Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:17:43 (3879176): wrapper (7.7.26015): starting
14:17:43 (3879176): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 14:17:43] Arguments: --nthreads 12
[2025-10-11 14:17:43] Threads: 12
[2025-10-11 14:17:43] Checking for CVMFS
[2025-10-11 14:17:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:17:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:17:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:17:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:17:45] 2.11.5.0 2842 30544 215628 151595 3 608 36848183 45568000 23583 130560 0 319129215 99.862 140966278 25020 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 14:17:45] CVMFS is ok
[2025-10-11 14:17:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:17:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:17:45] Further information can be found at the LHC@home message board.
[2025-10-11 14:17:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:17:45] Checking for apptainer binary...
[2025-10-11 14:17:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:17:45] Running /usr/bin/apptainer --version
[2025-10-11 14:17:45] apptainer version 1.4.1-1.el9
[2025-10-11 14:17:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:17:45] wns0075.triumf.lcg
[2025-10-11 14:17:45] apptainer works
[2025-10-11 14:17:46] Set ATHENA_PROC_NUMBER=12
[2025-10-11 14:17:46] Set ATHENA_CORE_NUMBER=12
[2025-10-11 14:17:46] Starting ATLAS job with PandaID=6838773165
[2025-10-11 14:17:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 14:24:32]  *** The last 200 lines of the pilot log: ***
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | WARNING  | wrong length of table data, x=[1760217622.0, 1760217683.0], y=[2170.0, 388939.0] (must be same and length>=4)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | could have reported an average CPU frequency of 2578 MHz (4 samples)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | ..............................
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . Timing measurements:
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . get job = 0 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . initial setup = 5 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . payload setup = 35 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . stage-in = 0 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . payload execution = 88 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . stage-out = 1 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | . log creation = 0 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | ..............................
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838773165/pilotlog.txt
[2025-10-11 14:24:32] 2025-10-11 21:23:44,199 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 14:24:32] - Log from pilotlog.txt -
[2025-10-11 14:24:32] 2025-10-11 21:23:44,113 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838773165/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | INFO     | extracted standard info from prmon json
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | WARNING  | wrong length of table data, x=[1760217622.0, 1760217683.0], y=[2170.0, 388939.0] (must be same and length>=4)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | could have reported an average CPU frequency of 2578 MHz (4 samples)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | ..............................
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . Timing measurements:
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . get job = 0 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . initial setup = 5 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . payload setup = 35 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . stage-in = 0 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . payload execution = 88 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . stage-out = 1 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | . log creation = 0 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | ..............................
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838773165/pilotlog.txt
[2025-10-11 14:24:32] 2025-10-11 21:23:44,200 | WARNING  | 
[2025-10-11 14:24:32] [begin log extracts]
[2025-10-11 14:24:32] - Log from pilotlog.txt -
[2025-10-11 14:24:32] 2025-10-11 21:23:44,113 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838773165/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | INFO     | extracted standard info from prmon json
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:24:32] 2025-10-11 21:23:44,126 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | WARNING  | wrong length of table data, x=[1760217622.0, 1760217683.0], y=[2170.0, 388939.0] (must be same and length>=4)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | could have reported an average CPU frequency of 2578 MHz (4 samples)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | ..............................
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . Timing measurements:
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . get job = 0 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . initial setup = 5 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . payload setup = 35 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . stage-in = 0 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . payload execution = 88 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,127 | INFO     | . stage-out = 1 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | . log creation = 0 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | ..............................
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 14:24:32] 2025-10-11 21:23:44,128 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838773165/pilotlog.txt
[2025-10-11 14:24:32] [end log extracts]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,200 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,200 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 14:24:32] 2025-10-11 21:23:44,294 | INFO     | time since job start (318s) is within the limit (172800.0s)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,764 | INFO     | 
[2025-10-11 14:24:32] 2025-10-11 21:23:44,764 | INFO     | job summary report
[2025-10-11 14:24:32] 2025-10-11 21:23:44,764 | INFO     | --------------------------------------------------
[2025-10-11 14:24:32] 2025-10-11 21:23:44,764 | INFO     | PanDA job id: 6838773165
[2025-10-11 14:24:32] 2025-10-11 21:23:44,764 | INFO     | task id: 46676269
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 14:21:19,456 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | pilot state: failed 
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | transexitcode: 65
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | exeerrorcode: 65
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | exitcode: 65
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | cpuconsumptiontime: 21 s
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | nevents: 0
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | neventsw: 0
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | pid: 3897395
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | pgrp: 3897395
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | corecount: 12
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | event service: False
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | sizes: {0: 2348683, 1: 2348882, 12: 2348882, 22: 2348910, 29: 2349200, 33: 2349228, 128: 2372674, 130: 2376966, 132: 2376994, 262: 2377160}
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | --------------------------------------------------
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | 
[2025-10-11 14:24:32] 2025-10-11 21:23:44,765 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 14:24:32] 2025-10-11 21:23:44,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 14:24:32] 2025-10-11 21:23:44,814 | INFO     | job 6838773165 has completed (purged errors)
[2025-10-11 14:24:32] 2025-10-11 21:23:44,814 | INFO     | overall cleanup function is called
[2025-10-11 14:24:32] 2025-10-11 21:23:45,819 | INFO     | --- collectZombieJob: --- 10, [3897395]
[2025-10-11 14:24:32] 2025-10-11 21:23:45,820 | INFO     | zombie collector waiting for pid 3897395
[2025-10-11 14:24:32] 2025-10-11 21:23:45,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 14:24:32] 2025-10-11 21:23:45,820 | INFO     | collected zombie processes
[2025-10-11 14:24:32] 2025-10-11 21:23:45,820 | INFO     | will attempt to kill all subprocesses of pid=3897395
[2025-10-11 14:24:32] 2025-10-11 21:23:46,137 | INFO     | process IDs to be killed: [3897395] (in reverse order)
[2025-10-11 14:24:32] 2025-10-11 21:23:46,355 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 14:24:32] 2025-10-11 21:23:46,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 14:24:32] 2025-10-11 21:23:46,375 | INFO     | did not find any defunct processes belonging to 3897395
[2025-10-11 14:24:32] 2025-10-11 21:23:46,398 | INFO     | did not find any defunct processes belonging to 3897395
[2025-10-11 14:24:32] 2025-10-11 21:23:46,398 | INFO     | ready for new job
[2025-10-11 14:24:32] 2025-10-11 21:23:46,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 14:24:32] 2025-10-11 21:23:46,400 | INFO     | ***************************************
[2025-10-11 14:24:32] 2025-10-11 21:23:46,400 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 14:24:32] 2025-10-11 21:23:46,400 | INFO     | ***************************************
[2025-10-11 14:24:32] 2025-10-11 21:23:46,400 | INFO     | 
[2025-10-11 14:24:32] 2025-10-11 21:23:46,402 | INFO     | architecture information:
[2025-10-11 14:24:32] 2025-10-11 21:23:46,405 | INFO     | executing command: cat /etc/os-release
[2025-10-11 14:24:32] 2025-10-11 21:23:46,435 | INFO     | cat /etc/os-release:
[2025-10-11 14:24:32] NAME="CentOS Linux"
[2025-10-11 14:24:32] VERSION="7 (Core)"
[2025-10-11 14:24:32] ID="centos"
[2025-10-11 14:24:32] ID_LIKE="rhel fedora"
[2025-10-11 14:24:32] VERSION_ID="7"
[2025-10-11 14:24:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 14:24:32] ANSI_COLOR="0;31"
[2025-10-11 14:24:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 14:24:32] HOME_URL="https://www.centos.org/"
[2025-10-11 14:24:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 14:24:32] 
[2025-10-11 14:24:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 14:24:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 14:24:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 14:24:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 14:24:32] 
[2025-10-11 14:24:32] 2025-10-11 21:23:46,436 | INFO     | ***************************************
[2025-10-11 14:24:32] 2025-10-11 21:23:46,939 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 14:24:32] 2025-10-11 21:23:46,966 | INFO     | sufficient remaining disk space (1829694865408 B)
[2025-10-11 14:24:32] 2025-10-11 21:23:46,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 14:24:32] 2025-10-11 21:23:46,967 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 14:24:32] 2025-10-11 21:23:46,967 | INFO     | update_server=False
[2025-10-11 14:24:32] 2025-10-11 21:23:46,967 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 14:24:32] 2025-10-11 21:23:46,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 14:24:32] 2025-10-11 21:23:46,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:24:32] 2025-10-11 21:23:46,970 | INFO     | aborting loop
[2025-10-11 14:24:32] 2025-10-11 21:23:47,178 | INFO     | all job control threads have been joined
[2025-10-11 14:24:32] 2025-10-11 21:23:47,672 | INFO     | all payload control threads have been joined
[2025-10-11 14:24:32] 2025-10-11 21:23:47,976 | INFO     | [job] job monitor thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:47,981 | INFO     | [job] retrieve thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:47,988 | INFO     | all data control threads have been joined
[2025-10-11 14:24:32] 2025-10-11 21:23:48,011 | INFO     | [payload] failed_post thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:48,189 | INFO     | [job] control thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:48,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 14:24:32] 2025-10-11 21:23:48,678 | INFO     | [payload] control thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:48,878 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:48,886 | INFO     | [job] validate thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:48,940 | INFO     | [data] copytool_in thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:48,994 | INFO     | [data] control thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:49,058 | INFO     | [payload] validate_post thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:49,361 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:49,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:49,398 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:49,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:24:32] 2025-10-11 21:23:50,229 | INFO     | [data] copytool_out thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:50,417 | INFO     | [job] queue monitor thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:23:50,981 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 14:24:32] 2025-10-11 21:24:17,779 | INFO     | PID=3883001 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 14:24:32] 2025-10-11 21:24:17,780 | INFO     | .. there are 41 such processes running
[2025-10-11 14:24:32] 2025-10-11 21:24:17,780 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 14:24:32] 2025-10-11 21:24:17,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 14:24:32] 2025-10-11 21:24:17,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 14:24:32] 2025-10-11 21:24:26,040 | INFO     | [monitor] cgroup control has ended
[2025-10-11 14:24:32] 2025-10-11 21:24:26,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708437411648)>', '<ExcThread(monitor, started 140708117714688)>']
[2025-10-11 14:24:32] 2025-10-11 21:24:26,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 14:24:32] 2025-10-11 21:24:26,848 | INFO     | [monitor] control thread has ended
[2025-10-11 14:24:32] 2025-10-11 21:24:31,553 | INFO     | all workflow threads have been joined
[2025-10-11 14:24:32] 2025-10-11 21:24:31,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 14:24:32] 2025-10-11 21:24:31,554 | INFO     | traces error code: 0
[2025-10-11 14:24:32] 2025-10-11 21:24:31,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 14:24:32] 2025-10-11 21:24:31,787 [wrapper] ==== pilot stdout END ====
[2025-10-11 14:24:32] 2025-10-11 21:24:31,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 14:24:32] 2025-10-11 21:24:31,800 [wrapper] pilotpid: 3883001
[2025-10-11 14:24:32] 2025-10-11 21:24:31,802 [wrapper] Pilot exit status: 0
[2025-10-11 14:24:32] 2025-10-11 21:24:31,844 [wrapper] pandaids: 6838773165
[2025-10-11 14:24:32] 2025-10-11 21:24:31,952 [wrapper] cleanup supervisor_pilot 3883007 3883002
[2025-10-11 14:24:32] 2025-10-11 21:24:31,956 [wrapper] Test setup, not cleaning
[2025-10-11 14:24:32] 2025-10-11 21:24:31,958 [wrapper] apfmon messages muted
[2025-10-11 14:24:32] 2025-10-11 21:24:31,971 [wrapper] ==== wrapper stdout END ====
[2025-10-11 14:24:32] 2025-10-11 21:24:31,980 [wrapper] ==== wrapper stderr END ====
[2025-10-11 14:24:32]  *** Error codes and diagnostics ***
[2025-10-11 14:24:32]     "exeErrorCode": 65,
[2025-10-11 14:24:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 14:24:32]     "pilotErrorCode": 1305,
[2025-10-11 14:24:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 14:24:32]  *** Listing of results directory ***
[2025-10-11 14:24:32] total 218132
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc    557409 Oct 11 11:14 pilot3.tar.gz
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc      5112 Oct 11 11:25 queuedata.json
[2025-10-11 14:24:32] -rwx------. 1 boinc boinc     36292 Oct 11 11:25 runpilot2-wrapper.sh
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc       100 Oct 11 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 14:24:32] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 14:17 run_atlas
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc       105 Oct 11 14:17 job.xml
[2025-10-11 14:24:32] -rw-r--r--. 2 boinc boinc 219220331 Oct 11 14:17 EVNT.46676267._002514.pool.root.1
[2025-10-11 14:24:32] -rw-r--r--. 2 boinc boinc     15120 Oct 11 14:17 start_atlas.sh
[2025-10-11 14:24:32] drwxrwx--x. 2 boinc boinc      4096 Oct 11 14:17 shared
[2025-10-11 14:24:32] -rw-r--r--. 2 boinc boinc    569683 Oct 11 14:17 input.tar.gz
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc      6593 Oct 11 14:17 init_data.xml
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc         0 Oct 11 14:17 boinc_lockfile
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc      2550 Oct 11 14:17 pandaJob.out
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc    975528 Oct 11 14:18 agis_schedconf.cvmfs.json
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc   1560580 Oct 11 14:18 agis_ddmendpoints.agis.ALL.json
[2025-10-11 14:24:32] drwx------. 5 boinc boinc      4096 Oct 11 14:18 pilot3
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc       524 Oct 11 14:21 boinc_task_state.xml
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc       988 Oct 11 14:21 memory_monitor_summary.json
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc     22828 Oct 11 14:21 log.46676269._062595.job.log.tgz.1
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc        95 Oct 11 14:23 pilot_heartbeat.json
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc      8418 Oct 11 14:23 heartbeat.json
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc      8192 Oct 11 14:24 boinc_mmap_file
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc        23 Oct 11 14:24 wrapper_checkpoint.txt
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc      4823 Oct 11 14:24 pilotlog.txt
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc     98098 Oct 11 14:24 log.46676269._062595.job.log.1
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc       188 Oct 11 14:24 output.list
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc       620 Oct 11 14:24 runtime_log
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc    143360 Oct 11 14:24 result.tar.gz
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc       647 Oct 11 14:24 vLANDmyStR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHMSMDmqP2WSo.diag
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc      8528 Oct 11 14:24 runtime_log.err
[2025-10-11 14:24:32] -rw-r--r--. 1 boinc boinc     21911 Oct 11 14:24 stderr.txt
[2025-10-11 14:24:32] No HITS result produced
[2025-10-11 14:24:32]  *** Contents of shared directory: ***
[2025-10-11 14:24:32] total 214804
[2025-10-11 14:24:32] -rw-r--r--. 2 boinc boinc 219220331 Oct 11 14:17 ATLAS.root_0
[2025-10-11 14:24:32] -rw-r--r--. 2 boinc boinc     15120 Oct 11 14:17 start_atlas.sh
[2025-10-11 14:24:32] -rw-r--r--. 2 boinc boinc    569683 Oct 11 14:17 input.tar.gz
[2025-10-11 14:24:32] -rw-------. 1 boinc boinc    143360 Oct 11 14:24 result.tar.gz
14:24:34 (3879176): run_atlas exited; CPU time 33.468438
14:24:34 (3879176): called boinc_finish(0)

</stderr_txt>
]]>

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