Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:27:18 (3612962): wrapper (7.7.26015): starting
17:27:18 (3612962): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:27:18] Arguments: --nthreads 8
[2025-10-11 17:27:18] Threads: 8
[2025-10-11 17:27:18] Checking for CVMFS
[2025-10-11 17:27:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:27:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:27:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:27:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:27:22] 2.13.2.0 7655 56387 371488 151597 2 56 24703288 32935937 32338 16776704 10 88352181 99.528 111205538 8812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 17:27:22] CVMFS is ok
[2025-10-11 17:27:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:27:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:27:22] Further information can be found at the LHC@home message board.
[2025-10-11 17:27:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:27:22] Checking for apptainer binary...
[2025-10-11 17:27:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:27:22] Running /usr/bin/apptainer --version
[2025-10-11 17:27:23] apptainer version 1.4.3-1.el9
[2025-10-11 17:27:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:27:24] c6-12-25-4.aglt2.org
[2025-10-11 17:27:24] apptainer works
[2025-10-11 17:27:25] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:27:25] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:27:25] Starting ATLAS job with PandaID=6838775174
[2025-10-11 17:27:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:27:17]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:27:17] 2025-10-12 23:25:41,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:27:17] 2025-10-12 23:25:42,485 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:27:17] 2025-10-12 23:25:42,511 | INFO     | sum of square deviations: 1097566429997.1335
[2025-10-12 19:27:17] 2025-10-12 23:25:43,376 | INFO     | sum of deviations: 1941855150404.0532
[2025-10-12 19:27:17] 2025-10-12 23:25:43,446 | INFO     | mean x: 1760264918.6141732
[2025-10-12 19:27:17] 2025-10-12 23:25:43,447 | INFO     | mean y: 2097127.654855643
[2025-10-12 19:27:17] 2025-10-12 23:25:43,447 | INFO     | -- intersect: -3112228716.1990156
[2025-10-12 19:27:17] 2025-10-12 23:25:43,447 | INFO     | intersect: -3112228716.1990156
[2025-10-12 19:27:17] 2025-10-12 23:25:43,512 | INFO     | chi2: 9.94104037233486
[2025-10-12 19:27:17] 2025-10-12 23:25:43,550 | INFO     | sum of square deviations: 1086799285772.3748
[2025-10-12 19:27:17] 2025-10-12 23:25:43,906 | INFO     | monitor loop #2479: job 0:6838775174 is in state 'finished'
[2025-10-12 19:27:17] 2025-10-12 23:25:43,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:27:17] 2025-10-12 23:25:45,593 | INFO     | sum of deviations: 2117351606793.4175
[2025-10-12 19:27:17] 2025-10-12 23:25:45,697 | INFO     | mean x: 1760264766.116524
[2025-10-12 19:27:17] 2025-10-12 23:25:45,698 | INFO     | mean y: 2099608.8676761026
[2025-10-12 19:27:17] 2025-10-12 23:25:45,698 | INFO     | -- intersect: -3427327958.587761
[2025-10-12 19:27:17] 2025-10-12 23:25:45,698 | INFO     | intersect: -3427327958.587761
[2025-10-12 19:27:17] 2025-10-12 23:25:45,970 | INFO     | chi2: 8.476149309179378
[2025-10-12 19:27:17] 2025-10-12 23:25:45,971 | INFO     | current chi2=8.476149309179378 (change=14.735792314375463 %)
[2025-10-12 19:27:17] 2025-10-12 23:25:45,971 | INFO     | right removable region: 1518
[2025-10-12 19:27:17] 2025-10-12 23:25:46,262 | INFO     | sum of square deviations: 1086798528517.1411
[2025-10-12 19:27:17] 2025-10-12 23:25:46,787 | INFO     | monitor loop #2480: job 0:6838775174 is in state 'finished'
[2025-10-12 19:27:17] 2025-10-12 23:25:46,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:27:17] 2025-10-12 23:25:47,073 | INFO     | sum of deviations: 1539405317004.3718
[2025-10-12 19:27:17] 2025-10-12 23:25:47,073 | INFO     | mean x: 1760265071.1171823
[2025-10-12 19:27:17] 2025-10-12 23:25:47,074 | INFO     | mean y: 2102825.8630678076
[2025-10-12 19:27:17] 2025-10-12 23:25:47,074 | INFO     | -- intersect: -2491240087.9446507
[2025-10-12 19:27:17] 2025-10-12 23:25:47,074 | INFO     | intersect: -2491240087.9446507
[2025-10-12 19:27:17] 2025-10-12 23:25:47,080 | INFO     | chi2: 6.403105596215079
[2025-10-12 19:27:17] 2025-10-12 23:25:47,093 | INFO     | current chi2=6.403105596215079 (change=35.58918024280012 %)
[2025-10-12 19:27:17] 2025-10-12 23:25:47,099 | INFO     | sum of square deviations: 1076101557871.3373
[2025-10-12 19:27:17] 2025-10-12 23:25:47,616 | INFO     | PID=3620482 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:27:17] 2025-10-12 23:25:47,617 | INFO     | .. there are 37 such processes running
[2025-10-12 19:27:17] 2025-10-12 23:25:48,079 | INFO     | sum of deviations: 1272377776247.8835
[2025-10-12 19:27:17] 2025-10-12 23:25:48,080 | INFO     | mean x: 1760265223.6182299
[2025-10-12 19:27:17] 2025-10-12 23:25:48,080 | INFO     | mean y: 2106632.2939233817
[2025-10-12 19:27:17] 2025-10-12 23:25:48,080 | INFO     | -- intersect: -2079223270.4935942
[2025-10-12 19:27:17] 2025-10-12 23:25:48,099 | INFO     | intersect: -2079223270.4935942
[2025-10-12 19:27:17] 2025-10-12 23:25:48,128 | INFO     | chi2: 4.931302088834087
[2025-10-12 19:27:17] 2025-10-12 23:25:48,129 | INFO     | current chi2=4.931302088834087 (change=22.985775968632865 %)
[2025-10-12 19:27:17] 2025-10-12 23:25:48,129 | INFO     | left removable region: 20
[2025-10-12 19:27:17] 2025-10-12 23:25:48,160 | INFO     | sum of square deviations: 1042344122232.6299
[2025-10-12 19:27:17] 2025-10-12 23:25:48,715 | INFO     | time since job start (93367s) is within the limit (172800.0s)
[2025-10-12 19:27:17] 2025-10-12 23:25:48,937 | INFO     | sum of deviations: 1124553841411.5952
[2025-10-12 19:27:17] 2025-10-12 23:25:48,938 | INFO     | mean x: 1760265345.6208277
[2025-10-12 19:27:17] 2025-10-12 23:25:48,938 | INFO     | mean y: 2114082.79506008
[2025-10-12 19:27:17] 2025-10-12 23:25:48,938 | INFO     | -- intersect: -1896983455.244133
[2025-10-12 19:27:17] 2025-10-12 23:25:48,938 | INFO     | intersect: -1896983455.244133
[2025-10-12 19:27:17] 2025-10-12 23:25:48,956 | INFO     | chi2: 2.2883104929454086
[2025-10-12 19:27:17] 2025-10-12 23:25:48,976 | INFO     | -- intersect: -1896983455.244133
[2025-10-12 19:27:17] 2025-10-12 23:25:48,977 | INFO     | current memory leak: 1.08 B/s (using 1498 data points, chi2=2.29)
[2025-10-12 19:27:17] 2025-10-12 23:25:48,998 | INFO     | could have reported an average CPU frequency of 999 MHz (53 samples)
[2025-10-12 19:27:17] 2025-10-12 23:25:48,999 | INFO     | ..............................
[2025-10-12 19:27:17] 2025-10-12 23:25:48,999 | INFO     | . Timing measurements:
[2025-10-12 19:27:17] 2025-10-12 23:25:48,999 | INFO     | . get job = 0 s
[2025-10-12 19:27:17] 2025-10-12 23:25:49,000 | INFO     | . initial setup = 12 s
[2025-10-12 19:27:17] 2025-10-12 23:25:49,000 | INFO     | . payload setup = 85 s
[2025-10-12 19:27:17] 2025-10-12 23:25:49,000 | INFO     | . stage-in = 1 s
[2025-10-12 19:27:17] 2025-10-12 23:25:49,007 | INFO     | . payload execution = 93019 s
[2025-10-12 19:27:17] 2025-10-12 23:25:49,007 | INFO     | . stage-out = 21 s
[2025-10-12 19:27:17] 2025-10-12 23:25:49,008 | INFO     | . log creation = 4 s
[2025-10-12 19:27:17] 2025-10-12 23:25:49,008 | INFO     | ..............................
[2025-10-12 19:27:17] 2025-10-12 23:25:50,824 | INFO     | time since job start (93369s) is within the limit (172800.0s)
[2025-10-12 19:27:17] 2025-10-12 23:25:50,993 | INFO     | 
[2025-10-12 19:27:17] 2025-10-12 23:25:50,993 | INFO     | job summary report
[2025-10-12 19:27:17] 2025-10-12 23:25:50,994 | INFO     | --------------------------------------------------
[2025-10-12 19:27:17] 2025-10-12 23:25:50,994 | INFO     | PanDA job id: 6838775174
[2025-10-12 19:27:17] 2025-10-12 23:25:50,994 | INFO     | task id: 46676269
[2025-10-12 19:27:17] 2025-10-12 23:25:50,994 | INFO     | errors: (none)
[2025-10-12 19:27:17] 2025-10-12 23:25:50,995 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:27:17] 2025-10-12 23:25:50,995 | INFO     | pilot state: finished 
[2025-10-12 19:27:17] 2025-10-12 23:25:50,995 | INFO     | transexitcode: 0
[2025-10-12 19:27:17] 2025-10-12 23:25:50,995 | INFO     | exeerrorcode: 0
[2025-10-12 19:27:17] 2025-10-12 23:25:50,996 | INFO     | exeerrordiag: 
[2025-10-12 19:27:17] 2025-10-12 23:25:50,996 | INFO     | exitcode: 0
[2025-10-12 19:27:17] 2025-10-12 23:25:50,996 | INFO     | exitmsg: OK
[2025-10-12 19:27:17] 2025-10-12 23:25:50,996 | INFO     | cpuconsumptiontime: 120288 s
[2025-10-12 19:27:17] 2025-10-12 23:25:50,996 | INFO     | nevents: 400
[2025-10-12 19:27:17] 2025-10-12 23:25:50,997 | INFO     | neventsw: 0
[2025-10-12 19:27:17] 2025-10-12 23:25:50,997 | INFO     | pid: 3634123
[2025-10-12 19:27:17] 2025-10-12 23:25:50,997 | INFO     | pgrp: 3634123
[2025-10-12 19:27:17] 2025-10-12 23:25:50,997 | INFO     | corecount: 8
[2025-10-12 19:27:17] 2025-10-12 23:25:50,997 | INFO     | event service: False
[2025-10-12 19:27:17] 2025-10-12 23:25:50,998 | INFO     | sizes: {0: 2348029, 1: 2348714, 3: 2348742, 4: 2348742, 5: 2348913, 18: 2348969, 32: 2349125, 44: 2349153, 55: 2349181, 70: 2349499, 82: 2349499, 93119: 2407534, 9
[2025-10-12 19:27:17] 2025-10-12 23:25:50,998 | INFO     | --------------------------------------------------
[2025-10-12 19:27:17] 2025-10-12 23:25:50,998 | INFO     | 
[2025-10-12 19:27:17] 2025-10-12 23:25:50,999 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 19:27:17] 2025-10-12 23:25:51,117 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,118 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,118 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,118 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:27:17] 2025-10-12 23:25:51,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:27:17] 2025-10-12 23:25:51,184 | INFO     | job 6838775174 has completed (purged errors)
[2025-10-12 19:27:17] 2025-10-12 23:25:51,184 | INFO     | overall cleanup function is called
[2025-10-12 19:27:17] 2025-10-12 23:25:52,198 | INFO     | --- collectZombieJob: --- 10, [3634123]
[2025-10-12 19:27:17] 2025-10-12 23:25:52,199 | INFO     | zombie collector waiting for pid 3634123
[2025-10-12 19:27:17] 2025-10-12 23:25:52,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:27:17] 2025-10-12 23:25:52,200 | INFO     | collected zombie processes
[2025-10-12 19:27:17] 2025-10-12 23:25:52,200 | INFO     | will attempt to kill all subprocesses of pid=3634123
[2025-10-12 19:27:17] 2025-10-12 23:26:01,112 | INFO     | process IDs to be killed: [3634123] (in reverse order)
[2025-10-12 19:27:17] 2025-10-12 23:26:03,051 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:27:17] 2025-10-12 23:26:03,056 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:27:17] 2025-10-12 23:26:03,200 | INFO     | did not find any defunct processes belonging to 3634123
[2025-10-12 19:27:17] 2025-10-12 23:26:03,381 | INFO     | did not find any defunct processes belonging to 3634123
[2025-10-12 19:27:17] 2025-10-12 23:26:03,400 | INFO     | ready for new job
[2025-10-12 19:27:17] 2025-10-12 23:26:03,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:27:17] 2025-10-12 23:26:03,461 | INFO     | ***************************************
[2025-10-12 19:27:17] 2025-10-12 23:26:03,462 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:27:17] 2025-10-12 23:26:03,462 | INFO     | ***************************************
[2025-10-12 19:27:17] 2025-10-12 23:26:03,462 | INFO     | 
[2025-10-12 19:27:17] 2025-10-12 23:26:03,564 | INFO     | architecture information:
[2025-10-12 19:27:17] 2025-10-12 23:26:03,571 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:27:17] 2025-10-12 23:26:03,731 | INFO     | cat /etc/os-release:
[2025-10-12 19:27:17] NAME="CentOS Linux"
[2025-10-12 19:27:17] VERSION="7 (Core)"
[2025-10-12 19:27:17] ID="centos"
[2025-10-12 19:27:17] ID_LIKE="rhel fedora"
[2025-10-12 19:27:17] VERSION_ID="7"
[2025-10-12 19:27:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:27:17] ANSI_COLOR="0;31"
[2025-10-12 19:27:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:27:17] HOME_URL="https://www.centos.org/"
[2025-10-12 19:27:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:27:17] 
[2025-10-12 19:27:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:27:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:27:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:27:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:27:17] 
[2025-10-12 19:27:17] 2025-10-12 23:26:03,732 | INFO     | ***************************************
[2025-10-12 19:27:17] 2025-10-12 23:26:04,236 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 19:27:17] 2025-10-12 23:26:04,311 | INFO     | sufficient remaining disk space (94298439680 B)
[2025-10-12 19:27:17] 2025-10-12 23:26:04,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:27:17] 2025-10-12 23:26:04,313 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:27:17] 2025-10-12 23:26:04,313 | INFO     | update_server=False
[2025-10-12 19:27:17] 2025-10-12 23:26:04,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:27:17] 2025-10-12 23:26:04,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:27:17] 2025-10-12 23:26:04,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:27:17] 2025-10-12 23:26:04,355 | INFO     | all data control threads have been joined
[2025-10-12 19:27:17] 2025-10-12 23:26:04,552 | INFO     | all payload control threads have been joined
[2025-10-12 19:27:17] 2025-10-12 23:26:04,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:27:17] 2025-10-12 23:26:04,780 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 19:27:17] 2025-10-12 23:26:04,780 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 19:27:17] 2025-10-12 23:26:04,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:27:17] 2025-10-12 23:26:04,781 | INFO     | will abort loop
[2025-10-12 19:27:17] 2025-10-12 23:26:05,329 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:05,331 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:05,362 | INFO     | [data] control thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:05,445 | INFO     | [job] validate thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:05,535 | INFO     | all job control threads have been joined
[2025-10-12 19:27:17] 2025-10-12 23:26:05,559 | INFO     | [payload] control thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:05,583 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:05,592 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:05,788 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:06,031 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:06,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:06,244 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:06,254 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:06,331 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:06,542 | INFO     | [job] control thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:06,715 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:08,716 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:27:17] 2025-10-12 23:26:34,450 | INFO     | PID=3620482 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:27:17] 2025-10-12 23:26:34,459 | INFO     | .. there are 37 such processes running
[2025-10-12 19:27:17] 2025-10-12 23:26:34,464 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:27:17] 2025-10-12 23:26:34,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:27:17] 2025-10-12 23:26:34,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:27:17] 2025-10-12 23:26:56,268 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:27:17] 2025-10-12 23:26:58,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718148159296)>', '<ExcThread(monitor, started 139717249046272)>']
[2025-10-12 19:27:17] 2025-10-12 23:26:58,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:27:17] 2025-10-12 23:26:58,754 | INFO     | [monitor] control thread has ended
[2025-10-12 19:27:17] 2025-10-12 23:27:03,157 | INFO     | all workflow threads have been joined
[2025-10-12 19:27:17] 2025-10-12 23:27:03,157 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:27:17] 2025-10-12 23:27:03,158 | INFO     | traces error code: 0
[2025-10-12 19:27:17] 2025-10-12 23:27:03,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:27:17] 2025-10-12 23:27:12,028 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:27:17] 2025-10-12 23:27:12,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:27:17] 2025-10-12 23:27:12,125 [wrapper] pilotpid: 3620482
[2025-10-12 19:27:17] 2025-10-12 23:27:12,213 [wrapper] Pilot exit status: 0
[2025-10-12 19:27:17] 2025-10-12 23:27:12,388 [wrapper] pandaids: 6838775174
[2025-10-12 19:27:17] 2025-10-12 23:27:13,847 [wrapper] cleanup supervisor_pilot 3294269 3620483
[2025-10-12 19:27:17] 2025-10-12 23:27:13,893 [wrapper] Test setup, not cleaning
[2025-10-12 19:27:17] 2025-10-12 23:27:13,936 [wrapper] apfmon messages muted
[2025-10-12 19:27:17] 2025-10-12 23:27:13,992 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:27:17] 2025-10-12 23:27:14,068 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:27:17]  *** Error codes and diagnostics ***
[2025-10-12 19:27:17]     "exeErrorCode": 0,
[2025-10-12 19:27:17]     "exeErrorDiag": "",
[2025-10-12 19:27:17]     "pilotErrorCode": 0,
[2025-10-12 19:27:17]     "pilotErrorDiag": "",
[2025-10-12 19:27:17]  *** Listing of results directory ***
[2025-10-12 19:27:17] total 427016
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:34 queuedata.json
[2025-10-12 19:27:17] -rwx------. 1 boincer umatlas     36292 Oct 11 14:35 runpilot2-wrapper.sh
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas       100 Oct 11 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:27:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 17:27 run_atlas
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas       105 Oct 11 17:27 job.xml
[2025-10-12 19:27:17] -rw-r--r--. 2 boincer umatlas 223352815 Oct 11 17:27 EVNT.46676267._002527.pool.root.1
[2025-10-12 19:27:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 17:27 start_atlas.sh
[2025-10-12 19:27:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 17:27 shared
[2025-10-12 19:27:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 17:27 input.tar.gz
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas         0 Oct 11 17:27 boinc_lockfile
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 17:27 pandaJob.out
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas    975528 Oct 11 17:29 agis_schedconf.cvmfs.json
[2025-10-12 19:27:17] drwx------. 5 boincer umatlas      4096 Oct 11 17:29 pilot3
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas 194250818 Oct 12 19:21 HITS.46676269._062862.pool.root.1
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas       532 Oct 12 19:21 boinc_task_state.xml
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas      6859 Oct 12 19:22 init_data.xml
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas      1053 Oct 12 19:23 memory_monitor_summary.json
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas   1117405 Oct 12 19:24 log.46676269._062862.job.log.tgz.1
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas        96 Oct 12 19:25 pilot_heartbeat.json
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas      7863 Oct 12 19:25 heartbeat.json
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas      5010 Oct 12 19:27 pilotlog.txt
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:27 boinc_mmap_file
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas        29 Oct 12 19:27 wrapper_checkpoint.txt
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas   6760516 Oct 12 19:27 log.46676269._062862.job.log.1
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas       357 Oct 12 19:27 output.list
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:27 runtime_log
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas   7895040 Oct 12 19:27 result.tar.gz
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 19:27 runtime_log.err
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas       667 Oct 12 19:27 lM4LDmybtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqHhNDmCkHIMo.diag
[2025-10-12 19:27:17] -rw-r--r--. 1 boincer umatlas     21388 Oct 12 19:27 stderr.txt
[2025-10-12 19:27:17] HITS file was successfully produced:
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas 194250818 Oct 12 19:21 shared/HITS.pool.root.1
[2025-10-12 19:27:17]  *** Contents of shared directory: ***
[2025-10-12 19:27:17] total 416116
[2025-10-12 19:27:17] -rw-r--r--. 2 boincer umatlas 223352815 Oct 11 17:27 ATLAS.root_0
[2025-10-12 19:27:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 17:27 start_atlas.sh
[2025-10-12 19:27:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 17:27 input.tar.gz
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas 194250818 Oct 12 19:21 HITS.pool.root.1
[2025-10-12 19:27:17] -rw-------. 1 boincer umatlas   7895040 Oct 12 19:27 result.tar.gz
19:27:19 (3612962): run_atlas exited; CPU time 127792.904661
19:27:19 (3612962): called boinc_finish(0)

</stderr_txt>
]]>

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