Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:40:09 (86222): wrapper (7.7.26015): starting
13:40:09 (86222): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 13:40:09] Arguments: --nthreads 12
[2025-10-11 13:40:09] Threads: 12
[2025-10-11 13:40:09] Checking for CVMFS
[2025-10-11 13:40:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:40:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:40:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:40:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:40:12] 2.11.5.0 2072 30177 223344 151595 2 379 38734957 45568001 22397 130560 0 216176171 99.858 99068549 25133 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 13:40:12] CVMFS is ok
[2025-10-11 13:40:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:40:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:40:12] Further information can be found at the LHC@home message board.
[2025-10-11 13:40:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:40:12] Checking for apptainer binary...
[2025-10-11 13:40:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:40:12] Running /usr/bin/apptainer --version
[2025-10-11 13:40:12] apptainer version 1.4.1-1.el9
[2025-10-11 13:40:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:40:13] wns0042.triumf.lcg
[2025-10-11 13:40:13] apptainer works
[2025-10-11 13:40:13] Set ATHENA_PROC_NUMBER=12
[2025-10-11 13:40:13] Set ATHENA_CORE_NUMBER=12
[2025-10-11 13:40:13] Starting ATLAS job with PandaID=6838773099
[2025-10-11 13:40:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:47:19]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | WARNING  | wrong length of table data, x=[1760215394.0], y=[934.0] (must be same and length>=4)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | INFO     | could have reported an average CPU frequency of 1450 MHz (4 samples)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | INFO     | ..............................
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . Timing measurements:
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . get job = 0 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . initial setup = 4 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . payload setup = 32 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . stage-in = 1 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . payload execution = 88 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . stage-out = 1 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . log creation = 0 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | ..............................
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 13:47:19] 2025-10-11 20:46:44,176 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838773099/pilotlog.txt
[2025-10-11 13:47:19] 2025-10-11 20:46:44,251 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 13:47:19] - Log from pilotlog.txt -
[2025-10-11 13:47:19] 2025-10-11 20:46:44,172 | INFO     | extracted standard info from prmon json
[2025-10-11 13:47:19] 2025-10-11 20:46:44,172 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:47:19] 2025-10-11 20:46:44,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:47:19] 2025-10-11 20:46:44,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:47:19] 2025-10-11 20:46:44,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | WARNING  | wrong length of table data, x=[1760215394.0], y=[934.0] (must be same and length>=4)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | INFO     | could have reported an average CPU frequency of 1450 MHz (4 samples)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | INFO     | ..............................
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . Timing measurements:
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . get job = 0 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . initial setup = 4 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . payload setup = 32 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . stage-in = 1 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . payload execution = 88 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . stage-out = 1 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . log creation = 0 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | ..............................
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 13:47:19] 2025-10-11 20:46:44,176 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838773099/pilotlog.txt
[2025-10-11 13:47:19] 2025-10-11 20:46:44,252 | WARNING  | 
[2025-10-11 13:47:19] [begin log extracts]
[2025-10-11 13:47:19] - Log from pilotlog.txt -
[2025-10-11 13:47:19] 2025-10-11 20:46:44,172 | INFO     | extracted standard info from prmon json
[2025-10-11 13:47:19] 2025-10-11 20:46:44,172 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:47:19] 2025-10-11 20:46:44,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:47:19] 2025-10-11 20:46:44,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:47:19] 2025-10-11 20:46:44,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | WARNING  | wrong length of table data, x=[1760215394.0], y=[934.0] (must be same and length>=4)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | INFO     | could have reported an average CPU frequency of 1450 MHz (4 samples)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-10-11 13:47:19] 2025-10-11 20:46:44,174 | INFO     | ..............................
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . Timing measurements:
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . get job = 0 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . initial setup = 4 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . payload setup = 32 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . stage-in = 1 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . payload execution = 88 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . stage-out = 1 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | . log creation = 0 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | ..............................
[2025-10-11 13:47:19] 2025-10-11 20:46:44,175 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 13:47:19] 2025-10-11 20:46:44,176 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838773099/pilotlog.txt
[2025-10-11 13:47:19] [end log extracts]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,252 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,253 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 13:47:19] 2025-10-11 20:46:44,709 | INFO     | 
[2025-10-11 13:47:19] 2025-10-11 20:46:44,709 | INFO     | job summary report
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | --------------------------------------------------
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | PanDA job id: 6838773099
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | task id: 46676269
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 13:43:59,578 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | pilot state: failed 
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | transexitcode: 65
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | exeerrorcode: 65
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,710 | INFO     | exitcode: 65
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | cpuconsumptiontime: 30 s
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | nevents: 0
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | neventsw: 0
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | pid: 105408
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | pgrp: 105408
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | corecount: 12
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | event service: False
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | sizes: {0: 2348683, 1: 2348711, 2: 2348910, 3: 2348910, 14: 2348938, 25: 2348966, 28: 2349384, 36: 2349412, 126: 2372613, 127: 2372589, 130: 2376909, 132: 2377217,
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | --------------------------------------------------
[2025-10-11 13:47:19] 2025-10-11 20:46:44,711 | INFO     | 
[2025-10-11 13:47:19] 2025-10-11 20:46:44,712 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 13:47:19] 2025-10-11 20:46:44,779 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,779 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,779 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,779 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,780 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,780 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,780 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,780 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,780 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,780 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,781 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,781 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,781 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,781 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,781 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,788 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,788 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:47:19] 2025-10-11 20:46:44,789 | INFO     | job 6838773099 has completed (purged errors)
[2025-10-11 13:47:19] 2025-10-11 20:46:44,789 | INFO     | overall cleanup function is called
[2025-10-11 13:47:19] 2025-10-11 20:46:45,796 | INFO     | --- collectZombieJob: --- 10, [105408]
[2025-10-11 13:47:19] 2025-10-11 20:46:45,796 | INFO     | zombie collector waiting for pid 105408
[2025-10-11 13:47:19] 2025-10-11 20:46:45,797 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:47:19] 2025-10-11 20:46:45,797 | INFO     | collected zombie processes
[2025-10-11 13:47:19] 2025-10-11 20:46:45,797 | INFO     | will attempt to kill all subprocesses of pid=105408
[2025-10-11 13:47:19] 2025-10-11 20:46:46,413 | INFO     | process IDs to be killed: [105408] (in reverse order)
[2025-10-11 13:47:19] 2025-10-11 20:46:46,743 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:47:19] 2025-10-11 20:46:46,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:47:19] 2025-10-11 20:46:46,759 | INFO     | did not find any defunct processes belonging to 105408
[2025-10-11 13:47:19] 2025-10-11 20:46:46,776 | INFO     | did not find any defunct processes belonging to 105408
[2025-10-11 13:47:19] 2025-10-11 20:46:46,777 | INFO     | ready for new job
[2025-10-11 13:47:19] 2025-10-11 20:46:46,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:47:19] 2025-10-11 20:46:46,783 | INFO     | ***************************************
[2025-10-11 13:47:19] 2025-10-11 20:46:46,783 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:47:19] 2025-10-11 20:46:46,783 | INFO     | ***************************************
[2025-10-11 13:47:19] 2025-10-11 20:46:46,783 | INFO     | 
[2025-10-11 13:47:19] 2025-10-11 20:46:46,789 | INFO     | architecture information:
[2025-10-11 13:47:19] 2025-10-11 20:46:46,794 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:47:19] 2025-10-11 20:46:46,844 | INFO     | cat /etc/os-release:
[2025-10-11 13:47:19] NAME="CentOS Linux"
[2025-10-11 13:47:19] VERSION="7 (Core)"
[2025-10-11 13:47:19] ID="centos"
[2025-10-11 13:47:19] ID_LIKE="rhel fedora"
[2025-10-11 13:47:19] VERSION_ID="7"
[2025-10-11 13:47:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:47:19] ANSI_COLOR="0;31"
[2025-10-11 13:47:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:47:19] HOME_URL="https://www.centos.org/"
[2025-10-11 13:47:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:47:19] 
[2025-10-11 13:47:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:47:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:47:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:47:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:47:19] 
[2025-10-11 13:47:19] 2025-10-11 20:46:46,845 | INFO     | ***************************************
[2025-10-11 13:47:19] 2025-10-11 20:46:47,351 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 13:47:19] 2025-10-11 20:46:47,370 | INFO     | sufficient remaining disk space (1928722382848 B)
[2025-10-11 13:47:19] 2025-10-11 20:46:47,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:47:19] 2025-10-11 20:46:47,371 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:47:19] 2025-10-11 20:46:47,371 | INFO     | update_server=False
[2025-10-11 13:47:19] 2025-10-11 20:46:47,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:47:19] 2025-10-11 20:46:47,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:47:19] 2025-10-11 20:46:47,531 | INFO     | all payload control threads have been joined
[2025-10-11 13:47:19] 2025-10-11 20:46:47,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:47:19] 2025-10-11 20:46:47,736 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 13:47:19] 2025-10-11 20:46:47,736 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 13:47:19] 2025-10-11 20:46:47,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:47:19] 2025-10-11 20:46:47,737 | INFO     | will abort loop
[2025-10-11 13:47:19] 2025-10-11 20:46:48,221 | INFO     | all data control threads have been joined
[2025-10-11 13:47:19] 2025-10-11 20:46:48,377 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:48,465 | INFO     | all job control threads have been joined
[2025-10-11 13:47:19] 2025-10-11 20:46:48,497 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:48,539 | INFO     | [payload] control thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:48,742 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:48,824 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:48,914 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:49,015 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:49,016 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:49,227 | INFO     | [data] control thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:49,442 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:49,471 | INFO     | [job] control thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:49,585 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:49,629 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:49,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:47:19] 2025-10-11 20:46:49,822 | INFO     | [job] validate thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:50,732 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:51,391 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:47:19] 2025-10-11 20:46:58,712 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:47:19] 2025-10-11 20:47:00,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140618817369920)>', '<ExcThread(monitor, started 140618294617856)>']
[2025-10-11 13:47:19] 2025-10-11 20:47:05,408 | INFO     | all workflow threads have been joined
[2025-10-11 13:47:19] 2025-10-11 20:47:05,408 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:47:19] 2025-10-11 20:47:05,409 | INFO     | traces error code: 0
[2025-10-11 13:47:19] 2025-10-11 20:47:05,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:47:19] 2025-10-11 20:47:17,997 | INFO     | PID=90240 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 13:47:19] 2025-10-11 20:47:17,998 | INFO     | .. there are 42 such processes running
[2025-10-11 13:47:19] 2025-10-11 20:47:17,999 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:47:19] 2025-10-11 20:47:17,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:47:19] 2025-10-11 20:47:17,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:47:19] 2025-10-11 20:47:17,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:47:19] 2025-10-11 20:47:17,999 | INFO     | [monitor] control thread has ended
[2025-10-11 13:47:19] 2025-10-11 20:47:18,432 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:47:19] 2025-10-11 20:47:18,446 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:47:19] 2025-10-11 20:47:18,474 [wrapper] pilotpid: 90240
[2025-10-11 13:47:19] 2025-10-11 20:47:18,499 [wrapper] Pilot exit status: 0
[2025-10-11 13:47:19] 2025-10-11 20:47:18,639 [wrapper] pandaids: 6838773099
[2025-10-11 13:47:19] 2025-10-11 20:47:18,885 [wrapper] cleanup supervisor_pilot   90246 90241
[2025-10-11 13:47:19] 2025-10-11 20:47:18,915 [wrapper] Test setup, not cleaning
[2025-10-11 13:47:19] 2025-10-11 20:47:18,927 [wrapper] apfmon messages muted
[2025-10-11 13:47:19] 2025-10-11 20:47:18,939 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:47:19] 2025-10-11 20:47:18,983 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:47:19]  *** Error codes and diagnostics ***
[2025-10-11 13:47:19]     "exeErrorCode": 65,
[2025-10-11 13:47:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 13:47:19]     "pilotErrorCode": 1305,
[2025-10-11 13:47:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 13:47:19]  *** Listing of results directory ***
[2025-10-11 13:47:19] total 224020
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc    557409 Oct 11 11:14 pilot3.tar.gz
[2025-10-11 13:47:19] -rwx------. 1 boinc boinc     36292 Oct 11 11:24 runpilot2-wrapper.sh
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc      5112 Oct 11 11:24 queuedata.json
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc       100 Oct 11 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:47:19] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 13:40 run_atlas
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc       105 Oct 11 13:40 job.xml
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc      6594 Oct 11 13:40 init_data.xml
[2025-10-11 13:47:19] -rw-r--r--. 2 boinc boinc 225262344 Oct 11 13:40 EVNT.46676267._002512.pool.root.1
[2025-10-11 13:47:19] -rw-r--r--. 2 boinc boinc     15120 Oct 11 13:40 start_atlas.sh
[2025-10-11 13:47:19] drwxrwx--x. 2 boinc boinc      4096 Oct 11 13:40 shared
[2025-10-11 13:47:19] -rw-r--r--. 2 boinc boinc    569676 Oct 11 13:40 input.tar.gz
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc         0 Oct 11 13:40 boinc_lockfile
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc      2550 Oct 11 13:40 pandaJob.out
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc    975528 Oct 11 13:40 agis_schedconf.cvmfs.json
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc   1560580 Oct 11 13:40 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:47:19] drwx------. 5 boinc boinc      4096 Oct 11 13:40 pilot3
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc       524 Oct 11 13:43 boinc_task_state.xml
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc       959 Oct 11 13:44 memory_monitor_summary.json
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc     22810 Oct 11 13:44 log.46676269._062529.job.log.tgz.1
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc      8384 Oct 11 13:46 heartbeat.json
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc        23 Oct 11 13:47 wrapper_checkpoint.txt
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc      8192 Oct 11 13:47 boinc_mmap_file
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc        95 Oct 11 13:47 pilot_heartbeat.json
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc       821 Oct 11 13:47 pilotlog.txt
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc     99320 Oct 11 13:47 log.46676269._062529.job.log.1
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc       188 Oct 11 13:47 output.list
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc       620 Oct 11 13:47 runtime_log
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc    143360 Oct 11 13:47 result.tar.gz
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc      8528 Oct 11 13:47 runtime_log.err
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc       643 Oct 11 13:47 EhTLDmHRtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWEhNDm7MSzAn.diag
[2025-10-11 13:47:19] -rw-r--r--. 1 boinc boinc     11386 Oct 11 13:47 stderr.txt
[2025-10-11 13:47:19] No HITS result produced
[2025-10-11 13:47:19]  *** Contents of shared directory: ***
[2025-10-11 13:47:19] total 220704
[2025-10-11 13:47:19] -rw-r--r--. 2 boinc boinc 225262344 Oct 11 13:40 ATLAS.root_0
[2025-10-11 13:47:19] -rw-r--r--. 2 boinc boinc     15120 Oct 11 13:40 start_atlas.sh
[2025-10-11 13:47:19] -rw-r--r--. 2 boinc boinc    569676 Oct 11 13:40 input.tar.gz
[2025-10-11 13:47:19] -rw-------. 1 boinc boinc    143360 Oct 11 13:47 result.tar.gz
13:47:21 (86222): run_atlas exited; CPU time 46.478368
13:47:21 (86222): called boinc_finish(0)

</stderr_txt>
]]>

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