Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:03 (1474502): wrapper (7.7.26015): starting
19:01:03 (1474502): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:01:04] Arguments: --nthreads 8
[2025-10-11 19:01:04] Threads: 8
[2025-10-11 19:01:04] Checking for CVMFS
[2025-10-11 19:01:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:01:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:01:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:01:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:01:05] 2.13.2.0 654572 128453 484408 151599 3 636 23158803 32935937 45498 16776704 0 445856647 99.679 368919526 16893 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:01:05] CVMFS is ok
[2025-10-11 19:01:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:01:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:01:06] Further information can be found at the LHC@home message board.
[2025-10-11 19:01:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:01:06] Checking for apptainer binary...
[2025-10-11 19:01:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:01:06] Running /usr/bin/apptainer --version
[2025-10-11 19:01:06] apptainer version 1.4.3-1.el9
[2025-10-11 19:01:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:01:07] c7-3-28.aglt2.org
[2025-10-11 19:01:07] apptainer works
[2025-10-11 19:01:07] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:01:07] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:01:07] Starting ATLAS job with PandaID=6828208730
[2025-10-11 19:01:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:24:51]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:24:51] 2025-10-12 01:23:44,854 | INFO     | current chi2=0.10785066815751496 (change=95.41904937930865 %)
[2025-10-11 21:24:51] 2025-10-12 01:23:44,854 | INFO     | sum of square deviations: 665609553.9689934
[2025-10-11 21:24:51] 2025-10-12 01:23:44,855 | INFO     | sum of deviations: 214651217.24031013
[2025-10-11 21:24:51] 2025-10-12 01:23:44,855 | INFO     | mean x: 1760228251.015504
[2025-10-11 21:24:51] 2025-10-12 01:23:44,855 | INFO     | mean y: 2482256.379844961
[2025-10-11 21:24:51] 2025-10-12 01:23:44,855 | INFO     | -- intersect: -565170558.1692399
[2025-10-11 21:24:51] 2025-10-12 01:23:44,855 | INFO     | intersect: -565170558.1692399
[2025-10-11 21:24:51] 2025-10-12 01:23:44,855 | INFO     | chi2: 0.04582712810312839
[2025-10-11 21:24:51] 2025-10-12 01:23:44,855 | INFO     | current chi2=0.04582712810312839 (change=57.50872119197419 %)
[2025-10-11 21:24:51] 2025-10-12 01:23:44,856 | INFO     | sum of square deviations: 591170338.9677436
[2025-10-11 21:24:51] 2025-10-12 01:23:44,856 | INFO     | sum of deviations: 3512426516.3548384
[2025-10-11 21:24:51] 2025-10-12 01:23:44,856 | INFO     | mean x: 1760228403.516129
[2025-10-11 21:24:51] 2025-10-12 01:23:44,857 | INFO     | mean y: 2475419.8225806453
[2025-10-11 21:24:51] 2025-10-12 01:23:44,857 | INFO     | -- intersect: -10455885752.604822
[2025-10-11 21:24:51] 2025-10-12 01:23:44,857 | INFO     | intersect: -10455885752.604822
[2025-10-11 21:24:51] 2025-10-12 01:23:44,857 | INFO     | chi2: 0.0014561922492288101
[2025-10-11 21:24:51] 2025-10-12 01:23:44,857 | INFO     | current chi2=0.0014561922492288101 (change=96.82242307230811 %)
[2025-10-11 21:24:51] 2025-10-12 01:23:44,857 | INFO     | sum of square deviations: 522498673.9663862
[2025-10-11 21:24:51] 2025-10-12 01:23:44,857 | INFO     | sum of deviations: 2658849365.932773
[2025-10-11 21:24:51] 2025-10-12 01:23:44,858 | INFO     | mean x: 1760228556.0168068
[2025-10-11 21:24:51] 2025-10-12 01:23:44,858 | INFO     | mean y: 2477312.0336134452
[2025-10-11 21:24:51] 2025-10-12 01:23:44,858 | INFO     | -- intersect: -8954832654.96381
[2025-10-11 21:24:51] 2025-10-12 01:23:44,858 | INFO     | intersect: -8954832654.96381
[2025-10-11 21:24:51] 2025-10-12 01:23:44,858 | INFO     | chi2: 0.0009061850277662893
[2025-10-11 21:24:51] 2025-10-12 01:23:44,858 | INFO     | current chi2=0.0009061850277662893 (change=37.77023409881498 %)
[2025-10-11 21:24:51] 2025-10-12 01:23:44,858 | INFO     | sum of square deviations: 459361996.4649136
[2025-10-11 21:24:51] 2025-10-12 01:23:44,859 | INFO     | sum of deviations: 2064915891.5701761
[2025-10-11 21:24:51] 2025-10-12 01:23:44,859 | INFO     | mean x: 1760228708.5175438
[2025-10-11 21:24:51] 2025-10-12 01:23:44,859 | INFO     | mean y: 2478740.464912281
[2025-10-11 21:24:51] 2025-10-12 01:23:44,859 | INFO     | -- intersect: -7910070101.162099
[2025-10-11 21:24:51] 2025-10-12 01:23:44,859 | INFO     | intersect: -7910070101.162099
[2025-10-11 21:24:51] 2025-10-12 01:23:44,859 | INFO     | chi2: 0.0006496664425707847
[2025-10-11 21:24:51] 2025-10-12 01:23:44,860 | INFO     | current chi2=0.0006496664425707847 (change=28.307528521831003 %)
[2025-10-11 21:24:51] 2025-10-12 01:23:44,860 | INFO     | sum of square deviations: 401527743.9633025
[2025-10-11 21:24:51] 2025-10-12 01:23:44,860 | INFO     | sum of deviations: 1696952403.6330276
[2025-10-11 21:24:51] 2025-10-12 01:23:44,860 | INFO     | mean x: 1760228861.0183487
[2025-10-11 21:24:51] 2025-10-12 01:23:44,860 | INFO     | mean y: 2479711.1834862386
[2025-10-11 21:24:51] 2025-10-12 01:23:44,860 | INFO     | -- intersect: -7436668994.123192
[2025-10-11 21:24:51] 2025-10-12 01:23:44,861 | INFO     | intersect: -7436668994.123192
[2025-10-11 21:24:51] 2025-10-12 01:23:44,861 | INFO     | chi2: 0.0006110517634927392
[2025-10-11 21:24:51] 2025-10-12 01:23:44,861 | INFO     | current chi2=0.0006110517634927392 (change=5.943769994528879 %)
[2025-10-11 21:24:51] 2025-10-12 01:23:44,861 | INFO     | left removable region: 60
[2025-10-11 21:24:51] 2025-10-12 01:23:44,861 | INFO     | sum of square deviations: 120602002.98630133
[2025-10-11 21:24:51] 2025-10-12 01:23:44,861 | INFO     | sum of deviations: 533581152.84931505
[2025-10-11 21:24:51] 2025-10-12 01:23:44,862 | INFO     | mean x: 1760229593.0136986
[2025-10-11 21:24:51] 2025-10-12 01:23:44,862 | INFO     | mean y: 2485020.1506849313
[2025-10-11 21:24:51] 2025-10-12 01:23:44,862 | INFO     | -- intersect: -7785323741.420319
[2025-10-11 21:24:51] 2025-10-12 01:23:44,862 | INFO     | intersect: -7785323741.420319
[2025-10-11 21:24:51] 2025-10-12 01:23:44,862 | INFO     | chi2: 9.140174118448393e-05
[2025-10-11 21:24:51] 2025-10-12 01:23:44,862 | INFO     | -- intersect: -7785323741.420319
[2025-10-11 21:24:51] 2025-10-12 01:23:44,862 | INFO     | current memory leak: 4.42 B/s (using 73 data points, chi2=0.00)
[2025-10-11 21:24:51] 2025-10-12 01:23:44,863 | INFO     | could have reported an average CPU frequency of 3082 MHz (8 samples)
[2025-10-11 21:24:51] 2025-10-12 01:23:44,863 | INFO     | ..............................
[2025-10-11 21:24:51] 2025-10-12 01:23:44,863 | INFO     | . Timing measurements:
[2025-10-11 21:24:51] 2025-10-12 01:23:44,863 | INFO     | . get job = 0 s
[2025-10-11 21:24:51] 2025-10-12 01:23:44,863 | INFO     | . initial setup = 3 s
[2025-10-11 21:24:51] 2025-10-12 01:23:44,863 | INFO     | . payload setup = 15 s
[2025-10-11 21:24:51] 2025-10-12 01:23:44,863 | INFO     | . stage-in = 0 s
[2025-10-11 21:24:51] 2025-10-12 01:23:44,864 | INFO     | . payload execution = 8474 s
[2025-10-11 21:24:51] 2025-10-12 01:23:44,864 | INFO     | . stage-out = 1 s
[2025-10-11 21:24:51] 2025-10-12 01:23:44,864 | INFO     | . log creation = 0 s
[2025-10-11 21:24:51] 2025-10-12 01:23:44,864 | INFO     | ..............................
[2025-10-11 21:24:51] 2025-10-12 01:23:45,079 | INFO     | time since job start (8535s) is within the limit (172800.0s)
[2025-10-11 21:24:51] 2025-10-12 01:23:45,299 | INFO     | 
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | job summary report
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | --------------------------------------------------
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | PanDA job id: 6828208730
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | task id: 46376994
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | errors: (none)
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | pilot state: finished 
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | transexitcode: 0
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | exeerrorcode: 0
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | exeerrordiag: 
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | exitcode: 0
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | exitmsg: OK
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | cpuconsumptiontime: 36173 s
[2025-10-11 21:24:51] 2025-10-12 01:23:45,300 | INFO     | nevents: 400
[2025-10-11 21:24:51] 2025-10-12 01:23:45,301 | INFO     | neventsw: 0
[2025-10-11 21:24:51] 2025-10-12 01:23:45,301 | INFO     | pid: 1485566
[2025-10-11 21:24:51] 2025-10-12 01:23:45,301 | INFO     | pgrp: 1485566
[2025-10-11 21:24:51] 2025-10-12 01:23:45,301 | INFO     | corecount: 8
[2025-10-11 21:24:51] 2025-10-12 01:23:45,301 | INFO     | event service: False
[2025-10-11 21:24:51] 2025-10-12 01:23:45,301 | INFO     | sizes: {0: 2348042, 1: 2348727, 2: 2348926, 12: 2349188, 13: 2349216, 8493: 2377256, 8496: 2386310, 8511: 2386448}
[2025-10-11 21:24:51] 2025-10-12 01:23:45,301 | INFO     | --------------------------------------------------
[2025-10-11 21:24:51] 2025-10-12 01:23:45,301 | INFO     | 
[2025-10-11 21:24:51] 2025-10-12 01:23:45,339 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 21:24:51] 2025-10-12 01:23:45,434 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,434 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,434 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,434 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,434 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,434 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:24:51] 2025-10-12 01:23:45,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,436 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:24:51] 2025-10-12 01:23:45,436 | INFO     | job 6828208730 has completed (purged errors)
[2025-10-11 21:24:51] 2025-10-12 01:23:45,436 | INFO     | overall cleanup function is called
[2025-10-11 21:24:51] 2025-10-12 01:23:46,444 | INFO     | --- collectZombieJob: --- 10, [1485566]
[2025-10-11 21:24:51] 2025-10-12 01:23:46,445 | INFO     | zombie collector waiting for pid 1485566
[2025-10-11 21:24:51] 2025-10-12 01:23:46,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:24:51] 2025-10-12 01:23:46,445 | INFO     | collected zombie processes
[2025-10-11 21:24:51] 2025-10-12 01:23:46,445 | INFO     | will attempt to kill all subprocesses of pid=1485566
[2025-10-11 21:24:51] 2025-10-12 01:23:49,745 | INFO     | PID=1478422 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 21:24:51] 2025-10-12 01:23:49,746 | INFO     | .. there are 51 such processes running
[2025-10-11 21:24:51] 2025-10-12 01:23:49,859 | INFO     | process IDs to be killed: [1485566] (in reverse order)
[2025-10-11 21:24:51] 2025-10-12 01:23:50,148 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:24:51] 2025-10-12 01:23:50,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:24:51] 2025-10-12 01:23:50,174 | INFO     | did not find any defunct processes belonging to 1485566
[2025-10-11 21:24:51] 2025-10-12 01:23:50,199 | INFO     | did not find any defunct processes belonging to 1485566
[2025-10-11 21:24:51] 2025-10-12 01:23:50,200 | INFO     | ready for new job
[2025-10-11 21:24:51] 2025-10-12 01:23:50,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:24:51] 2025-10-12 01:23:50,202 | INFO     | ***************************************
[2025-10-11 21:24:51] 2025-10-12 01:23:50,203 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 21:24:51] 2025-10-12 01:23:50,203 | INFO     | ***************************************
[2025-10-11 21:24:51] 2025-10-12 01:23:50,203 | INFO     | 
[2025-10-11 21:24:51] 2025-10-12 01:23:50,209 | INFO     | architecture information:
[2025-10-11 21:24:51] 2025-10-12 01:23:50,209 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:24:51] 2025-10-12 01:23:50,235 | INFO     | cat /etc/os-release:
[2025-10-11 21:24:51] NAME="CentOS Linux"
[2025-10-11 21:24:51] VERSION="7 (Core)"
[2025-10-11 21:24:51] ID="centos"
[2025-10-11 21:24:51] ID_LIKE="rhel fedora"
[2025-10-11 21:24:51] VERSION_ID="7"
[2025-10-11 21:24:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:24:51] ANSI_COLOR="0;31"
[2025-10-11 21:24:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:24:51] HOME_URL="https://www.centos.org/"
[2025-10-11 21:24:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:24:51] 
[2025-10-11 21:24:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:24:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:24:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:24:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:24:51] 
[2025-10-11 21:24:51] 2025-10-12 01:23:50,236 | INFO     | ***************************************
[2025-10-11 21:24:51] 2025-10-12 01:23:50,739 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 21:24:51] 2025-10-12 01:23:50,852 | INFO     | sufficient remaining disk space (73543974912 B)
[2025-10-11 21:24:51] 2025-10-12 01:23:50,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:24:51] 2025-10-12 01:23:50,852 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:24:51] 2025-10-12 01:23:50,852 | INFO     | update_server=False
[2025-10-11 21:24:51] 2025-10-12 01:23:50,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:24:51] 2025-10-12 01:23:50,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:24:51] 2025-10-12 01:23:50,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:24:51] 2025-10-12 01:23:50,913 | INFO     | all data control threads have been joined
[2025-10-11 21:24:51] 2025-10-12 01:23:51,279 | INFO     | all payload control threads have been joined
[2025-10-11 21:24:51] 2025-10-12 01:23:51,527 | INFO     | all job control threads have been joined
[2025-10-11 21:24:51] 2025-10-12 01:23:51,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:24:51] 2025-10-12 01:23:51,776 | INFO     | aborting loop
[2025-10-11 21:24:51] 2025-10-12 01:23:51,859 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:51,860 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:51,866 | INFO     | [job] validate thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:51,919 | INFO     | [data] control thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,285 | INFO     | [payload] control thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,413 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,447 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,533 | INFO     | [job] control thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,686 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,778 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,782 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,803 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,815 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:52,866 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:23:54,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:24:51] 2025-10-12 01:23:58,339 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:24:51] 2025-10-12 01:24:23,045 | INFO     | PID=1478422 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:24:51] 2025-10-12 01:24:23,045 | INFO     | .. there are 51 such processes running
[2025-10-11 21:24:51] 2025-10-12 01:24:23,046 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:24:51] 2025-10-12 01:24:23,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:24:51] 2025-10-12 01:24:23,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:24:51] 2025-10-12 01:24:44,420 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:24:51] 2025-10-12 01:24:44,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963629627200)>', '<ExcThread(monitor, started 139963286927104)>']
[2025-10-11 21:24:51] 2025-10-12 01:24:45,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:24:51] 2025-10-12 01:24:45,185 | INFO     | [monitor] control thread has ended
[2025-10-11 21:24:51] 2025-10-12 01:24:49,505 | INFO     | all workflow threads have been joined
[2025-10-11 21:24:51] 2025-10-12 01:24:49,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:24:51] 2025-10-12 01:24:49,505 | INFO     | traces error code: 0
[2025-10-11 21:24:51] 2025-10-12 01:24:49,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:24:51] 2025-10-12 01:24:49,904 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:24:51] 2025-10-12 01:24:49,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:24:51] 2025-10-12 01:24:49,968 [wrapper] pilotpid: 1478422
[2025-10-11 21:24:51] 2025-10-12 01:24:50,004 [wrapper] Pilot exit status: 0
[2025-10-11 21:24:51] 2025-10-12 01:24:50,153 [wrapper] pandaids: 6828208730
[2025-10-11 21:24:51] 2025-10-12 01:24:50,328 [wrapper] cleanup supervisor_pilot 2106335 1478423
[2025-10-11 21:24:51] 2025-10-12 01:24:50,341 [wrapper] Test setup, not cleaning
[2025-10-11 21:24:51] 2025-10-12 01:24:50,364 [wrapper] apfmon messages muted
[2025-10-11 21:24:51] 2025-10-12 01:24:50,412 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:24:51] 2025-10-12 01:24:50,473 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:24:51]  *** Error codes and diagnostics ***
[2025-10-11 21:24:51]     "exeErrorCode": 0,
[2025-10-11 21:24:51]     "exeErrorDiag": "",
[2025-10-11 21:24:51]     "pilotErrorCode": 0,
[2025-10-11 21:24:51]     "pilotErrorDiag": "",
[2025-10-11 21:24:51]  *** Listing of results directory ***
[2025-10-11 21:24:51] total 420312
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas    552446 Oct  3 04:22 pilot3.tar.gz
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas      5112 Oct  3 04:27 queuedata.json
[2025-10-11 21:24:51] -rwx------. 1 boincer umatlas     36292 Oct  3 04:28 runpilot2-wrapper.sh
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:24:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:00 run_atlas
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:00 job.xml
[2025-10-11 21:24:51] -rw-r--r--. 2 boincer umatlas 227152632 Oct 11 19:01 EVNT.46376992._000543.pool.root.1
[2025-10-11 21:24:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:01 start_atlas.sh
[2025-10-11 21:24:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:01 shared
[2025-10-11 21:24:51] -rw-r--r--. 2 boincer umatlas    565608 Oct 11 19:01 input.tar.gz
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:01 boinc_lockfile
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas      2560 Oct 11 19:01 pandaJob.out
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas    975520 Oct 11 19:01 agis_schedconf.cvmfs.json
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:01 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:24:51] drwx------. 4 boincer umatlas      4096 Oct 11 19:01 pilot3
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas      6935 Oct 11 21:22 init_data.xml
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas 196374592 Oct 11 21:22 HITS.46376994._015247.pool.root.1
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas       530 Oct 11 21:22 boinc_task_state.xml
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas      1043 Oct 11 21:23 memory_monitor_summary.json
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas    392580 Oct 11 21:23 log.46376994._015247.job.log.tgz.1
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas      7788 Oct 11 21:23 heartbeat.json
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas        95 Oct 11 21:24 pilot_heartbeat.json
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas        27 Oct 11 21:24 wrapper_checkpoint.txt
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:24 boinc_mmap_file
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas      4824 Oct 11 21:24 pilotlog.txt
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas   1094543 Oct 11 21:24 log.46376994._015247.job.log.1
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas       357 Oct 11 21:24 output.list
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:24 runtime_log
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas   1505280 Oct 11 21:24 result.tar.gz
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas       655 Oct 11 21:24 ymQODmXKqO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCNHNDmuSOIEo.diag
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 21:24 runtime_log.err
[2025-10-11 21:24:51] -rw-r--r--. 1 boincer umatlas     21217 Oct 11 21:24 stderr.txt
[2025-10-11 21:24:51] HITS file was successfully produced:
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas 196374592 Oct 11 21:22 shared/HITS.pool.root.1
[2025-10-11 21:24:51]  *** Contents of shared directory: ***
[2025-10-11 21:24:51] total 415660
[2025-10-11 21:24:51] -rw-r--r--. 2 boincer umatlas 227152632 Oct 11 19:01 ATLAS.root_0
[2025-10-11 21:24:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:01 start_atlas.sh
[2025-10-11 21:24:51] -rw-r--r--. 2 boincer umatlas    565608 Oct 11 19:01 input.tar.gz
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas 196374592 Oct 11 21:22 HITS.pool.root.1
[2025-10-11 21:24:51] -rw-------. 1 boincer umatlas   1505280 Oct 11 21:24 result.tar.gz
21:24:52 (1474502): run_atlas exited; CPU time 36502.286275
21:24:52 (1474502): called boinc_finish(0)

</stderr_txt>
]]>

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