Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:42:50 (650724): wrapper (7.7.26015): starting
16:42:50 (650724): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:42:50] Arguments: --nthreads 8
[2025-10-11 16:42:50] Threads: 8
[2025-10-11 16:42:50] Checking for CVMFS
[2025-10-11 16:42:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:42:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:42:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:42:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:42:53] 2.13.2.0 558603 128317 504252 151595 0 588 32190446 32935936 45524 16776704 0 246497433 99.609 245209774 19981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 16:42:53] CVMFS is ok
[2025-10-11 16:42:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:42:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:42:53] Further information can be found at the LHC@home message board.
[2025-10-11 16:42:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:42:53] Checking for apptainer binary...
[2025-10-11 16:42:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:42:53] Running /usr/bin/apptainer --version
[2025-10-11 16:42:53] apptainer version 1.4.3-1.el9
[2025-10-11 16:42:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:42:53] c6-6-8-3.aglt2.org
[2025-10-11 16:42:53] apptainer works
[2025-10-11 16:42:53] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:42:53] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:42:54] Starting ATLAS job with PandaID=6838775182
[2025-10-11 16:42:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:52:30]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:52:30] 2025-10-12 00:51:34,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:52:30] 2025-10-12 00:51:34,931 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:52:30] 2025-10-12 00:51:34,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:52:30] 2025-10-12 00:51:34,944 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:52:30] 2025-10-12 00:51:34,945 | INFO     | sum of square deviations: 4340128110.124506
[2025-10-11 20:52:30] 2025-10-12 00:51:34,952 | INFO     | sum of deviations: 43181300439.63901
[2025-10-11 20:52:30] 2025-10-12 00:51:34,952 | INFO     | mean x: 1760222903.5228217
[2025-10-11 20:52:30] 2025-10-12 00:51:34,952 | INFO     | mean y: 2085999.8838174273
[2025-10-11 20:52:30] 2025-10-12 00:51:34,952 | INFO     | -- intersect: -17510925623.077744
[2025-10-11 20:52:30] 2025-10-12 00:51:34,952 | INFO     | intersect: -17510925623.077744
[2025-10-11 20:52:30] 2025-10-12 00:51:34,953 | INFO     | chi2: 4.491543962068496
[2025-10-11 20:52:30] 2025-10-12 00:51:34,955 | INFO     | sum of square deviations: 4075584833.7288294
[2025-10-11 20:52:30] 2025-10-12 00:51:34,960 | INFO     | sum of deviations: 69108701087.4746
[2025-10-11 20:52:30] 2025-10-12 00:51:34,960 | INFO     | mean x: 1760222751.0338984
[2025-10-11 20:52:30] 2025-10-12 00:51:34,961 | INFO     | mean y: 2100746.690677966
[2025-10-11 20:52:30] 2025-10-12 00:51:34,961 | INFO     | -- intersect: -29845568461.872215
[2025-10-11 20:52:30] 2025-10-12 00:51:34,961 | INFO     | intersect: -29845568461.872215
[2025-10-11 20:52:30] 2025-10-12 00:51:34,961 | INFO     | chi2: 2.913252003489527
[2025-10-11 20:52:30] 2025-10-12 00:51:34,961 | INFO     | current chi2=2.913252003489527 (change=35.13918536493888 %)
[2025-10-11 20:52:30] 2025-10-12 00:51:34,962 | INFO     | sum of square deviations: 3822004233.3593006
[2025-10-11 20:52:30] 2025-10-12 00:51:34,968 | INFO     | sum of deviations: 66960245659.46328
[2025-10-11 20:52:30] 2025-10-12 00:51:34,968 | INFO     | mean x: 1760222598.5411255
[2025-10-11 20:52:30] 2025-10-12 00:51:34,968 | INFO     | mean y: 2099452.3722943724
[2025-10-11 20:52:30] 2025-10-12 00:51:34,969 | INFO     | -- intersect: -30836416262.73374
[2025-10-11 20:52:30] 2025-10-12 00:51:34,969 | INFO     | intersect: -30836416262.73374
[2025-10-11 20:52:30] 2025-10-12 00:51:34,969 | INFO     | chi2: 2.9136097911638523
[2025-10-11 20:52:30] 2025-10-12 00:51:34,969 | INFO     | current chi2=2.9136097911638523 (change=-0.012281384305131189 %)
[2025-10-11 20:52:30] 2025-10-12 00:51:34,969 | INFO     | right removable region: 230
[2025-10-11 20:52:30] 2025-10-12 00:51:34,970 | INFO     | sum of square deviations: 4075507973.7288294
[2025-10-11 20:52:30] 2025-10-12 00:51:34,975 | INFO     | sum of deviations: -4495053145.203394
[2025-10-11 20:52:30] 2025-10-12 00:51:34,975 | INFO     | mean x: 1760223056.0338984
[2025-10-11 20:52:30] 2025-10-12 00:51:34,975 | INFO     | mean y: 2113353.525423729
[2025-10-11 20:52:30] 2025-10-12 00:51:34,975 | INFO     | -- intersect: 1943539118.1879473
[2025-10-11 20:52:30] 2025-10-12 00:51:34,976 | INFO     | intersect: 1943539118.1879473
[2025-10-11 20:52:30] 2025-10-12 00:51:34,976 | INFO     | chi2: 2.2031323262372773
[2025-10-11 20:52:30] 2025-10-12 00:51:34,976 | INFO     | current chi2=2.2031323262372773 (change=50.94933179229829 %)
[2025-10-11 20:52:30] 2025-10-12 00:51:34,977 | INFO     | sum of square deviations: 3821907853.5064745
[2025-10-11 20:52:30] 2025-10-12 00:51:34,982 | INFO     | sum of deviations: -24142386356.090908
[2025-10-11 20:52:30] 2025-10-12 00:51:34,983 | INFO     | mean x: 1760223208.5324676
[2025-10-11 20:52:30] 2025-10-12 00:51:34,983 | INFO     | mean y: 2125130.878787879
[2025-10-11 20:52:30] 2025-10-12 00:51:34,983 | INFO     | -- intersect: 11121176244.149385
[2025-10-11 20:52:30] 2025-10-12 00:51:34,983 | INFO     | intersect: 11121176244.149385
[2025-10-11 20:52:30] 2025-10-12 00:51:34,983 | INFO     | chi2: 1.8361162497403813
[2025-10-11 20:52:30] 2025-10-12 00:51:34,984 | INFO     | current chi2=1.8361162497403813 (change=16.65883034469026 %)
[2025-10-11 20:52:30] 2025-10-12 00:51:34,984 | INFO     | left removable region: 20
[2025-10-11 20:52:30] 2025-10-12 00:51:34,984 | INFO     | sum of square deviations: 2871448883.314295
[2025-10-11 20:52:30] 2025-10-12 00:51:34,989 | INFO     | sum of deviations: -2236675643.3428593
[2025-10-11 20:52:30] 2025-10-12 00:51:34,990 | INFO     | mean x: 1760223178.057143
[2025-10-11 20:52:30] 2025-10-12 00:51:34,990 | INFO     | mean y: 2142834.6952380952
[2025-10-11 20:52:30] 2025-10-12 00:51:34,990 | INFO     | -- intersect: 1373244487.2741053
[2025-10-11 20:52:30] 2025-10-12 00:51:34,990 | INFO     | intersect: 1373244487.2741053
[2025-10-11 20:52:30] 2025-10-12 00:51:34,991 | INFO     | chi2: 0.10947983499832192
[2025-10-11 20:52:30] 2025-10-12 00:51:34,991 | INFO     | -- intersect: 1373244487.2741053
[2025-10-11 20:52:30] 2025-10-12 00:51:34,991 | INFO     | current memory leak: -0.78 B/s (using 210 data points, chi2=0.11)
[2025-10-11 20:52:30] 2025-10-12 00:51:34,992 | INFO     | could have reported an average CPU frequency of 2675 MHz (12 samples)
[2025-10-11 20:52:30] 2025-10-12 00:51:34,992 | INFO     | ..............................
[2025-10-11 20:52:30] 2025-10-12 00:51:34,992 | INFO     | . Timing measurements:
[2025-10-11 20:52:30] 2025-10-12 00:51:34,992 | INFO     | . get job = 0 s
[2025-10-11 20:52:30] 2025-10-12 00:51:34,992 | INFO     | . initial setup = 6 s
[2025-10-11 20:52:30] 2025-10-12 00:51:34,992 | INFO     | . payload setup = 41 s
[2025-10-11 20:52:30] 2025-10-12 00:51:34,992 | INFO     | . stage-in = 0 s
[2025-10-11 20:52:30] 2025-10-12 00:51:34,992 | INFO     | . payload execution = 14687 s
[2025-10-11 20:52:30] 2025-10-12 00:51:34,992 | INFO     | . stage-out = 5 s
[2025-10-11 20:52:30] 2025-10-12 00:51:34,996 | INFO     | . log creation = 0 s
[2025-10-11 20:52:30] 2025-10-12 00:51:34,996 | INFO     | ..............................
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | 
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | job summary report
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | --------------------------------------------------
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | PanDA job id: 6838775182
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | task id: 46676269
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | errors: (none)
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | pilot state: finished 
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | transexitcode: 0
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | exeerrorcode: 0
[2025-10-11 20:52:30] 2025-10-12 00:51:35,236 | INFO     | exeerrordiag: 
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | exitcode: 0
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | exitmsg: OK
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | cpuconsumptiontime: 41439 s
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | nevents: 400
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | neventsw: 0
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | pid: 665426
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | pgrp: 665426
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | corecount: 8
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | event service: False
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 36: 2348997, 40: 2349415, 47: 2349443, 14735: 2380119, 14736: 2380118, 14742: 2389172, 14745:
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | --------------------------------------------------
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | 
[2025-10-11 20:52:30] 2025-10-12 00:51:35,237 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 20:52:30] 2025-10-12 00:51:35,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,420 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:52:30] 2025-10-12 00:51:35,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,420 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:52:30] 2025-10-12 00:51:35,420 | INFO     | job 6838775182 has completed (purged errors)
[2025-10-11 20:52:30] 2025-10-12 00:51:35,420 | INFO     | overall cleanup function is called
[2025-10-11 20:52:30] 2025-10-12 00:51:36,472 | INFO     | --- collectZombieJob: --- 10, [665426]
[2025-10-11 20:52:30] 2025-10-12 00:51:36,472 | INFO     | zombie collector waiting for pid 665426
[2025-10-11 20:52:30] 2025-10-12 00:51:36,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:52:30] 2025-10-12 00:51:36,472 | INFO     | collected zombie processes
[2025-10-11 20:52:30] 2025-10-12 00:51:36,472 | INFO     | will attempt to kill all subprocesses of pid=665426
[2025-10-11 20:52:30] 2025-10-12 00:51:37,866 | INFO     | process IDs to be killed: [665426] (in reverse order)
[2025-10-11 20:52:30] 2025-10-12 00:51:38,409 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:52:30] 2025-10-12 00:51:38,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:52:30] 2025-10-12 00:51:38,503 | INFO     | did not find any defunct processes belonging to 665426
[2025-10-11 20:52:30] 2025-10-12 00:51:38,582 | INFO     | did not find any defunct processes belonging to 665426
[2025-10-11 20:52:30] 2025-10-12 00:51:38,583 | INFO     | ready for new job
[2025-10-11 20:52:30] 2025-10-12 00:51:38,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:52:30] 2025-10-12 00:51:38,606 | INFO     | ***************************************
[2025-10-11 20:52:30] 2025-10-12 00:51:38,606 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:52:30] 2025-10-12 00:51:38,606 | INFO     | ***************************************
[2025-10-11 20:52:30] 2025-10-12 00:51:38,606 | INFO     | 
[2025-10-11 20:52:30] 2025-10-12 00:51:38,647 | INFO     | architecture information:
[2025-10-11 20:52:30] 2025-10-12 00:51:38,662 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:52:30] 2025-10-12 00:51:38,715 | INFO     | cat /etc/os-release:
[2025-10-11 20:52:30] NAME="CentOS Linux"
[2025-10-11 20:52:30] VERSION="7 (Core)"
[2025-10-11 20:52:30] ID="centos"
[2025-10-11 20:52:30] ID_LIKE="rhel fedora"
[2025-10-11 20:52:30] VERSION_ID="7"
[2025-10-11 20:52:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:52:30] ANSI_COLOR="0;31"
[2025-10-11 20:52:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:52:30] HOME_URL="https://www.centos.org/"
[2025-10-11 20:52:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:52:30] 
[2025-10-11 20:52:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:52:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:52:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:52:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:52:30] 
[2025-10-11 20:52:30] 2025-10-12 00:51:38,715 | INFO     | ***************************************
[2025-10-11 20:52:30] 2025-10-12 00:51:39,218 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 20:52:30] 2025-10-12 00:51:39,322 | INFO     | sufficient remaining disk space (94406443008 B)
[2025-10-11 20:52:30] 2025-10-12 00:51:39,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:52:30] 2025-10-12 00:51:39,322 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:52:30] 2025-10-12 00:51:39,323 | INFO     | update_server=False
[2025-10-11 20:52:30] 2025-10-12 00:51:39,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:52:30] 2025-10-12 00:51:39,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:52:30] 2025-10-12 00:51:39,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:52:30] 2025-10-12 00:51:39,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:52:30] 2025-10-12 00:51:39,326 | INFO     | aborting loop
[2025-10-11 20:52:30] 2025-10-12 00:51:39,560 | INFO     | all data control threads have been joined
[2025-10-11 20:52:30] 2025-10-12 00:51:39,964 | INFO     | all payload control threads have been joined
[2025-10-11 20:52:30] 2025-10-12 00:51:40,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:52:30] 2025-10-12 00:51:40,329 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:40,334 | INFO     | [job] validate thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:40,347 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:40,566 | INFO     | [data] control thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:40,840 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:40,970 | INFO     | [payload] control thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:40,979 | INFO     | all job control threads have been joined
[2025-10-11 20:52:30] 2025-10-12 00:51:41,013 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:41,141 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:41,284 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:41,331 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:41,361 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:41,666 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:41,803 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:41,851 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:41,985 | INFO     | [job] control thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:51:43,333 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:52:30] 2025-10-12 00:52:07,710 | INFO     | PID=655521 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 20:52:30] 2025-10-12 00:52:07,711 | INFO     | .. there are 52 such processes running
[2025-10-11 20:52:30] 2025-10-12 00:52:07,711 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:52:30] 2025-10-12 00:52:07,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:52:30] 2025-10-12 00:52:07,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:52:30] 2025-10-12 00:52:21,527 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:52:30] 2025-10-12 00:52:23,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710986528576)>', '<ExcThread(monitor, started 140710493804288)>']
[2025-10-11 20:52:30] 2025-10-12 00:52:23,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:52:30] 2025-10-12 00:52:23,841 | INFO     | [monitor] control thread has ended
[2025-10-11 20:52:30] 2025-10-12 00:52:28,164 | INFO     | all workflow threads have been joined
[2025-10-11 20:52:30] 2025-10-12 00:52:28,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:52:30] 2025-10-12 00:52:28,164 | INFO     | traces error code: 0
[2025-10-11 20:52:30] 2025-10-12 00:52:28,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:52:30] 2025-10-12 00:52:28,985 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:52:30] 2025-10-12 00:52:29,024 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:52:30] 2025-10-12 00:52:29,046 [wrapper] pilotpid: 655521
[2025-10-11 20:52:30] 2025-10-12 00:52:29,076 [wrapper] Pilot exit status: 0
[2025-10-11 20:52:30] 2025-10-12 00:52:29,199 [wrapper] pandaids: 6838775182
[2025-10-11 20:52:30] 2025-10-12 00:52:29,787 [wrapper] cleanup supervisor_pilot 1577781 655522
[2025-10-11 20:52:30] 2025-10-12 00:52:29,792 [wrapper] Test setup, not cleaning
[2025-10-11 20:52:30] 2025-10-12 00:52:29,796 [wrapper] apfmon messages muted
[2025-10-11 20:52:30] 2025-10-12 00:52:29,799 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:52:30] 2025-10-12 00:52:29,802 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:52:30]  *** Error codes and diagnostics ***
[2025-10-11 20:52:30]     "exeErrorCode": 0,
[2025-10-11 20:52:30]     "exeErrorDiag": "",
[2025-10-11 20:52:30]     "pilotErrorCode": 0,
[2025-10-11 20:52:30]     "pilotErrorDiag": "",
[2025-10-11 20:52:30]  *** Listing of results directory ***
[2025-10-11 20:52:30] total 415904
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:34 queuedata.json
[2025-10-11 20:52:30] -rwx------. 1 boincer umatlas     36292 Oct 11 14:35 runpilot2-wrapper.sh
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:52:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:42 run_atlas
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:42 job.xml
[2025-10-11 20:52:30] -rw-r--r--. 2 boincer umatlas 223352815 Oct 11 16:42 EVNT.46676267._002527.pool.root.1
[2025-10-11 20:52:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:42 start_atlas.sh
[2025-10-11 20:52:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:42 shared
[2025-10-11 20:52:30] -rw-r--r--. 2 boincer umatlas    569686 Oct 11 16:42 input.tar.gz
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:42 boinc_lockfile
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 16:42 pandaJob.out
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas    975528 Oct 11 16:43 agis_schedconf.cvmfs.json
[2025-10-11 20:52:30] drwx------. 5 boincer umatlas      4096 Oct 11 16:43 pilot3
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas      6860 Oct 11 20:45 init_data.xml
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas 194109230 Oct 11 20:49 HITS.46676269._062870.pool.root.1
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas       531 Oct 11 20:49 boinc_task_state.xml
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas      1046 Oct 11 20:50 memory_monitor_summary.json
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas   1560580 Oct 11 20:50 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas    468908 Oct 11 20:50 log.46676269._062870.job.log.tgz.1
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas        95 Oct 11 20:51 pilot_heartbeat.json
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas      7829 Oct 11 20:51 heartbeat.json
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas      4823 Oct 11 20:52 pilotlog.txt
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 20:52 boinc_mmap_file
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas        28 Oct 11 20:52 wrapper_checkpoint.txt
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas   1796486 Oct 11 20:52 log.46676269._062870.job.log.1
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas       357 Oct 11 20:52 output.list
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas       620 Oct 11 20:52 runtime_log
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas   2283520 Oct 11 20:52 result.tar.gz
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 20:52 runtime_log.err
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas       655 Oct 11 20:52 ADmKDmzbtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyHhNDmtuDxMm.diag
[2025-10-11 20:52:30] -rw-r--r--. 1 boincer umatlas      9282 Oct 11 20:52 stderr.txt
[2025-10-11 20:52:30] HITS file was successfully produced:
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas 194109230 Oct 11 20:49 shared/HITS.pool.root.1
[2025-10-11 20:52:30]  *** Contents of shared directory: ***
[2025-10-11 20:52:30] total 410496
[2025-10-11 20:52:30] -rw-r--r--. 2 boincer umatlas 223352815 Oct 11 16:42 ATLAS.root_0
[2025-10-11 20:52:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:42 start_atlas.sh
[2025-10-11 20:52:30] -rw-r--r--. 2 boincer umatlas    569686 Oct 11 16:42 input.tar.gz
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas 194109230 Oct 11 20:49 HITS.pool.root.1
[2025-10-11 20:52:30] -rw-------. 1 boincer umatlas   2283520 Oct 11 20:52 result.tar.gz
20:52:32 (650724): run_atlas exited; CPU time 42144.820445
20:52:32 (650724): called boinc_finish(0)

</stderr_txt>
]]>

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