Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:55:18 (1911392): wrapper (7.7.26015): starting
18:55:18 (1911392): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 18:55:18] Arguments: --nthreads 8
[2025-10-11 18:55:18] Threads: 8
[2025-10-11 18:55:18] Checking for CVMFS
[2025-10-11 18:55:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:55:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:55:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:55:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:55:21] 2.13.2.0 2533812 128429 318012 151599 0 624 16770372 32935937 45675 16776704 0 367695212 99.696 277794586 19917 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 18:55:21] CVMFS is ok
[2025-10-11 18:55:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:55:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:55:21] Further information can be found at the LHC@home message board.
[2025-10-11 18:55:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:55:21] Checking for apptainer binary...
[2025-10-11 18:55:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:55:21] Running /usr/bin/apptainer --version
[2025-10-11 18:55:21] apptainer version 1.4.3-1.el9
[2025-10-11 18:55:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:55:22] c6-12-29-3.aglt2.org
[2025-10-11 18:55:22] apptainer works
[2025-10-11 18:55:22] Set ATHENA_PROC_NUMBER=8
[2025-10-11 18:55:22] Set ATHENA_CORE_NUMBER=8
[2025-10-11 18:55:22] Starting ATLAS job with PandaID=6838773179
[2025-10-11 18:55:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:52:29]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:52:29] 2025-10-12 03:51:25,837 | INFO     | sum of deviations: 38580812735.23342
[2025-10-11 23:52:29] 2025-10-12 03:51:25,838 | INFO     | mean x: 1760232297.369338
[2025-10-11 23:52:29] 2025-10-12 03:51:25,838 | INFO     | mean y: 2076215.912891986
[2025-10-11 23:52:29] 2025-10-12 03:51:25,838 | INFO     | -- intersect: -9262261061.927757
[2025-10-11 23:52:29] 2025-10-12 03:51:25,838 | INFO     | intersect: -9262261061.927757
[2025-10-11 23:52:29] 2025-10-12 03:51:25,839 | INFO     | chi2: 4.66473851239266
[2025-10-11 23:52:29] 2025-10-12 03:51:25,910 | INFO     | sum of square deviations: 6953904710.145363
[2025-10-11 23:52:29] 2025-10-12 03:51:25,913 | INFO     | sum of deviations: 70564812519.67026
[2025-10-11 23:52:29] 2025-10-12 03:51:25,913 | INFO     | mean x: 1760232144.8687944
[2025-10-11 23:52:29] 2025-10-12 03:51:25,913 | INFO     | mean y: 2089054.8829787234
[2025-10-11 23:52:29] 2025-10-12 03:51:25,913 | INFO     | -- intersect: -17859882955.252182
[2025-10-11 23:52:29] 2025-10-12 03:51:25,913 | INFO     | intersect: -17859882955.252182
[2025-10-11 23:52:29] 2025-10-12 03:51:25,914 | INFO     | chi2: 3.339939376866801
[2025-10-11 23:52:29] 2025-10-12 03:51:25,914 | INFO     | current chi2=3.339939376866801 (change=28.40028721880782 %)
[2025-10-11 23:52:29] 2025-10-12 03:51:25,978 | INFO     | sum of square deviations: 6590519748.173291
[2025-10-11 23:52:29] 2025-10-12 03:51:25,980 | INFO     | sum of deviations: 71863241911.09018
[2025-10-11 23:52:29] 2025-10-12 03:51:25,980 | INFO     | mean x: 1760231992.364621
[2025-10-11 23:52:29] 2025-10-12 03:51:25,980 | INFO     | mean y: 2089588.3357400722
[2025-10-11 23:52:29] 2025-10-12 03:51:25,980 | INFO     | -- intersect: -19191537366.80694
[2025-10-11 23:52:29] 2025-10-12 03:51:25,980 | INFO     | intersect: -19191537366.80694
[2025-10-11 23:52:29] 2025-10-12 03:51:25,980 | INFO     | chi2: 3.3294204040761066
[2025-10-11 23:52:29] 2025-10-12 03:51:25,981 | INFO     | current chi2=3.3294204040761066 (change=0.3149450215639041 %)
[2025-10-11 23:52:29] 2025-10-12 03:51:25,981 | INFO     | right removable region: 276
[2025-10-11 23:52:29] 2025-10-12 03:51:26,050 | INFO     | sum of square deviations: 6953874820.656016
[2025-10-11 23:52:29] 2025-10-12 03:51:26,052 | INFO     | sum of deviations: -24293644146.812057
[2025-10-11 23:52:29] 2025-10-12 03:51:26,053 | INFO     | mean x: 1760232449.8758864
[2025-10-11 23:52:29] 2025-10-12 03:51:26,053 | INFO     | mean y: 2101621.7482269504
[2025-10-11 23:52:29] 2025-10-12 03:51:26,053 | INFO     | -- intersect: 6151545184.628159
[2025-10-11 23:52:29] 2025-10-12 03:51:26,053 | INFO     | intersect: 6151545184.628159
[2025-10-11 23:52:29] 2025-10-12 03:51:26,053 | INFO     | chi2: 2.0029485151934736
[2025-10-11 23:52:29] 2025-10-12 03:51:26,053 | INFO     | current chi2=2.0029485151934736 (change=57.061933699556675 %)
[2025-10-11 23:52:29] 2025-10-12 03:51:26,054 | INFO     | sum of square deviations: 6590494495.198575
[2025-10-11 23:52:29] 2025-10-12 03:51:26,097 | INFO     | sum of deviations: -48015392311.99279
[2025-10-11 23:52:29] 2025-10-12 03:51:26,097 | INFO     | mean x: 1760232602.3790615
[2025-10-11 23:52:29] 2025-10-12 03:51:26,097 | INFO     | mean y: 2111550.104693141
[2025-10-11 23:52:29] 2025-10-12 03:51:26,097 | INFO     | -- intersect: 12826378230.725609
[2025-10-11 23:52:29] 2025-10-12 03:51:26,098 | INFO     | intersect: 12826378230.725609
[2025-10-11 23:52:29] 2025-10-12 03:51:26,098 | INFO     | chi2: 1.5956845876184427
[2025-10-11 23:52:29] 2025-10-12 03:51:26,098 | INFO     | current chi2=1.5956845876184427 (change=20.333219974737666 %)
[2025-10-11 23:52:29] 2025-10-12 03:51:26,098 | INFO     | left removable region: 20
[2025-10-11 23:52:29] 2025-10-12 03:51:26,099 | INFO     | sum of square deviations: 5202303948.0
[2025-10-11 23:52:29] 2025-10-12 03:51:26,139 | INFO     | monitor loop #968: job 0:6838773179 is in state 'finished'
[2025-10-11 23:52:29] 2025-10-12 03:51:26,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:52:29] 2025-10-12 03:51:26,162 | INFO     | sum of deviations: -9109833034.875
[2025-10-11 23:52:29] 2025-10-12 03:51:26,163 | INFO     | mean x: 1760232571.875
[2025-10-11 23:52:29] 2025-10-12 03:51:26,163 | INFO     | mean y: 2124775.00390625
[2025-10-11 23:52:29] 2025-10-12 03:51:26,163 | INFO     | -- intersect: 3084494623.5581408
[2025-10-11 23:52:29] 2025-10-12 03:51:26,163 | INFO     | intersect: 3084494623.5581408
[2025-10-11 23:52:29] 2025-10-12 03:51:26,163 | INFO     | chi2: 0.11228777761948333
[2025-10-11 23:52:29] 2025-10-12 03:51:26,164 | INFO     | -- intersect: 3084494623.5581408
[2025-10-11 23:52:29] 2025-10-12 03:51:26,164 | INFO     | current memory leak: -1.75 B/s (using 256 data points, chi2=0.11)
[2025-10-11 23:52:29] 2025-10-12 03:51:26,164 | INFO     | could have reported an average CPU frequency of 2594 MHz (13 samples)
[2025-10-11 23:52:29] 2025-10-12 03:51:26,165 | INFO     | ..............................
[2025-10-11 23:52:29] 2025-10-12 03:51:26,165 | INFO     | . Timing measurements:
[2025-10-11 23:52:29] 2025-10-12 03:51:26,165 | INFO     | . get job = 0 s
[2025-10-11 23:52:29] 2025-10-12 03:51:26,165 | INFO     | . initial setup = 8 s
[2025-10-11 23:52:29] 2025-10-12 03:51:26,181 | INFO     | . payload setup = 48 s
[2025-10-11 23:52:29] 2025-10-12 03:51:26,181 | INFO     | . stage-in = 0 s
[2025-10-11 23:52:29] 2025-10-12 03:51:26,181 | INFO     | . payload execution = 17492 s
[2025-10-11 23:52:29] 2025-10-12 03:51:26,181 | INFO     | . stage-out = 8 s
[2025-10-11 23:52:29] 2025-10-12 03:51:26,182 | INFO     | . log creation = 1 s
[2025-10-11 23:52:29] 2025-10-12 03:51:26,182 | INFO     | ..............................
[2025-10-11 23:52:29] 2025-10-12 03:51:26,891 | INFO     | 
[2025-10-11 23:52:29] 2025-10-12 03:51:26,891 | INFO     | job summary report
[2025-10-11 23:52:29] 2025-10-12 03:51:26,891 | INFO     | --------------------------------------------------
[2025-10-11 23:52:29] 2025-10-12 03:51:26,891 | INFO     | PanDA job id: 6838773179
[2025-10-11 23:52:29] 2025-10-12 03:51:26,891 | INFO     | task id: 46676269
[2025-10-11 23:52:29] 2025-10-12 03:51:26,891 | INFO     | errors: (none)
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | pilot state: finished 
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | transexitcode: 0
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | exeerrorcode: 0
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | exeerrordiag: 
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | exitcode: 0
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | exitmsg: OK
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | cpuconsumptiontime: 44981 s
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | nevents: 400
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | neventsw: 0
[2025-10-11 23:52:29] 2025-10-12 03:51:26,892 | INFO     | pid: 1939535
[2025-10-11 23:52:29] 2025-10-12 03:51:26,893 | INFO     | pgrp: 1939535
[2025-10-11 23:52:29] 2025-10-12 03:51:26,893 | INFO     | corecount: 8
[2025-10-11 23:52:29] 2025-10-12 03:51:26,893 | INFO     | event service: False
[2025-10-11 23:52:29] 2025-10-12 03:51:26,893 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 3: 2348913, 14: 2348941, 25: 2348969, 36: 2349125, 40: 2349415, 48: 2349443, 17546: 2381326, 17547: 2381325, 17556: 239
[2025-10-11 23:52:29] 2025-10-12 03:51:26,893 | INFO     | --------------------------------------------------
[2025-10-11 23:52:29] 2025-10-12 03:51:26,893 | INFO     | 
[2025-10-11 23:52:29] 2025-10-12 03:51:26,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 23:52:29] 2025-10-12 03:51:26,996 | INFO     | time since job start (17678s) is within the limit (172800.0s)
[2025-10-11 23:52:29] 2025-10-12 03:51:27,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,115 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,115 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:52:29] 2025-10-12 03:51:27,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:52:29] 2025-10-12 03:51:27,117 | INFO     | job 6838773179 has completed (purged errors)
[2025-10-11 23:52:29] 2025-10-12 03:51:27,117 | INFO     | overall cleanup function is called
[2025-10-11 23:52:29] 2025-10-12 03:51:28,265 | INFO     | --- collectZombieJob: --- 10, [1939535]
[2025-10-11 23:52:29] 2025-10-12 03:51:28,265 | INFO     | zombie collector waiting for pid 1939535
[2025-10-11 23:52:29] 2025-10-12 03:51:28,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:52:29] 2025-10-12 03:51:28,265 | INFO     | collected zombie processes
[2025-10-11 23:52:29] 2025-10-12 03:51:28,265 | INFO     | will attempt to kill all subprocesses of pid=1939535
[2025-10-11 23:52:29] 2025-10-12 03:51:33,008 | INFO     | PID=1919892 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 23:52:29] 2025-10-12 03:51:33,008 | INFO     | .. there are 55 such processes running
[2025-10-11 23:52:29] 2025-10-12 03:51:33,065 | INFO     | process IDs to be killed: [1939535] (in reverse order)
[2025-10-11 23:52:29] 2025-10-12 03:51:33,289 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:52:29] 2025-10-12 03:51:33,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:52:29] 2025-10-12 03:51:33,333 | INFO     | did not find any defunct processes belonging to 1939535
[2025-10-11 23:52:29] 2025-10-12 03:51:33,565 | INFO     | did not find any defunct processes belonging to 1939535
[2025-10-11 23:52:29] 2025-10-12 03:51:33,565 | INFO     | ready for new job
[2025-10-11 23:52:29] 2025-10-12 03:51:33,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:52:29] 2025-10-12 03:51:33,568 | INFO     | ***************************************
[2025-10-11 23:52:29] 2025-10-12 03:51:33,616 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:52:29] 2025-10-12 03:51:33,616 | INFO     | ***************************************
[2025-10-11 23:52:29] 2025-10-12 03:51:33,616 | INFO     | 
[2025-10-11 23:52:29] 2025-10-12 03:51:33,729 | INFO     | architecture information:
[2025-10-11 23:52:29] 2025-10-12 03:51:33,783 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:52:29] 2025-10-12 03:51:33,949 | INFO     | cat /etc/os-release:
[2025-10-11 23:52:29] NAME="CentOS Linux"
[2025-10-11 23:52:29] VERSION="7 (Core)"
[2025-10-11 23:52:29] ID="centos"
[2025-10-11 23:52:29] ID_LIKE="rhel fedora"
[2025-10-11 23:52:29] VERSION_ID="7"
[2025-10-11 23:52:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:52:29] ANSI_COLOR="0;31"
[2025-10-11 23:52:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:52:29] HOME_URL="https://www.centos.org/"
[2025-10-11 23:52:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:52:29] 
[2025-10-11 23:52:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:52:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:52:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:52:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:52:29] 
[2025-10-11 23:52:29] 2025-10-12 03:51:33,950 | INFO     | ***************************************
[2025-10-11 23:52:29] 2025-10-12 03:51:34,453 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 23:52:29] 2025-10-12 03:51:34,574 | INFO     | sufficient remaining disk space (94044684288 B)
[2025-10-11 23:52:29] 2025-10-12 03:51:34,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:52:29] 2025-10-12 03:51:34,575 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:52:29] 2025-10-12 03:51:34,575 | INFO     | update_server=False
[2025-10-11 23:52:29] 2025-10-12 03:51:34,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:52:29] 2025-10-12 03:51:34,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:52:29] 2025-10-12 03:51:34,767 | INFO     | all data control threads have been joined
[2025-10-11 23:52:29] 2025-10-12 03:51:34,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:52:29] 2025-10-12 03:51:34,886 | INFO     | aborting loop
[2025-10-11 23:52:29] 2025-10-12 03:51:35,307 | INFO     | all job control threads have been joined
[2025-10-11 23:52:29] 2025-10-12 03:51:35,581 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:35,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:52:29] 2025-10-12 03:51:35,725 | INFO     | all payload control threads have been joined
[2025-10-11 23:52:29] 2025-10-12 03:51:35,776 | INFO     | [data] control thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:35,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:35,867 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:35,895 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:36,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:52:29] 2025-10-12 03:51:36,066 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:36,313 | INFO     | [job] control thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:36,394 | INFO     | [job] validate thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:36,572 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:36,611 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:36,625 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:36,626 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:36,732 | INFO     | [payload] control thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:37,063 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:37,070 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:51:39,593 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:52:29] 2025-10-12 03:52:07,474 | INFO     | PID=1919892 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 23:52:29] 2025-10-12 03:52:07,474 | INFO     | .. there are 55 such processes running
[2025-10-11 23:52:29] 2025-10-12 03:52:07,478 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:52:29] 2025-10-12 03:52:07,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:52:29] 2025-10-12 03:52:07,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:52:29] 2025-10-12 03:52:19,594 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:52:29] 2025-10-12 03:52:20,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139805263783744)>', '<ExcThread(monitor, started 139804465424128)>']
[2025-10-11 23:52:29] 2025-10-12 03:52:21,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:52:29] 2025-10-12 03:52:21,622 | INFO     | [monitor] control thread has ended
[2025-10-11 23:52:29] 2025-10-12 03:52:25,986 | INFO     | all workflow threads have been joined
[2025-10-11 23:52:29] 2025-10-12 03:52:25,986 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:52:29] 2025-10-12 03:52:25,987 | INFO     | traces error code: 0
[2025-10-11 23:52:29] 2025-10-12 03:52:25,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:52:29] 2025-10-12 03:52:27,475 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:52:29] 2025-10-12 03:52:27,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:52:29] 2025-10-12 03:52:27,528 [wrapper] pilotpid: 1919892
[2025-10-11 23:52:29] 2025-10-12 03:52:27,625 [wrapper] Pilot exit status: 0
[2025-10-11 23:52:29] 2025-10-12 03:52:27,734 [wrapper] pandaids: 6838773179
[2025-10-11 23:52:29] 2025-10-12 03:52:28,171 [wrapper] cleanup supervisor_pilot 2961908 1919893
[2025-10-11 23:52:29] 2025-10-12 03:52:28,199 [wrapper] Test setup, not cleaning
[2025-10-11 23:52:29] 2025-10-12 03:52:28,230 [wrapper] apfmon messages muted
[2025-10-11 23:52:29] 2025-10-12 03:52:28,289 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:52:29] 2025-10-12 03:52:28,319 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:52:29]  *** Error codes and diagnostics ***
[2025-10-11 23:52:29]     "exeErrorCode": 0,
[2025-10-11 23:52:29]     "exeErrorDiag": "",
[2025-10-11 23:52:29]     "pilotErrorCode": 0,
[2025-10-11 23:52:29]     "pilotErrorDiag": "",
[2025-10-11 23:52:29]  *** Listing of results directory ***
[2025-10-11 23:52:29] total 413016
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:27 queuedata.json
[2025-10-11 23:52:29] -rwx------. 1 boincer umatlas     36292 Oct 11 14:28 runpilot2-wrapper.sh
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas       100 Oct 11 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:52:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 18:55 run_atlas
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas       105 Oct 11 18:55 job.xml
[2025-10-11 23:52:29] -rw-r--r--. 2 boincer umatlas 220533481 Oct 11 18:55 EVNT.46676267._002515.pool.root.1
[2025-10-11 23:52:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:55 start_atlas.sh
[2025-10-11 23:52:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 18:55 shared
[2025-10-11 23:52:29] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 18:55 input.tar.gz
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas         0 Oct 11 18:55 boinc_lockfile
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 18:55 pandaJob.out
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas    975520 Oct 11 18:56 agis_schedconf.cvmfs.json
[2025-10-11 23:52:29] drwx------. 5 boincer umatlas      4096 Oct 11 18:56 pilot3
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas 193408727 Oct 11 23:48 HITS.46676269._062609.pool.root.1
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas       531 Oct 11 23:48 boinc_task_state.xml
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas      6861 Oct 11 23:49 init_data.xml
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas      1045 Oct 11 23:50 memory_monitor_summary.json
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas   1560580 Oct 11 23:50 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas    485795 Oct 11 23:50 log.46676269._062609.job.log.tgz.1
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas      7848 Oct 11 23:51 heartbeat.json
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas        95 Oct 11 23:52 pilot_heartbeat.json
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas        28 Oct 11 23:52 wrapper_checkpoint.txt
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas      4824 Oct 11 23:52 pilotlog.txt
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas   2058383 Oct 11 23:52 log.46676269._062609.job.log.1
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas       357 Oct 11 23:52 output.list
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas       620 Oct 11 23:52 runtime_log
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas   2560000 Oct 11 23:52 result.tar.gz
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 23:52 boinc_mmap_file
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 23:52 runtime_log.err
[2025-10-11 23:52:29] -rw-------. 1 boincer umatlas       659 Oct 11 23:52 oWMODmuVtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfFhNDmOntr4n.diag
[2025-10-11 23:52:29] -rw-r--r--. 1 boincer umatlas     21229 Oct 11 23:52 stderr.txt
[2025-10-11 23:52:50] HITS file was successfully produced:
[2025-10-11 23:52:50] -rw-------. 1 boincer umatlas 193408727 Oct 11 23:48 shared/HITS.pool.root.1
[2025-10-11 23:52:50]  *** Contents of shared directory: ***
[2025-10-11 23:52:50] total 407324
[2025-10-11 23:52:50] -rw-r--r--. 2 boincer umatlas 220533481 Oct 11 18:55 ATLAS.root_0
[2025-10-11 23:52:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:55 start_atlas.sh
[2025-10-11 23:52:50] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 18:55 input.tar.gz
[2025-10-11 23:52:50] -rw-------. 1 boincer umatlas 193408727 Oct 11 23:48 HITS.pool.root.1
[2025-10-11 23:52:50] -rw-------. 1 boincer umatlas   2560000 Oct 11 23:52 result.tar.gz
23:52:51 (1911392): run_atlas exited; CPU time 45958.862884
23:52:51 (1911392): called boinc_finish(0)

</stderr_txt>
]]>

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