Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:37:10 (3929930): wrapper (7.7.26015): starting
05:37:10 (3929930): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:37:10] Arguments: --nthreads 4
[2025-10-13 05:37:10] Threads: 4
[2025-10-13 05:37:10] Checking for CVMFS
[2025-10-13 05:37:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:37:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:37:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:37:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:37:11] 2.12.7.0 3726681 10110 64780 151647 1 57 3417616 4096000 917 130560 0 12419667 99.994 355035 418 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-10-13 05:37:11] CVMFS is ok
[2025-10-13 05:37:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:37:11] Checking for apptainer binary...
[2025-10-13 05:37:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:37:11] Running /usr/bin/apptainer --version
[2025-10-13 05:37:11] apptainer version 1.4.2
[2025-10-13 05:37:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:37:11] TS-P320
[2025-10-13 05:37:11] apptainer works
[2025-10-13 05:37:11] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:37:11] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:37:11] Starting ATLAS job with PandaID=6838775049
[2025-10-13 05:37:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:43:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:43:35] 2025-10-13 05:42:49,323 | INFO     | -- intersect: 55069820027.52178
[2025-10-13 07:43:35] 2025-10-13 05:42:49,323 | INFO     | intersect: 55069820027.52178
[2025-10-13 07:43:35] 2025-10-13 05:42:49,323 | INFO     | chi2: 1.8718062977276668
[2025-10-13 07:43:35] 2025-10-13 05:42:49,323 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,324 | INFO     | sum of deviations: -10454067638.000002
[2025-10-13 07:43:35] 2025-10-13 05:42:49,324 | INFO     | mean x: 1760330255.0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,324 | INFO     | mean y: 2415537.495798319
[2025-10-13 07:43:35] 2025-10-13 05:42:49,324 | INFO     | -- intersect: 35222534638.45642
[2025-10-13 07:43:35] 2025-10-13 05:42:49,324 | INFO     | intersect: 35222534638.45642
[2025-10-13 07:43:35] 2025-10-13 05:42:49,324 | INFO     | chi2: 1.2123333454014147
[2025-10-13 07:43:35] 2025-10-13 05:42:49,324 | INFO     | current chi2=1.2123333454014147 (change=35.23190156624851 %)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,325 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 07:43:35] 2025-10-13 05:42:49,325 | INFO     | sum of deviations: -9733732088.500002
[2025-10-13 07:43:35] 2025-10-13 05:42:49,325 | INFO     | mean x: 1760330102.5
[2025-10-13 07:43:35] 2025-10-13 05:42:49,325 | INFO     | mean y: 2417278.4298245613
[2025-10-13 07:43:35] 2025-10-13 05:42:49,325 | INFO     | -- intersect: 37302856441.26791
[2025-10-13 07:43:35] 2025-10-13 05:42:49,325 | INFO     | intersect: 37302856441.26791
[2025-10-13 07:43:35] 2025-10-13 05:42:49,326 | INFO     | chi2: 1.2089275188758843
[2025-10-13 07:43:35] 2025-10-13 05:42:49,326 | INFO     | current chi2=1.2089275188758843 (change=0.28093152254280707 %)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,326 | INFO     | right removable region: 113
[2025-10-13 07:43:35] 2025-10-13 05:42:49,326 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,326 | INFO     | sum of deviations: -27605083837.999992
[2025-10-13 07:43:35] 2025-10-13 05:42:49,326 | INFO     | mean x: 1760330560.0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,327 | INFO     | mean y: 2417696.4789915965
[2025-10-13 07:43:35] 2025-10-13 05:42:49,327 | INFO     | -- intersect: 93004925685.60999
[2025-10-13 07:43:35] 2025-10-13 05:42:49,327 | INFO     | intersect: 93004925685.60999
[2025-10-13 07:43:35] 2025-10-13 05:42:49,327 | INFO     | chi2: 0.8381606887286673
[2025-10-13 07:43:35] 2025-10-13 05:42:49,327 | INFO     | current chi2=0.8381606887286673 (change=55.221825583866426 %)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,327 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 07:43:35] 2025-10-13 05:42:49,328 | INFO     | sum of deviations: -23146183246.999996
[2025-10-13 07:43:35] 2025-10-13 05:42:49,328 | INFO     | mean x: 1760330712.5
[2025-10-13 07:43:35] 2025-10-13 05:42:49,328 | INFO     | mean y: 2406910.6315789474
[2025-10-13 07:43:35] 2025-10-13 05:42:49,328 | INFO     | -- intersect: 88700461406.52605
[2025-10-13 07:43:35] 2025-10-13 05:42:49,328 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6838775049: 2672404 B (within 2537553920 B limit)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,328 | INFO     | intersect: 88700461406.52605
[2025-10-13 07:43:35] 2025-10-13 05:42:49,329 | INFO     | chi2: 0.8314269146651431
[2025-10-13 07:43:35] 2025-10-13 05:42:49,329 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6838775049/HITS.46676269._062737.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,329 | INFO     | current chi2=0.8314269146651431 (change=0.803398936991204 %)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,329 | INFO     | total size of present files: 0 B (workdir size: 2672404 B)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,329 | INFO     | left removable region: 20
[2025-10-13 07:43:35] 2025-10-13 05:42:49,329 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6838775049/HITS.46676269._062737.pool.root.1 since it does not exist
[2025-10-13 07:43:35] 2025-10-13 05:42:49,329 | INFO     | sum of square deviations: 249388862.0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,330 | INFO     | sum of deviations: -6742446205.0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,330 | INFO     | mean x: 1760330682.0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,330 | INFO     | mean y: 2402435.1075268816
[2025-10-13 07:43:35] 2025-10-13 05:42:49,330 | INFO     | -- intersect: 47594483457.53892
[2025-10-13 07:43:35] 2025-10-13 05:42:49,330 | INFO     | intersect: 47594483457.53892
[2025-10-13 07:43:35] 2025-10-13 05:42:49,330 | INFO     | chi2: 0.1025512066155301
[2025-10-13 07:43:35] 2025-10-13 05:42:49,330 | INFO     | -- intersect: 47594483457.53892
[2025-10-13 07:43:35] 2025-10-13 05:42:49,330 | INFO     | current memory leak: -27.04 B/s (using 93 data points, chi2=0.10)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,331 | INFO     | could have reported an average CPU frequency of 4000 MHz (8 samples)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,331 | INFO     | ..............................
[2025-10-13 07:43:35] 2025-10-13 05:42:49,331 | INFO     | . Timing measurements:
[2025-10-13 07:43:35] 2025-10-13 05:42:49,331 | INFO     | . get job = 0 s
[2025-10-13 07:43:35] 2025-10-13 05:42:49,331 | INFO     | . initial setup = 1 s
[2025-10-13 07:43:35] 2025-10-13 05:42:49,332 | INFO     | . payload setup = 3 s
[2025-10-13 07:43:35] 2025-10-13 05:42:49,332 | INFO     | . stage-in = 0 s
[2025-10-13 07:43:35] 2025-10-13 05:42:49,332 | INFO     | . payload execution = 7509 s
[2025-10-13 07:43:35] 2025-10-13 05:42:49,332 | INFO     | . stage-out = 0 s
[2025-10-13 07:43:35] 2025-10-13 05:42:49,332 | INFO     | . log creation = 0 s
[2025-10-13 07:43:35] 2025-10-13 05:42:49,332 | INFO     | ..............................
[2025-10-13 07:43:35] 2025-10-13 05:42:49,396 | INFO     | 
[2025-10-13 07:43:35] 2025-10-13 05:42:49,396 | INFO     | job summary report
[2025-10-13 07:43:35] 2025-10-13 05:42:49,397 | INFO     | --------------------------------------------------
[2025-10-13 07:43:35] 2025-10-13 05:42:49,397 | INFO     | PanDA job id: 6838775049
[2025-10-13 07:43:35] 2025-10-13 05:42:49,397 | INFO     | task id: 46676269
[2025-10-13 07:43:35] 2025-10-13 05:42:49,397 | INFO     | errors: (none)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:43:35] 2025-10-13 05:42:49,397 | INFO     | pilot state: finished 
[2025-10-13 07:43:35] 2025-10-13 05:42:49,397 | INFO     | transexitcode: 0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,397 | INFO     | exeerrorcode: 0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | exeerrordiag: 
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | exitcode: 0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | exitmsg: OK
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | cpuconsumptiontime: 29053 s
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | nevents: 400
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | neventsw: 0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | pid: 3940039
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | pgrp: 3940039
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | corecount: 4
[2025-10-13 07:43:35] 2025-10-13 05:42:49,398 | INFO     | event service: False
[2025-10-13 07:43:35] 2025-10-13 05:42:49,399 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 7516: 2385796, 7517: 2385796, 7519: 2386018}
[2025-10-13 07:43:35] 2025-10-13 05:42:49,399 | INFO     | --------------------------------------------------
[2025-10-13 07:43:35] 2025-10-13 05:42:49,399 | INFO     | 
[2025-10-13 07:43:35] 2025-10-13 05:42:49,399 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 07:43:35] 2025-10-13 05:42:49,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:43:35] 2025-10-13 05:42:49,418 | INFO     | job 6838775049 has completed (purged errors)
[2025-10-13 07:43:35] 2025-10-13 05:42:49,418 | INFO     | overall cleanup function is called
[2025-10-13 07:43:35] 2025-10-13 05:42:49,463 | INFO     | number of running child processes to parent process 3940039: 1
[2025-10-13 07:43:35] 2025-10-13 05:42:49,464 | INFO     | maximum number of monitored processes: 6
[2025-10-13 07:43:35] 2025-10-13 05:42:49,464 | INFO     | aborting job monitoring since job object (job id=6838775049) has expired
[2025-10-13 07:43:35] 2025-10-13 05:42:50,425 | INFO     | --- collectZombieJob: --- 10, [3940039]
[2025-10-13 07:43:35] 2025-10-13 05:42:50,425 | INFO     | zombie collector waiting for pid 3940039
[2025-10-13 07:43:35] 2025-10-13 05:42:50,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:43:35] 2025-10-13 05:42:50,425 | INFO     | collected zombie processes
[2025-10-13 07:43:35] 2025-10-13 05:42:50,425 | INFO     | will attempt to kill all subprocesses of pid=3940039
[2025-10-13 07:43:35] 2025-10-13 05:42:50,481 | INFO     | process IDs to be killed: [3940039] (in reverse order)
[2025-10-13 07:43:35] 2025-10-13 05:42:50,507 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:43:35] 2025-10-13 05:42:50,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:43:35] 2025-10-13 05:42:50,509 | INFO     | did not find any defunct processes belonging to 3940039
[2025-10-13 07:43:35] 2025-10-13 05:42:50,511 | INFO     | did not find any defunct processes belonging to 3940039
[2025-10-13 07:43:35] 2025-10-13 05:42:50,511 | INFO     | ready for new job
[2025-10-13 07:43:35] 2025-10-13 05:42:50,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:43:35] 2025-10-13 05:42:50,512 | INFO     | ***************************************
[2025-10-13 07:43:35] 2025-10-13 05:42:50,512 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:43:35] 2025-10-13 05:42:50,512 | INFO     | ***************************************
[2025-10-13 07:43:35] 2025-10-13 05:42:50,512 | INFO     | 
[2025-10-13 07:43:35] 2025-10-13 05:42:50,513 | INFO     | architecture information:
[2025-10-13 07:43:35] 2025-10-13 05:42:50,513 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:43:35] 2025-10-13 05:42:50,521 | INFO     | cat /etc/os-release:
[2025-10-13 07:43:35] NAME="CentOS Linux"
[2025-10-13 07:43:35] VERSION="7 (Core)"
[2025-10-13 07:43:35] ID="centos"
[2025-10-13 07:43:35] ID_LIKE="rhel fedora"
[2025-10-13 07:43:35] VERSION_ID="7"
[2025-10-13 07:43:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:43:35] ANSI_COLOR="0;31"
[2025-10-13 07:43:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:43:35] HOME_URL="https://www.centos.org/"
[2025-10-13 07:43:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:43:35] 
[2025-10-13 07:43:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:43:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:43:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:43:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:43:35] 
[2025-10-13 07:43:35] 2025-10-13 05:42:50,521 | INFO     | ***************************************
[2025-10-13 07:43:35] 2025-10-13 05:42:51,023 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 07:43:35] 2025-10-13 05:42:51,032 | INFO     | sufficient remaining disk space (192986218496 B)
[2025-10-13 07:43:35] 2025-10-13 05:42:51,032 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:43:35] 2025-10-13 05:42:51,032 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:43:35] 2025-10-13 05:42:51,032 | INFO     | update_server=False
[2025-10-13 07:43:35] 2025-10-13 05:42:51,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:43:35] 2025-10-13 05:42:51,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:43:35] 2025-10-13 05:42:51,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:43:35] 2025-10-13 05:42:51,033 | INFO     | aborting loop
[2025-10-13 07:43:35] 2025-10-13 05:42:51,310 | INFO     | all job control threads have been joined
[2025-10-13 07:43:35] 2025-10-13 05:42:51,520 | INFO     | all payload control threads have been joined
[2025-10-13 07:43:35] 2025-10-13 05:42:52,002 | INFO     | all data control threads have been joined
[2025-10-13 07:43:35] 2025-10-13 05:42:52,036 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:52,037 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:52,038 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:52,196 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:52,252 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:52,315 | INFO     | [job] control thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:52,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:43:35] 2025-10-13 05:42:52,493 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:52,523 | INFO     | [payload] control thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:52,974 | INFO     | [job] validate thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:53,007 | INFO     | [data] control thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:53,170 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:53,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:43:35] 2025-10-13 05:42:53,316 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:53,337 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:54,487 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:42:57,315 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:43:01,862 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:43:35] 2025-10-13 05:43:02,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:43:35] 2025-10-13 05:43:21,061 | INFO     | PID=3933628 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:43:35] 2025-10-13 05:43:21,061 | INFO     | .. there are 2 such processes running
[2025-10-13 07:43:35] 2025-10-13 05:43:21,061 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:43:35] 2025-10-13 05:43:21,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:43:35] 2025-10-13 05:43:21,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:43:35] 2025-10-13 05:43:29,103 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:43:35] 2025-10-13 05:43:30,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140299896719168)>', '<ExcThread(monitor, started 140299615569664)>']
[2025-10-13 07:43:35] 2025-10-13 05:43:31,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:43:35] 2025-10-13 05:43:31,107 | INFO     | [monitor] control thread has ended
[2025-10-13 07:43:35] 2025-10-13 05:43:35,379 | INFO     | all workflow threads have been joined
[2025-10-13 07:43:35] 2025-10-13 05:43:35,379 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:43:35] 2025-10-13 05:43:35,379 | INFO     | traces error code: 0
[2025-10-13 07:43:35] 2025-10-13 05:43:35,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:43:35] 2025-10-13 05:43:35,452 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:43:35] 2025-10-13 05:43:35,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:43:35] 2025-10-13 05:43:35,455 [wrapper] pilotpid: 3933628
[2025-10-13 07:43:35] 2025-10-13 05:43:35,456 [wrapper] Pilot exit status: 0
[2025-10-13 07:43:35] 2025-10-13 05:43:35,462 [wrapper] pandaids: 6838775049
[2025-10-13 07:43:35] 2025-10-13 05:43:35,478 [wrapper] cleanup supervisor_pilot 3981165 3933629
[2025-10-13 07:43:35] 2025-10-13 05:43:35,479 [wrapper] Test setup, not cleaning
[2025-10-13 07:43:35] 2025-10-13 05:43:35,481 [wrapper] apfmon messages muted
[2025-10-13 07:43:35] 2025-10-13 05:43:35,482 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:43:35] 2025-10-13 05:43:35,484 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:43:35]  *** Error codes and diagnostics ***
[2025-10-13 07:43:35]     "exeErrorCode": 0,
[2025-10-13 07:43:35]     "exeErrorDiag": "",
[2025-10-13 07:43:35]     "pilotErrorCode": 0,
[2025-10-13 07:43:35]     "pilotErrorDiag": "",
[2025-10-13 07:43:35]  *** Listing of results directory ***
[2025-10-13 07:43:35] insgesamt 409736
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc    557409 11. Okt 20:14 pilot3.tar.gz
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc      5112 11. Okt 20:29 queuedata.json
[2025-10-13 07:43:35] -rwx------ 1 boinc boinc     36292 11. Okt 20:30 runpilot2-wrapper.sh
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc       100 13. Okt 05:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:43:35] -rwxr-xr-x 1 boinc boinc      7986 13. Okt 05:37 run_atlas
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc       105 13. Okt 05:37 job.xml
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc      9785 13. Okt 05:37 init_data.xml
[2025-10-13 07:43:35] -rw-r--r-- 2 boinc boinc 220056088 13. Okt 05:37 EVNT.46676267._002521.pool.root.1
[2025-10-13 07:43:35] drwxrwx--x 2 boinc boinc      4096 13. Okt 05:37 shared
[2025-10-13 07:43:35] -rw-r--r-- 2 boinc boinc    569681 13. Okt 05:37 input.tar.gz
[2025-10-13 07:43:35] -rw-r--r-- 2 boinc boinc     15120 13. Okt 05:37 start_atlas.sh
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc         0 13. Okt 05:37 boinc_lockfile
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc      2550 13. Okt 05:37 pandaJob.out
[2025-10-13 07:43:35] -rw------- 1 boinc boinc    974373 13. Okt 05:37 agis_schedconf.cvmfs.json
[2025-10-13 07:43:35] -rw------- 1 boinc boinc   1560580 13. Okt 05:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:43:35] drwx------ 5 boinc boinc      4096 13. Okt 05:37 pilot3
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc       529 13. Okt 07:42 boinc_task_state.xml
[2025-10-13 07:43:35] -rw------- 1 boinc boinc 192799128 13. Okt 07:42 HITS.46676269._062737.pool.root.1
[2025-10-13 07:43:35] -rw------- 1 boinc boinc      1019 13. Okt 07:42 memory_monitor_summary.json
[2025-10-13 07:43:35] -rw------- 1 boinc boinc    307162 13. Okt 07:42 log.46676269._062737.job.log.tgz.1
[2025-10-13 07:43:35] -rw------- 1 boinc boinc      7761 13. Okt 07:42 heartbeat.json
[2025-10-13 07:43:35] -rw------- 1 boinc boinc        95 13. Okt 07:43 pilot_heartbeat.json
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc      8192 13. Okt 07:43 boinc_mmap_file
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc        27 13. Okt 07:43 wrapper_checkpoint.txt
[2025-10-13 07:43:35] -rw------- 1 boinc boinc      4896 13. Okt 07:43 pilotlog.txt
[2025-10-13 07:43:35] -rw------- 1 boinc boinc   1099574 13. Okt 07:43 log.46676269._062737.job.log.1
[2025-10-13 07:43:35] -rw------- 1 boinc boinc       357 13. Okt 07:43 output.list
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc       620 13. Okt 07:43 runtime_log
[2025-10-13 07:43:35] -rw------- 1 boinc boinc   1423360 13. Okt 07:43 result.tar.gz
[2025-10-13 07:43:35] -rw------- 1 boinc boinc       643 13. Okt 07:43 zNqLDmsXtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaGhNDmpRt1Zn.diag
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc      8668 13. Okt 07:43 runtime_log.err
[2025-10-13 07:43:35] -rw-r--r-- 1 boinc boinc     20935 13. Okt 07:43 stderr.txt
[2025-10-13 07:43:35] HITS file was successfully produced:
[2025-10-13 07:43:35] -rw------- 1 boinc boinc 192799128 13. Okt 07:42 shared/HITS.pool.root.1
[2025-10-13 07:43:35]  *** Contents of shared directory: ***
[2025-10-13 07:43:35] insgesamt 405156
[2025-10-13 07:43:35] -rw-r--r-- 2 boinc boinc 220056088 13. Okt 05:37 ATLAS.root_0
[2025-10-13 07:43:35] -rw-r--r-- 2 boinc boinc    569681 13. Okt 05:37 input.tar.gz
[2025-10-13 07:43:35] -rw-r--r-- 2 boinc boinc     15120 13. Okt 05:37 start_atlas.sh
[2025-10-13 07:43:35] -rw------- 1 boinc boinc 192799128 13. Okt 07:42 HITS.pool.root.1
[2025-10-13 07:43:35] -rw------- 1 boinc boinc   1423360 13. Okt 07:43 result.tar.gz
07:43:36 (3929930): run_atlas exited; CPU time 29119.400174
07:43:36 (3929930): called boinc_finish(0)

</stderr_txt>
]]>

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