Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:38:58 (964822): wrapper (7.7.26015): starting
16:38:58 (964822): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 16:38:58] Arguments: --nthreads 12
[2025-10-11 16:38:58] Threads: 12
[2025-10-11 16:38:58] Checking for CVMFS
[2025-10-11 16:38:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:38:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:38:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:38:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:38:59] 2.13.2.0 3683012 11838 147860 151595 0 196 36326823 40960001 8194 16776704 0 128496534 99.842 55037564 32593 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 16:38:59] CVMFS is ok
[2025-10-11 16:38:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:38:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:38:59] Further information can be found at the LHC@home message board.
[2025-10-11 16:38:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:38:59] Checking for apptainer binary...
[2025-10-11 16:38:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:38:59] Running /usr/bin/apptainer --version
[2025-10-11 16:38:59] apptainer version 1.4.3-1.el9
[2025-10-11 16:38:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:38:59] c8-7-4.aglt2.org
[2025-10-11 16:38:59] apptainer works
[2025-10-11 16:38:59] Set ATHENA_PROC_NUMBER=12
[2025-10-11 16:38:59] Set ATHENA_CORE_NUMBER=12
[2025-10-11 16:38:59] Starting ATLAS job with PandaID=6838451489
[2025-10-11 16:38:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:11:18]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:11:18]  replicas=None
[2025-10-11 17:11:18]  scope=mc23_13p6TeV
[2025-10-11 17:11:18]  status=None
[2025-10-11 17:11:18]  status_code=0
[2025-10-11 17:11:18]  storage_token=
[2025-10-11 17:11:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838451489/log.46676269._058169.job.log.tgz.1
[2025-10-11 17:11:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/18/log.46676269._058169.job.log.tgz.1
[2025-10-11 17:11:18]  workdir=None
[2025-10-11 17:11:18] ]
[2025-10-11 17:11:18] 2025-10-11 21:10:30,017 | INFO     | transferring file log.46676269._058169.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838451489/log.46676269._058169.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 17:11:18] 2025-10-11 21:10:30,017 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838451489/log.46676269._058169.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._058169.job
[2025-10-11 17:11:18] 2025-10-11 21:10:30,030 | INFO     | adding to output.list: log.46676269._058169.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/18/log.46676269._058169.job.log.tg
[2025-10-11 17:11:18] 2025-10-11 21:10:30,031 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 17:11:18] 2025-10-11 21:10:30,031 | INFO     | summary of transferred files:
[2025-10-11 17:11:18] 2025-10-11 21:10:30,031 | INFO     |  -- lfn=log.46676269._058169.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 17:11:18] 2025-10-11 21:10:30,031 | INFO     | stage-out finished correctly
[2025-10-11 17:11:18] 2025-10-11 21:10:30,722 | INFO     | monitor loop #143: job 0:6838451489 is in state 'finished'
[2025-10-11 17:11:18] 2025-10-11 21:10:30,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:11:18] 2025-10-11 21:10:31,533 | INFO     | time since job start (1883s) is within the limit (172800.0s)
[2025-10-11 17:11:18] 2025-10-11 21:10:33,225 | INFO     | monitor loop #144: job 0:6838451489 is in state 'finished'
[2025-10-11 17:11:18] 2025-10-11 21:10:33,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:11:18] 2025-10-11 21:10:33,291 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 17:11:18] 2025-10-11 21:10:33,538 | INFO     | time since job start (1885s) is within the limit (172800.0s)
[2025-10-11 17:11:18] 2025-10-11 21:10:33,847 | INFO     | job 6838451489 has state=finished
[2025-10-11 17:11:18] 2025-10-11 21:10:33,847 | INFO     | preparing for final server update for job 6838451489 in state='finished'
[2025-10-11 17:11:18] 2025-10-11 21:10:33,847 | INFO     | this job has now completed (state=finished)
[2025-10-11 17:11:18] 2025-10-11 21:10:33,847 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 17:11:18] 2025-10-11 21:10:33,847 | INFO     | log transfer has been attempted: DONE
[2025-10-11 17:11:18] 2025-10-11 21:10:33,848 | INFO     | job 6838451489 has finished - writing final server update
[2025-10-11 17:11:18] 2025-10-11 21:10:33,848 | INFO     | total number of processed events: 400 (read)
[2025-10-11 17:11:18] 2025-10-11 21:10:33,848 | INFO     | executing command: lscpu
[2025-10-11 17:11:18] 2025-10-11 21:10:33,912 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 17:11:18] 2025-10-11 21:10:35,544 | INFO     | time since job start (1887s) is within the limit (172800.0s)
[2025-10-11 17:11:18] 2025-10-11 21:10:35,728 | INFO     | monitor loop #145: job 0:6838451489 is in state 'finished'
[2025-10-11 17:11:18] 2025-10-11 21:10:35,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:11:18] 2025-10-11 21:10:37,295 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 17:11:18] 2025-10-11 21:10:37,313 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3684.158476562494
[2025-10-11 17:11:18] 2025-10-11 21:10:37,326 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838451489/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:11:18] 2025-10-11 21:10:37,326 | INFO     | extracted standard info from prmon json
[2025-10-11 17:11:18] 2025-10-11 21:10:37,326 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:11:18] 2025-10-11 21:10:37,326 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:11:18] 2025-10-11 21:10:37,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:11:18] 2025-10-11 21:10:37,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:11:18] 2025-10-11 21:10:37,327 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:11:18] 2025-10-11 21:10:37,327 | INFO     | sum of square deviations: 4279150.0
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | sum of deviations: 93412838.00000001
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | mean x: 1760216178.5
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | mean y: 2410627.1666666665
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | -- intersect: -38422694528.5768
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | intersect: -38422694528.5768
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | chi2: 0.0006485231842089356
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | -- intersect: -38422694528.5768
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | current memory leak: 21.83 B/s (using 24 data points, chi2=0.00)
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | could have reported an average CPU frequency of 3686 MHz (5 samples)
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | ..............................
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | . Timing measurements:
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | . get job = 0 s
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | . initial setup = 2 s
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | . payload setup = 4 s
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | . stage-in = 0 s
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | . payload execution = 1857 s
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | . stage-out = 0 s
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | . log creation = 0 s
[2025-10-11 17:11:18] 2025-10-11 21:10:37,328 | INFO     | ..............................
[2025-10-11 17:11:18] 2025-10-11 21:10:37,549 | INFO     | time since job start (1889s) is within the limit (172800.0s)
[2025-10-11 17:11:18] 2025-10-11 21:10:37,707 | INFO     | 
[2025-10-11 17:11:18] 2025-10-11 21:10:37,707 | INFO     | job summary report
[2025-10-11 17:11:18] 2025-10-11 21:10:37,707 | INFO     | --------------------------------------------------
[2025-10-11 17:11:18] 2025-10-11 21:10:37,707 | INFO     | PanDA job id: 6838451489
[2025-10-11 17:11:18] 2025-10-11 21:10:37,707 | INFO     | task id: 46676269
[2025-10-11 17:11:18] 2025-10-11 21:10:37,707 | INFO     | errors: (none)
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | pilot state: finished 
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | transexitcode: 0
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | exeerrorcode: 0
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | exeerrordiag: 
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | exitcode: 0
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | exitmsg: OK
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | cpuconsumptiontime: 19452 s
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | nevents: 400
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | neventsw: 0
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | pid: 975772
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | pgrp: 975772
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | corecount: 12
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | event service: False
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | sizes: {0: 2348855, 4: 2349117, 11: 2349145, 1865: 2374120, 1866: 2374119, 1867: 2383173, 1870: 2383357, 1874: 2383583}
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | --------------------------------------------------
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | 
[2025-10-11 17:11:18] 2025-10-11 21:10:37,708 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:11:18] 2025-10-11 21:10:37,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,728 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:11:18] 2025-10-11 21:10:37,728 | INFO     | job 6838451489 has completed (purged errors)
[2025-10-11 17:11:18] 2025-10-11 21:10:37,728 | INFO     | overall cleanup function is called
[2025-10-11 17:11:18] 2025-10-11 21:10:38,735 | INFO     | --- collectZombieJob: --- 10, [975772]
[2025-10-11 17:11:18] 2025-10-11 21:10:38,735 | INFO     | zombie collector waiting for pid 975772
[2025-10-11 17:11:18] 2025-10-11 21:10:38,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:11:18] 2025-10-11 21:10:38,736 | INFO     | collected zombie processes
[2025-10-11 17:11:18] 2025-10-11 21:10:38,736 | INFO     | will attempt to kill all subprocesses of pid=975772
[2025-10-11 17:11:18] 2025-10-11 21:10:39,078 | INFO     | process IDs to be killed: [975772] (in reverse order)
[2025-10-11 17:11:18] 2025-10-11 21:10:39,200 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:11:18] 2025-10-11 21:10:39,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:11:18] 2025-10-11 21:10:39,216 | INFO     | did not find any defunct processes belonging to 975772
[2025-10-11 17:11:18] 2025-10-11 21:10:39,228 | INFO     | did not find any defunct processes belonging to 975772
[2025-10-11 17:11:18] 2025-10-11 21:10:39,228 | INFO     | ready for new job
[2025-10-11 17:11:18] 2025-10-11 21:10:39,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:11:18] 2025-10-11 21:10:39,229 | INFO     | ***************************************
[2025-10-11 17:11:18] 2025-10-11 21:10:39,230 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:11:18] 2025-10-11 21:10:39,230 | INFO     | ***************************************
[2025-10-11 17:11:18] 2025-10-11 21:10:39,230 | INFO     | 
[2025-10-11 17:11:18] 2025-10-11 21:10:39,247 | INFO     | architecture information:
[2025-10-11 17:11:18] 2025-10-11 21:10:39,247 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:11:18] 2025-10-11 21:10:39,262 | INFO     | cat /etc/os-release:
[2025-10-11 17:11:18] NAME="CentOS Linux"
[2025-10-11 17:11:18] VERSION="7 (Core)"
[2025-10-11 17:11:18] ID="centos"
[2025-10-11 17:11:18] ID_LIKE="rhel fedora"
[2025-10-11 17:11:18] VERSION_ID="7"
[2025-10-11 17:11:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:11:18] ANSI_COLOR="0;31"
[2025-10-11 17:11:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:11:18] HOME_URL="https://www.centos.org/"
[2025-10-11 17:11:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:11:18] 
[2025-10-11 17:11:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:11:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:11:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:11:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:11:18] 
[2025-10-11 17:11:18] 2025-10-11 21:10:39,263 | INFO     | ***************************************
[2025-10-11 17:11:18] 2025-10-11 21:10:39,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 17:11:18] 2025-10-11 21:10:39,781 | INFO     | sufficient remaining disk space (168085684224 B)
[2025-10-11 17:11:18] 2025-10-11 21:10:39,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:11:18] 2025-10-11 21:10:39,781 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:11:18] 2025-10-11 21:10:39,781 | INFO     | update_server=False
[2025-10-11 17:11:18] 2025-10-11 21:10:39,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:11:18] 2025-10-11 21:10:39,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:11:18] 2025-10-11 21:10:39,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:11:18] 2025-10-11 21:10:39,782 | INFO     | aborting loop
[2025-10-11 17:11:18] 2025-10-11 21:10:39,791 | INFO     | all data control threads have been joined
[2025-10-11 17:11:18] 2025-10-11 21:10:40,296 | INFO     | all payload control threads have been joined
[2025-10-11 17:11:18] 2025-10-11 21:10:40,364 | INFO     | all job control threads have been joined
[2025-10-11 17:11:18] 2025-10-11 21:10:40,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:11:18] 2025-10-11 21:10:40,787 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:40,787 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:40,793 | INFO     | [data] control thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:41,188 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:41,302 | INFO     | [payload] control thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:41,364 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:41,369 | INFO     | [job] control thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:41,424 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:41,647 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:41,836 | INFO     | [job] validate thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:41,931 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:42,061 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:42,289 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:42,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:11:18] 2025-10-11 21:10:42,604 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:43,398 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:10:43,788 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:11:18] 2025-10-11 21:11:11,063 | INFO     | PID=968658 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 17:11:18] 2025-10-11 21:11:11,063 | INFO     | .. there are 12 such processes running
[2025-10-11 17:11:18] 2025-10-11 21:11:11,063 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:11:18] 2025-10-11 21:11:11,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:11:18] 2025-10-11 21:11:11,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:11:18] 2025-10-11 21:11:11,264 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:11:18] 2025-10-11 21:11:13,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140103987521344)>', '<ExcThread(monitor, started 140103359911680)>']
[2025-10-11 17:11:18] 2025-10-11 21:11:14,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:11:18] 2025-10-11 21:11:14,078 | INFO     | [monitor] control thread has ended
[2025-10-11 17:11:18] 2025-10-11 21:11:18,316 | INFO     | all workflow threads have been joined
[2025-10-11 17:11:18] 2025-10-11 21:11:18,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:11:18] 2025-10-11 21:11:18,316 | INFO     | traces error code: 0
[2025-10-11 17:11:18] 2025-10-11 21:11:18,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:11:18] 2025-10-11 21:11:18,400 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:11:18] 2025-10-11 21:11:18,402 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:11:18] 2025-10-11 21:11:18,404 [wrapper] pilotpid: 968658
[2025-10-11 17:11:18] 2025-10-11 21:11:18,405 [wrapper] Pilot exit status: 0
[2025-10-11 17:11:18] 2025-10-11 21:11:18,412 [wrapper] pandaids: 6838451489
[2025-10-11 17:11:18] 2025-10-11 21:11:18,478 [wrapper] cleanup supervisor_pilot 1190929 968659
[2025-10-11 17:11:18] 2025-10-11 21:11:18,481 [wrapper] Test setup, not cleaning
[2025-10-11 17:11:18] 2025-10-11 21:11:18,483 [wrapper] apfmon messages muted
[2025-10-11 17:11:18] 2025-10-11 21:11:18,485 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:11:18] 2025-10-11 21:11:18,487 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:11:18]  *** Error codes and diagnostics ***
[2025-10-11 17:11:18]     "exeErrorCode": 0,
[2025-10-11 17:11:18]     "exeErrorDiag": "",
[2025-10-11 17:11:18]     "pilotErrorCode": 0,
[2025-10-11 17:11:18]     "pilotErrorDiag": "",
[2025-10-11 17:11:18]  *** Listing of results directory ***
[2025-10-11 17:11:18] total 406620
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 08:51 pilot3.tar.gz
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 09:03 queuedata.json
[2025-10-11 17:11:18] -rwx------. 1 boincer umatlas     36292 Oct 11 09:03 runpilot2-wrapper.sh
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:11:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:38 run_atlas
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:38 job.xml
[2025-10-11 17:11:18] -rw-r--r--. 2 boincer umatlas 221233160 Oct 11 16:38 EVNT.46676267._002333.pool.root.1
[2025-10-11 17:11:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:38 start_atlas.sh
[2025-10-11 17:11:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:38 shared
[2025-10-11 17:11:18] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 16:38 input.tar.gz
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:38 boinc_lockfile
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 16:38 pandaJob.out
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas    975528 Oct 11 16:39 agis_schedconf.cvmfs.json
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas   1560580 Oct 11 16:39 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:11:18] drwx------. 5 boincer umatlas      4096 Oct 11 16:39 pilot3
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas      7164 Oct 11 17:01 init_data.xml
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas 189941521 Oct 11 17:10 HITS.46676269._058169.pool.root.1
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas       529 Oct 11 17:10 boinc_task_state.xml
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas      1027 Oct 11 17:10 memory_monitor_summary.json
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas    334176 Oct 11 17:10 log.46676269._058169.job.log.tgz.1
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas      7773 Oct 11 17:10 heartbeat.json
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas        95 Oct 11 17:11 pilot_heartbeat.json
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 17:11 boinc_mmap_file
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas        27 Oct 11 17:11 wrapper_checkpoint.txt
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas      4824 Oct 11 17:11 pilotlog.txt
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas    311888 Oct 11 17:11 log.46676269._058169.job.log.1
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas       357 Oct 11 17:11 output.list
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas       620 Oct 11 17:11 runtime_log
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas    665600 Oct 11 17:11 result.tar.gz
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 17:11 runtime_log.err
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas       648 Oct 11 17:11 iusKDm2QoR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXVgNDmpWAs7m.diag
[2025-10-11 17:11:18] -rw-r--r--. 1 boincer umatlas     21861 Oct 11 17:11 stderr.txt
[2025-10-11 17:11:18] HITS file was successfully produced:
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas 189941521 Oct 11 17:10 shared/HITS.pool.root.1
[2025-10-11 17:11:18]  *** Contents of shared directory: ***
[2025-10-11 17:11:18] total 402780
[2025-10-11 17:11:18] -rw-r--r--. 2 boincer umatlas 221233160 Oct 11 16:38 ATLAS.root_0
[2025-10-11 17:11:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:38 start_atlas.sh
[2025-10-11 17:11:18] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 16:38 input.tar.gz
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas 189941521 Oct 11 17:10 HITS.pool.root.1
[2025-10-11 17:11:18] -rw-------. 1 boincer umatlas    665600 Oct 11 17:11 result.tar.gz
17:11:19 (964822): run_atlas exited; CPU time 19478.897581
17:11:19 (964822): called boinc_finish(0)

</stderr_txt>
]]>

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