Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:54:18 (106875): wrapper (7.7.26015): starting
15:54:18 (106875): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 15:54:18] Arguments: --nthreads 4
[2025-10-13 15:54:18] Threads: 4
[2025-10-13 15:54:18] Checking for CVMFS
[2025-10-13 15:54:18] No cvmfs_config command found, will try listing directly
[2025-10-13 15:54:18] CVMFS is ok
[2025-10-13 15:54:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:54:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 15:54:18] Further information can be found at the LHC@home message board.
[2025-10-13 15:54:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:54:18] Checking for apptainer binary...
[2025-10-13 15:54:18] which: no apptainer in ((null))
[2025-10-13 15:54:18] apptainer is not installed, using version from CVMFS
[2025-10-13 15:54:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:54:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-13 15:54:19] apptainer works
[2025-10-13 15:54:19] Set ATHENA_PROC_NUMBER=4
[2025-10-13 15:54:19] Set ATHENA_CORE_NUMBER=4
[2025-10-13 15:54:19] Starting ATLAS job with PandaID=6838602721
[2025-10-13 15:54:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:08:56 (596189): wrapper (7.7.26015): starting
19:08:56 (596189): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:08:56] Arguments: --nthreads 4
[2025-10-13 19:08:56] Threads: 4
[2025-10-13 19:08:56] This job has been restarted, cleaning up previous attempt
[2025-10-13 19:08:56] Checking for CVMFS
[2025-10-13 19:08:56] No cvmfs_config command found, will try listing directly
[2025-10-13 19:08:56] CVMFS is ok
[2025-10-13 19:08:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:08:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:08:56] Further information can be found at the LHC@home message board.
[2025-10-13 19:08:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:08:56] Checking for apptainer binary...
[2025-10-13 19:08:56] which: no apptainer in ((null))
[2025-10-13 19:08:56] apptainer is not installed, using version from CVMFS
[2025-10-13 19:08:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:08:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-13 19:08:56] apptainer works
[2025-10-13 19:08:56] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:08:56] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:08:56] Starting ATLAS job with PandaID=6838602721
[2025-10-13 19:08:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:47:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:47:16] 2025-10-13 19:43:27,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:47:16] 2025-10-13 19:43:27,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:47:16] 2025-10-13 19:43:27,652 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:47:16] 2025-10-13 19:43:27,652 | INFO     | sum of square deviations: 1088905205.99342
[2025-10-13 21:47:16] 2025-10-13 19:43:27,653 | INFO     | sum of deviations: 9418326444.532892
[2025-10-13 21:47:16] 2025-10-13 19:43:27,653 | INFO     | mean x: 1760379987.506579
[2025-10-13 21:47:16] 2025-10-13 19:43:27,653 | INFO     | mean y: 2286848.9671052634
[2025-10-13 21:47:16] 2025-10-13 19:43:27,653 | INFO     | -- intersect: -15223862587.644077
[2025-10-13 21:47:16] 2025-10-13 19:43:27,654 | INFO     | intersect: -15223862587.644077
[2025-10-13 21:47:16] 2025-10-13 19:43:27,654 | INFO     | chi2: 1.917234624993648
[2025-10-13 21:47:16] 2025-10-13 19:43:27,654 | INFO     | sum of square deviations: 984940770.9931941
[2025-10-13 21:47:16] 2025-10-13 19:43:27,655 | INFO     | sum of deviations: 18295353035.93877
[2025-10-13 21:47:16] 2025-10-13 19:43:27,655 | INFO     | mean x: 1760379835.0068028
[2025-10-13 21:47:16] 2025-10-13 19:43:27,655 | INFO     | mean y: 2299501.06122449
[2025-10-13 21:47:16] 2025-10-13 19:43:27,655 | INFO     | -- intersect: -32696895727.01371
[2025-10-13 21:47:16] 2025-10-13 19:43:27,655 | INFO     | intersect: -32696895727.01371
[2025-10-13 21:47:16] 2025-10-13 19:43:27,656 | INFO     | chi2: 1.1198644337304995
[2025-10-13 21:47:16] 2025-10-13 19:43:27,656 | INFO     | current chi2=1.1198644337304995 (change=41.58959893945116 %)
[2025-10-13 21:47:16] 2025-10-13 19:43:27,656 | INFO     | sum of square deviations: 887813673.4929576
[2025-10-13 21:47:16] 2025-10-13 19:43:27,657 | INFO     | sum of deviations: 17556701109.140842
[2025-10-13 21:47:16] 2025-10-13 19:43:27,657 | INFO     | mean x: 1760379682.5070422
[2025-10-13 21:47:16] 2025-10-13 19:43:27,657 | INFO     | mean y: 2298340.8591549294
[2025-10-13 21:47:16] 2025-10-13 19:43:27,657 | INFO     | -- intersect: -34809578122.79564
[2025-10-13 21:47:16] 2025-10-13 19:43:27,657 | INFO     | intersect: -34809578122.79564
[2025-10-13 21:47:16] 2025-10-13 19:43:27,658 | INFO     | chi2: 1.1206060011562393
[2025-10-13 21:47:16] 2025-10-13 19:43:27,658 | INFO     | current chi2=1.1206060011562393 (change=-0.06621939258036053 %)
[2025-10-13 21:47:16] 2025-10-13 19:43:27,658 | INFO     | right removable region: 141
[2025-10-13 21:47:16] 2025-10-13 19:43:27,658 | INFO     | sum of square deviations: 984940160.9931941
[2025-10-13 21:47:16] 2025-10-13 19:43:27,659 | INFO     | sum of deviations: -6269226098.210886
[2025-10-13 21:47:16] 2025-10-13 19:43:27,659 | INFO     | mean x: 1760380140.0068028
[2025-10-13 21:47:16] 2025-10-13 19:43:27,659 | INFO     | mean y: 2309419.2108843536
[2025-10-13 21:47:16] 2025-10-13 19:43:27,659 | INFO     | -- intersect: 11207275521.28766
[2025-10-13 21:47:16] 2025-10-13 19:43:27,659 | INFO     | intersect: 11207275521.28766
[2025-10-13 21:47:16] 2025-10-13 19:43:27,660 | INFO     | chi2: 0.8196420126805878
[2025-10-13 21:47:16] 2025-10-13 19:43:27,660 | INFO     | current chi2=0.8196420126805878 (change=57.24873721789251 %)
[2025-10-13 21:47:16] 2025-10-13 19:43:27,660 | INFO     | sum of square deviations: 887812453.4929576
[2025-10-13 21:47:16] 2025-10-13 19:43:27,661 | INFO     | sum of deviations: -6681501410.169014
[2025-10-13 21:47:16] 2025-10-13 19:43:27,661 | INFO     | mean x: 1760380292.5070422
[2025-10-13 21:47:16] 2025-10-13 19:43:27,661 | INFO     | mean y: 2310070.1690140846
[2025-10-13 21:47:16] 2025-10-13 19:43:27,661 | INFO     | -- intersect: 13250584928.833004
[2025-10-13 21:47:16] 2025-10-13 19:43:27,661 | INFO     | intersect: 13250584928.833004
[2025-10-13 21:47:16] 2025-10-13 19:43:27,662 | INFO     | chi2: 0.8196358945912111
[2025-10-13 21:47:16] 2025-10-13 19:43:27,662 | INFO     | current chi2=0.8196358945912111 (change=0.0007464343313324439 %)
[2025-10-13 21:47:16] 2025-10-13 19:43:27,662 | INFO     | left removable region: 20
[2025-10-13 21:47:16] 2025-10-13 19:43:27,662 | INFO     | sum of square deviations: 549292678.9917359
[2025-10-13 21:47:16] 2025-10-13 19:43:27,663 | INFO     | sum of deviations: 1387692446.7438016
[2025-10-13 21:47:16] 2025-10-13 19:43:27,663 | INFO     | mean x: 1760380262.0082645
[2025-10-13 21:47:16] 2025-10-13 19:43:27,663 | INFO     | mean y: 2325228.256198347
[2025-10-13 21:47:16] 2025-10-13 19:43:27,663 | INFO     | -- intersect: -4444969422.511387
[2025-10-13 21:47:16] 2025-10-13 19:43:27,663 | INFO     | intersect: -4444969422.511387
[2025-10-13 21:47:16] 2025-10-13 19:43:27,663 | INFO     | chi2: 9.612329295167769e-05
[2025-10-13 21:47:16] 2025-10-13 19:43:27,664 | INFO     | -- intersect: -4444969422.511387
[2025-10-13 21:47:16] 2025-10-13 19:43:27,664 | INFO     | current memory leak: 2.53 B/s (using 121 data points, chi2=0.00)
[2025-10-13 21:47:16] 2025-10-13 19:43:27,664 | INFO     | could have reported an average CPU frequency of 2737 MHz (9 samples)
[2025-10-13 21:47:16] 2025-10-13 19:43:27,664 | INFO     | ..............................
[2025-10-13 21:47:16] 2025-10-13 19:43:27,664 | INFO     | . Timing measurements:
[2025-10-13 21:47:16] 2025-10-13 19:43:27,664 | INFO     | . get job = 0 s
[2025-10-13 21:47:16] 2025-10-13 19:43:27,665 | INFO     | . initial setup = 1 s
[2025-10-13 21:47:16] 2025-10-13 19:43:27,665 | INFO     | . payload setup = 8 s
[2025-10-13 21:47:16] 2025-10-13 19:43:27,665 | INFO     | . stage-in = 0 s
[2025-10-13 21:47:16] 2025-10-13 19:43:27,665 | INFO     | . payload execution = 9218 s
[2025-10-13 21:47:16] 2025-10-13 19:43:27,665 | INFO     | . stage-out = 1 s
[2025-10-13 21:47:16] 2025-10-13 19:43:27,665 | INFO     | . log creation = 0 s
[2025-10-13 21:47:16] 2025-10-13 19:43:27,665 | INFO     | ..............................
[2025-10-13 21:47:16] 2025-10-13 19:43:27,768 | INFO     | 
[2025-10-13 21:47:16] 2025-10-13 19:43:27,768 | INFO     | job summary report
[2025-10-13 21:47:16] 2025-10-13 19:43:27,768 | INFO     | --------------------------------------------------
[2025-10-13 21:47:16] 2025-10-13 19:43:27,768 | INFO     | PanDA job id: 6838602721
[2025-10-13 21:47:16] 2025-10-13 19:43:27,768 | INFO     | task id: 46676269
[2025-10-13 21:47:16] 2025-10-13 19:43:27,768 | INFO     | errors: (none)
[2025-10-13 21:47:16] 2025-10-13 19:43:27,768 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:47:16] 2025-10-13 19:43:27,768 | INFO     | pilot state: finished 
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | transexitcode: 0
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | exeerrorcode: 0
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | exeerrordiag: 
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | exitcode: 0
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | exitmsg: OK
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | cpuconsumptiontime: 35012 s
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | nevents: 400
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | neventsw: 0
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | pid: 721422
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | pgrp: 721422
[2025-10-13 21:47:16] 2025-10-13 19:43:27,769 | INFO     | corecount: 4
[2025-10-13 21:47:16] 2025-10-13 19:43:27,770 | INFO     | event service: False
[2025-10-13 21:47:16] 2025-10-13 19:43:27,770 | INFO     | sizes: {0: 2348646, 1: 2348845, 6: 2349107, 11: 2349135, 9230: 2377861, 9232: 2386883, 9233: 2387067, 9240: 2387325}
[2025-10-13 21:47:16] 2025-10-13 19:43:27,770 | INFO     | --------------------------------------------------
[2025-10-13 21:47:16] 2025-10-13 19:43:27,770 | INFO     | 
[2025-10-13 21:47:16] 2025-10-13 19:43:27,770 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-10-13 21:47:16] 2025-10-13 19:43:27,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,801 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,801 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,801 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,801 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,801 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,802 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,803 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:47:16] 2025-10-13 19:43:27,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,803 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:47:16] 2025-10-13 19:43:27,803 | INFO     | job 6838602721 has completed (purged errors)
[2025-10-13 21:47:16] 2025-10-13 19:43:27,803 | INFO     | overall cleanup function is called
[2025-10-13 21:47:16] 2025-10-13 19:43:28,810 | INFO     | --- collectZombieJob: --- 10, [721422]
[2025-10-13 21:47:16] 2025-10-13 19:43:28,810 | INFO     | zombie collector waiting for pid 721422
[2025-10-13 21:47:16] 2025-10-13 19:43:28,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:47:16] 2025-10-13 19:43:28,811 | INFO     | collected zombie processes
[2025-10-13 21:47:16] 2025-10-13 19:43:28,811 | INFO     | will attempt to kill all subprocesses of pid=721422
[2025-10-13 21:47:16] 2025-10-13 19:43:29,596 | INFO     | process IDs to be killed: [721422] (in reverse order)
[2025-10-13 21:47:16] 2025-10-13 19:43:29,835 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:47:16] 2025-10-13 19:43:29,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:47:16] 2025-10-13 19:43:29,865 | INFO     | did not find any defunct processes belonging to 721422
[2025-10-13 21:47:16] 2025-10-13 19:43:29,894 | INFO     | did not find any defunct processes belonging to 721422
[2025-10-13 21:47:16] 2025-10-13 19:43:29,895 | INFO     | ready for new job
[2025-10-13 21:47:16] 2025-10-13 19:43:29,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:47:16] 2025-10-13 19:43:29,897 | INFO     | ***************************************
[2025-10-13 21:47:16] 2025-10-13 19:43:29,897 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:47:16] 2025-10-13 19:43:29,897 | INFO     | ***************************************
[2025-10-13 21:47:16] 2025-10-13 19:43:29,897 | INFO     | 
[2025-10-13 21:47:16] 2025-10-13 19:43:29,906 | INFO     | architecture information:
[2025-10-13 21:47:16] 2025-10-13 19:43:29,906 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:47:16] 2025-10-13 19:43:29,930 | INFO     | cat /etc/os-release:
[2025-10-13 21:47:16] NAME="CentOS Linux"
[2025-10-13 21:47:16] VERSION="7 (Core)"
[2025-10-13 21:47:16] ID="centos"
[2025-10-13 21:47:16] ID_LIKE="rhel fedora"
[2025-10-13 21:47:16] VERSION_ID="7"
[2025-10-13 21:47:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:47:16] ANSI_COLOR="0;31"
[2025-10-13 21:47:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:47:16] HOME_URL="https://www.centos.org/"
[2025-10-13 21:47:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:47:16] 
[2025-10-13 21:47:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:47:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:47:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:47:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:47:16] 
[2025-10-13 21:47:16] 2025-10-13 19:43:29,930 | INFO     | ***************************************
[2025-10-13 21:47:16] 2025-10-13 19:43:30,433 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-10-13 21:47:16] 2025-10-13 19:43:30,459 | INFO     | sufficient remaining disk space (3338590486528 B)
[2025-10-13 21:47:16] 2025-10-13 19:43:30,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:47:16] 2025-10-13 19:43:30,460 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:47:16] 2025-10-13 19:43:30,460 | INFO     | update_server=False
[2025-10-13 21:47:16] 2025-10-13 19:43:30,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:47:16] 2025-10-13 19:43:30,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:47:16] 2025-10-13 19:43:30,461 | INFO     | aborting loop
[2025-10-13 21:47:16] 2025-10-13 19:43:30,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:47:16] 2025-10-13 19:43:31,023 | INFO     | all payload control threads have been joined
[2025-10-13 21:47:16] 2025-10-13 19:43:31,028 | INFO     | all data control threads have been joined
[2025-10-13 21:47:16] 2025-10-13 19:43:31,464 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:31,465 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:31,626 | INFO     | all job control threads have been joined
[2025-10-13 21:47:16] 2025-10-13 19:43:31,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:47:16] 2025-10-13 19:43:31,874 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:31,929 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:32,028 | INFO     | [payload] control thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:32,033 | INFO     | [data] control thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:32,491 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:32,631 | INFO     | [job] control thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:32,639 | INFO     | [job] validate thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:32,641 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:32,658 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:32,727 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:32,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:47:16] 2025-10-13 19:43:33,067 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:33,783 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:35,650 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:43:40,961 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:47:16] 2025-10-13 19:43:41,966 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:47:16] 2025-10-13 19:44:01,333 | INFO     | PID=626446 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 21:47:16] 2025-10-13 19:44:01,333 | INFO     | .. there are 8 such processes running
[2025-10-13 21:47:16] 2025-10-13 19:44:01,334 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:47:16] 2025-10-13 19:44:01,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:47:16] 2025-10-13 19:44:01,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:47:16] 2025-10-13 19:44:24,301 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:47:16] 2025-10-13 19:44:25,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22423635326784)>', '<ExcThread(monitor, started 22423390869248)>']
[2025-10-13 21:47:16] 2025-10-13 19:44:26,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:47:16] 2025-10-13 19:44:26,457 | INFO     | [monitor] control thread has ended
[2025-10-13 21:47:16] 2025-10-13 19:44:30,805 | INFO     | all workflow threads have been joined
[2025-10-13 21:47:16] 2025-10-13 19:44:30,805 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:47:16] 2025-10-13 19:44:30,806 | INFO     | traces error code: 0
[2025-10-13 21:47:16] 2025-10-13 19:44:30,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:47:16] 2025-10-13 19:44:30,951 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:47:16] 2025-10-13 19:44:30,955 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:47:16] 2025-10-13 19:44:30,959 [wrapper] pilotpid: 626446
[2025-10-13 21:47:16] 2025-10-13 19:44:30,963 [wrapper] Pilot exit status: 0
[2025-10-13 21:47:16] 2025-10-13 19:44:30,978 [wrapper] pandaids: 6838602721 6838602721
[2025-10-13 21:47:16] 2025-10-13 19:44:31,145 [wrapper] cleanup supervisor_pilot 1180196 626450
[2025-10-13 21:47:16] 2025-10-13 19:44:31,149 [wrapper] Test setup, not cleaning
[2025-10-13 21:47:16] 2025-10-13 19:44:31,154 [wrapper] apfmon messages muted
[2025-10-13 21:47:16] 2025-10-13 19:44:31,158 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:47:16] 2025-10-13 19:44:31,162 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:47:16]  *** Error codes and diagnostics ***
[2025-10-13 21:47:16]     "exeErrorCode": 0,
[2025-10-13 21:47:16]     "exeErrorDiag": "",
[2025-10-13 21:47:16]     "pilotErrorCode": 0,
[2025-10-13 21:47:16]     "pilotErrorDiag": "",
[2025-10-13 21:47:16]  *** Listing of results directory ***
[2025-10-13 21:47:16] total 631748
[2025-10-13 21:47:16] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:01 pilot3.tar.gz
[2025-10-13 21:47:16] -rwx------ 1 boinc boinc     36292 Oct 11 16:53 runpilot2-wrapper.sh
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      5112 Oct 11 16:53 queuedata.json
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc       100 Oct 13 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:47:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 15:54 run_atlas
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc       105 Oct 13 15:54 job.xml
[2025-10-13 21:47:16] -rw-r--r-- 3 boinc boinc 223544798 Oct 13 15:54 EVNT.46676267._000505.pool.root.1
[2025-10-13 21:47:16] -rw-r--r-- 3 boinc boinc 223544798 Oct 13 15:54 ATLAS.root_0
[2025-10-13 21:47:16] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:54 start_atlas.sh
[2025-10-13 21:47:16] drwxrwx--x 2 boinc boinc      4096 Oct 13 15:54 shared
[2025-10-13 21:47:16] -rw-r--r-- 2 boinc boinc    569680 Oct 13 15:54 input.tar.gz
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:54 boinc_lockfile
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      6693 Oct 13 19:08 init_data.xml
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      2549 Oct 13 19:08 pandaJob.out
[2025-10-13 21:47:16] -rw------- 1 boinc boinc    972783 Oct 13 19:09 agis_schedconf.cvmfs.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc   1560580 Oct 13 19:09 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc 192651287 Oct 13 21:42 HITS.46676269._059660.pool.root.1
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc       530 Oct 13 21:42 boinc_task_state.xml
[2025-10-13 21:47:16] -rw------- 1 boinc boinc      1026 Oct 13 21:43 memory_monitor_summary.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc    336481 Oct 13 21:43 log.46676269._059660.job.log.tgz.1
[2025-10-13 21:47:16] -rw------- 1 boinc boinc      7777 Oct 13 21:43 heartbeat.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc        97 Oct 13 21:44 pilot_heartbeat.json
[2025-10-13 21:47:16] -rw------- 1 boinc boinc      4906 Oct 13 21:44 pilotlog.txt
[2025-10-13 21:47:16] -rw------- 1 boinc boinc   1287866 Oct 13 21:44 log.46676269._059660.job.log.1
[2025-10-13 21:47:16] -rw------- 1 boinc boinc       357 Oct 13 21:44 output.list
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:44 runtime_log
[2025-10-13 21:47:16] -rw------- 1 boinc boinc   1648640 Oct 13 21:44 result.tar.gz
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      9161 Oct 13 21:44 runtime_log.err
[2025-10-13 21:47:16] -rw------- 1 boinc boinc       788 Oct 13 21:44 rNbNDms9pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJ6RMDmkVleim.diag
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:47 wrapper_checkpoint.txt
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:47 boinc_mmap_file
[2025-10-13 21:47:16] -rw-r--r-- 1 boinc boinc     22657 Oct 13 21:47 stderr.txt
[2025-10-13 21:47:16] HITS file was successfully produced:
[2025-10-13 21:47:16] -rw------- 1 boinc boinc 192651287 Oct 13 21:42 shared/HITS.pool.root.1
[2025-10-13 21:47:16]  *** Contents of shared directory: ***
[2025-10-13 21:47:16] total 408644
[2025-10-13 21:47:16] -rw-r--r-- 3 boinc boinc 223544798 Oct 13 15:54 ATLAS.root_0
[2025-10-13 21:47:16] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:54 start_atlas.sh
[2025-10-13 21:47:16] -rw-r--r-- 2 boinc boinc    569680 Oct 13 15:54 input.tar.gz
[2025-10-13 21:47:16] -rw------- 1 boinc boinc 192651287 Oct 13 21:42 HITS.pool.root.1
[2025-10-13 21:47:16] -rw------- 1 boinc boinc   1648640 Oct 13 21:44 result.tar.gz
21:47:17 (596189): run_atlas exited; CPU time 35622.505472
21:47:17 (596189): called boinc_finish(0)

</stderr_txt>
]]>

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