14:48:18]  *** Contents of shared directory: ***
[2025-10-12 14:48:18] total 409272
[2025-10-12 14:48:18] -rw-r--r-- 2 boinc boinc 220395163 Oct 12 13:20 ATLAS.root_0
[2025-10-12 14:48:18] -rw-r--r-- 2 boinc boinc    569670 Oct 12 13:20 input.tar.gz
[2025-10-12 14:48:18] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:20 start_atlas.sh
[2025-10-12 14:48:18] -rw------- 1 boinc boinc 197085941 Oct 12 14:46 HITS.pool.root.1
[2025-10-12 14:48:18] -rw------- 1 boinc boinc   1013760 Oct 12 14:48 result.tar.gz
14:48:19 (2691862): run_atlas exited; CPU time 14873.879212
14:48:19 (2691862): called boinc_finish(0)

</stderr_txt>
]]>

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