Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:38:20 (933653): wrapper (7.7.26015): starting
22:38:20 (933653): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 22:38:20] Arguments: --nthreads 4
[2025-10-11 22:38:20] Threads: 4
[2025-10-11 22:38:20] Checking for CVMFS
[2025-10-11 22:38:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:38:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:38:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:38:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:38:34] 2.13.2.0 933891 0 25120 151595 3 1 34804 4096000 0 130560 0 0 0.000 1291 397 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 22:38:34] CVMFS is ok
[2025-10-11 22:38:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:38:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 22:38:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 22:38:34] Further information can be found at the LHC@home message board.
[2025-10-11 22:38:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:38:34] Checking for apptainer binary...
[2025-10-11 22:38:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:38:34] Running /usr/bin/apptainer --version
[2025-10-11 22:38:34] apptainer version 1.4.2
[2025-10-11 22:38:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:38:46] Obake-chan
[2025-10-11 22:38:46] apptainer works
[2025-10-11 22:38:46] Set ATHENA_PROC_NUMBER=4
[2025-10-11 22:38:46] Set ATHENA_CORE_NUMBER=4
[2025-10-11 22:38:46] Starting ATLAS job with PandaID=6838451536
[2025-10-11 22:38:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:43:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:43:10] 2025-10-11 23:42:04,613 | INFO     | executing command: lscpu
[2025-10-12 01:43:10] 2025-10-11 23:42:04,645 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 01:43:10] 2025-10-11 23:42:05,335 | INFO     | time since job start (10698s) is within the limit (172800.0s)
[2025-10-12 01:43:10] 2025-10-11 23:42:06,500 | INFO     | monitor loop #918: job 0:6838451536 is in state 'finished'
[2025-10-12 01:43:10] 2025-10-11 23:42:06,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:43:10] 2025-10-11 23:42:07,341 | INFO     | time since job start (10700s) is within the limit (172800.0s)
[2025-10-12 01:43:10] 2025-10-11 23:42:09,003 | INFO     | monitor loop #919: job 0:6838451536 is in state 'finished'
[2025-10-12 01:43:10] 2025-10-11 23:42:09,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:43:10] 2025-10-11 23:42:09,346 | INFO     | time since job start (10702s) is within the limit (172800.0s)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,351 | INFO     | time since job start (10704s) is within the limit (172800.0s)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,444 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 01:43:10] 2025-10-11 23:42:11,447 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2199.3566875
[2025-10-12 01:43:10] 2025-10-11 23:42:11,449 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6838451536/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,450 | INFO     | extracted standard info from prmon json
[2025-10-12 01:43:10] 2025-10-11 23:42:11,450 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 01:43:10] 2025-10-11 23:42:11,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 01:43:10] 2025-10-11 23:42:11,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:43:10] 2025-10-11 23:42:11,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:43:10] 2025-10-11 23:42:11,453 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:43:10] 2025-10-11 23:42:11,453 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,454 | INFO     | sum of deviations: 282030787574.00006
[2025-10-12 01:43:10] 2025-10-11 23:42:11,454 | INFO     | mean x: 1760220938.0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,454 | INFO     | mean y: 2001192.775147929
[2025-10-12 01:43:10] 2025-10-11 23:42:11,454 | INFO     | -- intersect: -331694103331.16504
[2025-10-12 01:43:10] 2025-10-11 23:42:11,454 | INFO     | intersect: -331694103331.16504
[2025-10-12 01:43:10] 2025-10-11 23:42:11,454 | INFO     | chi2: 34.244294408004535
[2025-10-12 01:43:10] 2025-10-11 23:42:11,455 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,455 | INFO     | sum of deviations: 272716681287.00003
[2025-10-12 01:43:10] 2025-10-11 23:42:11,455 | INFO     | mean x: 1760220785.5
[2025-10-12 01:43:10] 2025-10-11 23:42:11,455 | INFO     | mean y: 1990174.5731707318
[2025-10-12 01:43:10] 2025-10-11 23:42:11,455 | INFO     | -- intersect: -350980157961.8157
[2025-10-12 01:43:10] 2025-10-11 23:42:11,455 | INFO     | intersect: -350980157961.8157
[2025-10-12 01:43:10] 2025-10-11 23:42:11,456 | INFO     | chi2: 34.0234360982386
[2025-10-12 01:43:10] 2025-10-11 23:42:11,456 | INFO     | current chi2=34.0234360982386 (change=0.644949220254081 %)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,456 | INFO     | right removable region: 163
[2025-10-12 01:43:10] 2025-10-11 23:42:11,456 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,457 | INFO     | sum of deviations: 231017878831.50003
[2025-10-12 01:43:10] 2025-10-11 23:42:11,457 | INFO     | mean x: 1760221090.5
[2025-10-12 01:43:10] 2025-10-11 23:42:11,457 | INFO     | mean y: 2061532.9085365853
[2025-10-12 01:43:10] 2025-10-11 23:42:11,457 | INFO     | -- intersect: -297314424708.8742
[2025-10-12 01:43:10] 2025-10-11 23:42:11,457 | INFO     | intersect: -297314424708.8742
[2025-10-12 01:43:10] 2025-10-11 23:42:11,457 | INFO     | chi2: 27.24358369579209
[2025-10-12 01:43:10] 2025-10-11 23:42:11,457 | INFO     | current chi2=27.24358369579209 (change=20.443436879739135 %)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,457 | INFO     | left removable region: 10
[2025-10-12 01:43:10] 2025-10-11 23:42:11,457 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,458 | INFO     | sum of deviations: 174534570303.99997
[2025-10-12 01:43:10] 2025-10-11 23:42:11,458 | INFO     | mean x: 1760221060.0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,458 | INFO     | mean y: 2114441.5490196077
[2025-10-12 01:43:10] 2025-10-11 23:42:11,458 | INFO     | -- intersect: -276637588967.8188
[2025-10-12 01:43:10] 2025-10-11 23:42:11,458 | INFO     | intersect: -276637588967.8188
[2025-10-12 01:43:10] 2025-10-11 23:42:11,458 | INFO     | chi2: 20.683465511360115
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | -- intersect: -276637588967.8188
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | current memory leak: 157.16 B/s (using 153 data points, chi2=20.68)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | could have reported an average CPU frequency of 2199 MHz (9 samples)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | ..............................
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | . Timing measurements:
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | . get job = 0 s
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | . initial setup = 26 s
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | . payload setup = 351 s
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | . stage-in = 0 s
[2025-10-12 01:43:10] 2025-10-11 23:42:11,459 | INFO     | . payload execution = 10321 s
[2025-10-12 01:43:10] 2025-10-11 23:42:11,460 | INFO     | . stage-out = 0 s
[2025-10-12 01:43:10] 2025-10-11 23:42:11,460 | INFO     | . log creation = 0 s
[2025-10-12 01:43:10] 2025-10-11 23:42:11,460 | INFO     | ..............................
[2025-10-12 01:43:10] 2025-10-11 23:42:11,732 | INFO     | 
[2025-10-12 01:43:10] 2025-10-11 23:42:11,732 | INFO     | job summary report
[2025-10-12 01:43:10] 2025-10-11 23:42:11,732 | INFO     | --------------------------------------------------
[2025-10-12 01:43:10] 2025-10-11 23:42:11,732 | INFO     | PanDA job id: 6838451536
[2025-10-12 01:43:10] 2025-10-11 23:42:11,732 | INFO     | task id: 46676269
[2025-10-12 01:43:10] 2025-10-11 23:42:11,732 | INFO     | errors: (none)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | pilot state: finished 
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | transexitcode: 0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | exeerrorcode: 0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | exeerrordiag: 
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | exitcode: 0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | exitmsg: OK
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | cpuconsumptiontime: 29400 s
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | nevents: 400
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | neventsw: 0
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | pid: 949595
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | pgrp: 949595
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | corecount: 4
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | event service: False
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | sizes: {0: 2348029, 1: 2348637, 2: 2348920, 7: 2349182, 12: 2349210, 10675: 2378090, 10676: 2378217, 10677: 2387285, 10680: 2387341, 10687: 2387599}
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | --------------------------------------------------
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | 
[2025-10-12 01:43:10] 2025-10-11 23:42:11,733 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-12 01:43:10] 2025-10-11 23:42:11,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:43:10] 2025-10-11 23:42:11,753 | INFO     | job 6838451536 has completed (purged errors)
[2025-10-12 01:43:10] 2025-10-11 23:42:11,753 | INFO     | overall cleanup function is called
[2025-10-12 01:43:10] 2025-10-11 23:42:12,760 | INFO     | --- collectZombieJob: --- 10, [949595]
[2025-10-12 01:43:10] 2025-10-11 23:42:12,760 | INFO     | zombie collector waiting for pid 949595
[2025-10-12 01:43:10] 2025-10-11 23:42:12,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:43:10] 2025-10-11 23:42:12,761 | INFO     | collected zombie processes
[2025-10-12 01:43:10] 2025-10-11 23:42:12,761 | INFO     | will attempt to kill all subprocesses of pid=949595
[2025-10-12 01:43:10] 2025-10-11 23:42:12,878 | INFO     | process IDs to be killed: [949595] (in reverse order)
[2025-10-12 01:43:10] 2025-10-11 23:42:12,935 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:43:10] 2025-10-11 23:42:12,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:43:10] 2025-10-11 23:42:12,941 | INFO     | did not find any defunct processes belonging to 949595
[2025-10-12 01:43:10] 2025-10-11 23:42:12,945 | INFO     | did not find any defunct processes belonging to 949595
[2025-10-12 01:43:10] 2025-10-11 23:42:12,946 | INFO     | ready for new job
[2025-10-12 01:43:10] 2025-10-11 23:42:12,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:43:10] 2025-10-11 23:42:12,948 | INFO     | ***************************************
[2025-10-12 01:43:10] 2025-10-11 23:42:12,948 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:43:10] 2025-10-11 23:42:12,948 | INFO     | ***************************************
[2025-10-12 01:43:10] 2025-10-11 23:42:12,948 | INFO     | 
[2025-10-12 01:43:10] 2025-10-11 23:42:12,949 | INFO     | architecture information:
[2025-10-12 01:43:10] 2025-10-11 23:42:12,950 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:43:10] 2025-10-11 23:42:12,964 | INFO     | cat /etc/os-release:
[2025-10-12 01:43:10] NAME="CentOS Linux"
[2025-10-12 01:43:10] VERSION="7 (Core)"
[2025-10-12 01:43:10] ID="centos"
[2025-10-12 01:43:10] ID_LIKE="rhel fedora"
[2025-10-12 01:43:10] VERSION_ID="7"
[2025-10-12 01:43:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:43:10] ANSI_COLOR="0;31"
[2025-10-12 01:43:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:43:10] HOME_URL="https://www.centos.org/"
[2025-10-12 01:43:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:43:10] 
[2025-10-12 01:43:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:43:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:43:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:43:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:43:10] 
[2025-10-12 01:43:10] 2025-10-11 23:42:12,964 | INFO     | ***************************************
[2025-10-12 01:43:10] 2025-10-11 23:42:13,467 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-12 01:43:10] 2025-10-11 23:42:13,483 | INFO     | sufficient remaining disk space (77767639040 B)
[2025-10-12 01:43:10] 2025-10-11 23:42:13,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:43:10] 2025-10-11 23:42:13,484 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:43:10] 2025-10-11 23:42:13,484 | INFO     | update_server=False
[2025-10-12 01:43:10] 2025-10-11 23:42:13,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:43:10] 2025-10-11 23:42:13,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:43:10] 2025-10-11 23:42:13,484 | INFO     | aborting loop
[2025-10-12 01:43:10] 2025-10-11 23:42:13,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:43:10] 2025-10-11 23:42:13,853 | INFO     | all data control threads have been joined
[2025-10-12 01:43:10] 2025-10-11 23:42:13,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:43:10] 2025-10-11 23:42:14,133 | INFO     | all payload control threads have been joined
[2025-10-12 01:43:10] 2025-10-11 23:42:14,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:43:10] 2025-10-11 23:42:14,485 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:14,489 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:14,489 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:14,510 | INFO     | all job control threads have been joined
[2025-10-12 01:43:10] 2025-10-11 23:42:14,804 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:14,856 | INFO     | [data] control thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:15,138 | INFO     | [payload] control thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:15,167 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:15,210 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:15,218 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:15,238 | INFO     | [job] validate thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:15,515 | INFO     | [job] control thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:15,708 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:15,764 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:15,964 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:18,342 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:23,824 | INFO     | job.realtimelogging is not enabled
[2025-10-12 01:43:10] 2025-10-11 23:42:24,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:43:10] 2025-10-11 23:42:35,795 [wrapper] supervise_pilot (15 min periods counter: 13)
[2025-10-12 01:43:10] 2025-10-11 23:42:44,569 | INFO     | PID=939874 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 01:43:10] 2025-10-11 23:42:44,569 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:43:10] 2025-10-11 23:42:44,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:43:10] 2025-10-11 23:42:44,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:43:10] 2025-10-11 23:43:03,792 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:43:10] 2025-10-11 23:43:04,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127989659973440)>', '<ExcThread(monitor, started 127988817458944)>']
[2025-10-12 01:43:10] 2025-10-11 23:43:05,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:43:10] 2025-10-11 23:43:05,667 | INFO     | [monitor] control thread has ended
[2025-10-12 01:43:10] 2025-10-11 23:43:09,863 | INFO     | all workflow threads have been joined
[2025-10-12 01:43:10] 2025-10-11 23:43:09,870 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:43:10] 2025-10-11 23:43:09,870 | INFO     | traces error code: 0
[2025-10-12 01:43:10] 2025-10-11 23:43:09,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:43:10] 2025-10-11 23:43:09,949 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:43:10] 2025-10-11 23:43:09,952 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:43:10] 2025-10-11 23:43:09,954 [wrapper] pilotpid: 939874
[2025-10-12 01:43:10] 2025-10-11 23:43:09,956 [wrapper] Pilot exit status: 0
[2025-10-12 01:43:10] 2025-10-11 23:43:10,052 [wrapper] pandaids: 6838451536
[2025-10-12 01:43:10] 2025-10-11 23:43:10,087 [wrapper] cleanup supervisor_pilot 1063486 939875
[2025-10-12 01:43:10] 2025-10-11 23:43:10,090 [wrapper] Test setup, not cleaning
[2025-10-12 01:43:10] 2025-10-11 23:43:10,092 [wrapper] apfmon messages muted
[2025-10-12 01:43:10] 2025-10-11 23:43:10,095 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:43:10] 2025-10-11 23:43:10,097 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:43:10]  *** Error codes and diagnostics ***
[2025-10-12 01:43:10]     "exeErrorCode": 0,
[2025-10-12 01:43:10]     "exeErrorDiag": "",
[2025-10-12 01:43:10]     "pilotErrorCode": 0,
[2025-10-12 01:43:10]     "pilotErrorDiag": "",
[2025-10-12 01:43:10]  *** Listing of results directory ***
[2025-10-12 01:43:10] insgesamt 405732
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc    557409 Okt 11 14:51 pilot3.tar.gz
[2025-10-12 01:43:10] -rwx------ 1 boinc boinc     36292 Okt 11 15:05 runpilot2-wrapper.sh
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc      5112 Okt 11 15:05 queuedata.json
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc       100 Okt 11 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:43:10] -rwxr-xr-x 1 boinc boinc      7986 Okt 11 22:38 run_atlas
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc       105 Okt 11 22:38 job.xml
[2025-10-12 01:43:10] -rw-r--r-- 2 boinc boinc 218043254 Okt 11 22:38 EVNT.46676267._002334.pool.root.1
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc      9695 Okt 11 22:38 init_data.xml
[2025-10-12 01:43:10] -rw-r--r-- 2 boinc boinc     15120 Okt 11 22:38 start_atlas.sh
[2025-10-12 01:43:10] drwxrwx--x 2 boinc boinc      4096 Okt 11 22:38 shared
[2025-10-12 01:43:10] -rw-r--r-- 2 boinc boinc    569676 Okt 11 22:38 input.tar.gz
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc         0 Okt 11 22:38 boinc_lockfile
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc      2550 Okt 11 22:38 pandaJob.out
[2025-10-12 01:43:10] -rw------- 1 boinc boinc    975528 Okt 11 22:43 agis_schedconf.cvmfs.json
[2025-10-12 01:43:10] -rw------- 1 boinc boinc   1560580 Okt 11 22:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:43:10] drwx------ 5 boinc boinc      4096 Okt 11 22:43 pilot3
[2025-10-12 01:43:10] -rw------- 1 boinc boinc 189790663 Okt 12 01:41 HITS.46676269._058216.pool.root.1
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc       531 Okt 12 01:41 boinc_task_state.xml
[2025-10-12 01:43:10] -rw------- 1 boinc boinc      1015 Okt 12 01:41 memory_monitor_summary.json
[2025-10-12 01:43:10] -rw------- 1 boinc boinc    363060 Okt 12 01:42 log.46676269._058216.job.log.tgz.1
[2025-10-12 01:43:10] -rw------- 1 boinc boinc      7751 Okt 12 01:42 heartbeat.json
[2025-10-12 01:43:10] -rw------- 1 boinc boinc        95 Okt 12 01:42 pilot_heartbeat.json
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc      8192 Okt 12 01:42 boinc_mmap_file
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc        28 Okt 12 01:42 wrapper_checkpoint.txt
[2025-10-12 01:43:10] -rw------- 1 boinc boinc      4826 Okt 12 01:43 pilotlog.txt
[2025-10-12 01:43:10] -rw------- 1 boinc boinc   1497198 Okt 12 01:43 log.46676269._058216.job.log.1
[2025-10-12 01:43:10] -rw------- 1 boinc boinc       357 Okt 12 01:43 output.list
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc       620 Okt 12 01:43 runtime_log
[2025-10-12 01:43:10] -rw------- 1 boinc boinc   1884160 Okt 12 01:43 result.tar.gz
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc      8768 Okt 12 01:43 runtime_log.err
[2025-10-12 01:43:10] -rw------- 1 boinc boinc       647 Okt 12 01:43 QfLNDmzSoR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmiwRMDmy9r01m.diag
[2025-10-12 01:43:10] -rw-r--r-- 1 boinc boinc     21494 Okt 12 01:43 stderr.txt
[2025-10-12 01:43:10] HITS file was successfully produced:
[2025-10-12 01:43:10] -rw------- 1 boinc boinc 189790663 Okt 12 01:41 shared/HITS.pool.root.1
[2025-10-12 01:43:10]  *** Contents of shared directory: ***
[2025-10-12 01:43:10] insgesamt 400704
[2025-10-12 01:43:10] -rw-r--r-- 2 boinc boinc 218043254 Okt 11 22:38 ATLAS.root_0
[2025-10-12 01:43:10] -rw-r--r-- 2 boinc boinc     15120 Okt 11 22:38 start_atlas.sh
[2025-10-12 01:43:10] -rw-r--r-- 2 boinc boinc    569676 Okt 11 22:38 input.tar.gz
[2025-10-12 01:43:10] -rw------- 1 boinc boinc 189790663 Okt 12 01:41 HITS.pool.root.1
[2025-10-12 01:43:10] -rw------- 1 boinc boinc   1884160 Okt 12 01:43 result.tar.gz
01:43:12 (933653): run_atlas exited; CPU time 29520.928454
01:43:12 (933653): called boinc_finish(0)

</stderr_txt>
]]>

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