Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
18:44:49 (650743): wrapper (7.7.26015): starting
18:44:49 (650743): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 18:44:49] Arguments: --nthreads 4
[2025-10-11 18:44:49] Threads: 4
[2025-10-11 18:44:49] Checking for CVMFS
[2025-10-11 18:44:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:44:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:44:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:44:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:44:49] 2.11.5.0 2691367 3572 109624 151599 3 188 2975290 4096001 6454 130560 0 17681006 99.998 122954 2766 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 18:44:49] CVMFS is ok
[2025-10-11 18:44:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:44:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 18:44:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 18:44:49] Further information can be found at the LHC@home message board.
[2025-10-11 18:44:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:44:49] Checking for apptainer binary...
[2025-10-11 18:44:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:44:49] Running /usr/bin/apptainer --version
[2025-10-11 18:44:49] apptainer version 1.4.3
[2025-10-11 18:44:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:44:49] x32-linux3
[2025-10-11 18:44:49] apptainer works
[2025-10-11 18:44:49] Set ATHENA_PROC_NUMBER=4
[2025-10-11 18:44:49] Set ATHENA_CORE_NUMBER=4
[2025-10-11 18:44:49] Starting ATLAS job with PandaID=6838603121
[2025-10-11 18:44:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:41:33]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:41:33] 2025-10-12 00:41:01,431 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 20:41:33] 2025-10-12 00:41:01,435 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3851.4213437500007
[2025-10-11 20:41:33] 2025-10-12 00:41:01,440 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6838603121/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:41:33] 2025-10-12 00:41:01,440 | INFO     | extracted standard info from prmon json
[2025-10-11 20:41:33] 2025-10-12 00:41:01,441 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:41:33] 2025-10-12 00:41:01,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:41:33] 2025-10-12 00:41:01,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:41:33] 2025-10-12 00:41:01,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:41:33] 2025-10-12 00:41:01,442 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:41:33] 2025-10-12 00:41:01,443 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 20:41:33] 2025-10-12 00:41:01,443 | INFO     | sum of deviations: 2009485698.5000021
[2025-10-11 20:41:33] 2025-10-12 00:41:01,443 | INFO     | mean x: 1760226166.5
[2025-10-11 20:41:33] 2025-10-12 00:41:01,443 | INFO     | mean y: 2319797.3421052634
[2025-10-11 20:41:33] 2025-10-12 00:41:01,443 | INFO     | -- intersect: -7697735307.771829
[2025-10-11 20:41:33] 2025-10-12 00:41:01,443 | INFO     | intersect: -7697735307.771829
[2025-10-11 20:41:33] 2025-10-12 00:41:01,444 | INFO     | chi2: 1.136176966941383
[2025-10-11 20:41:33] 2025-10-12 00:41:01,444 | INFO     | sum of square deviations: 401533110.0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,444 | INFO     | sum of deviations: 2115433152.0000024
[2025-10-11 20:41:33] 2025-10-12 00:41:01,444 | INFO     | mean x: 1760226014.0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,444 | INFO     | mean y: 2320076.8256880734
[2025-10-11 20:41:33] 2025-10-12 00:41:01,444 | INFO     | -- intersect: -9271237625.622364
[2025-10-11 20:41:33] 2025-10-12 00:41:01,444 | INFO     | intersect: -9271237625.622364
[2025-10-11 20:41:33] 2025-10-12 00:41:01,445 | INFO     | chi2: 1.137574746820482
[2025-10-11 20:41:33] 2025-10-12 00:41:01,445 | INFO     | current chi2=1.137574746820482 (change=-0.12302483853917641 %)
[2025-10-11 20:41:33] 2025-10-12 00:41:01,445 | INFO     | right removable region: 108
[2025-10-11 20:41:33] 2025-10-12 00:41:01,445 | INFO     | sum of square deviations: 401533110.0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,445 | INFO     | sum of deviations: -8200128129.999999
[2025-10-11 20:41:33] 2025-10-12 00:41:01,445 | INFO     | mean x: 1760226319.0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,445 | INFO     | mean y: 2345876.0458715595
[2025-10-11 20:41:33] 2025-10-12 00:41:01,446 | INFO     | -- intersect: 35949770868.217125
[2025-10-11 20:41:33] 2025-10-12 00:41:01,446 | INFO     | intersect: 35949770868.217125
[2025-10-11 20:41:33] 2025-10-12 00:41:01,446 | INFO     | chi2: 0.025586743444425346
[2025-10-11 20:41:33] 2025-10-12 00:41:01,446 | INFO     | current chi2=0.025586743444425346 (change=97.74799664234477 %)
[2025-10-11 20:41:33] 2025-10-12 00:41:01,446 | INFO     | sum of square deviations: 348769330.0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,446 | INFO     | sum of deviations: -6935999235.5
[2025-10-11 20:41:33] 2025-10-12 00:41:01,446 | INFO     | mean x: 1760226471.5
[2025-10-11 20:41:33] 2025-10-12 00:41:01,446 | INFO     | mean y: 2342208.028846154
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | -- intersect: 35008085002.64574
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | intersect: 35008085002.64574
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | chi2: 0.02532869861116018
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | current chi2=0.02532869861116018 (change=1.0085098708463625 %)
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | left removable region: 20
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | sum of square deviations: 211285822.0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | sum of deviations: -3430551458.5
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | mean x: 1760226593.5
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | mean y: 2332675.602272727
[2025-10-11 20:41:33] 2025-10-12 00:41:01,447 | INFO     | -- intersect: 28582328486.30987
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | intersect: 28582328486.30987
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | chi2: 0.01962433745532238
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | -- intersect: 28582328486.30987
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | current memory leak: -16.24 B/s (using 88 data points, chi2=0.02)
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | could have reported an average CPU frequency of 3893 MHz (7 samples)
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | ..............................
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | . Timing measurements:
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | . get job = 0 s
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | . initial setup = 2 s
[2025-10-11 20:41:33] 2025-10-12 00:41:01,448 | INFO     | . payload setup = 3 s
[2025-10-11 20:41:33] 2025-10-12 00:41:01,449 | INFO     | . stage-in = 0 s
[2025-10-11 20:41:33] 2025-10-12 00:41:01,449 | INFO     | . payload execution = 6936 s
[2025-10-11 20:41:33] 2025-10-12 00:41:01,449 | INFO     | . stage-out = 0 s
[2025-10-11 20:41:33] 2025-10-12 00:41:01,449 | INFO     | . log creation = 0 s
[2025-10-11 20:41:33] 2025-10-12 00:41:01,449 | INFO     | ..............................
[2025-10-11 20:41:33] 2025-10-12 00:41:01,515 | INFO     | 
[2025-10-11 20:41:33] 2025-10-12 00:41:01,515 | INFO     | job summary report
[2025-10-11 20:41:33] 2025-10-12 00:41:01,515 | INFO     | --------------------------------------------------
[2025-10-11 20:41:33] 2025-10-12 00:41:01,515 | INFO     | PanDA job id: 6838603121
[2025-10-11 20:41:33] 2025-10-12 00:41:01,515 | INFO     | task id: 46676269
[2025-10-11 20:41:33] 2025-10-12 00:41:01,515 | INFO     | errors: (none)
[2025-10-11 20:41:33] 2025-10-12 00:41:01,515 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:41:33] 2025-10-12 00:41:01,515 | INFO     | pilot state: finished 
[2025-10-11 20:41:33] 2025-10-12 00:41:01,515 | INFO     | transexitcode: 0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | exeerrorcode: 0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | exeerrordiag: 
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | exitcode: 0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | exitmsg: OK
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | cpuconsumptiontime: 26835 s
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | nevents: 400
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | neventsw: 0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | pid: 661226
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | pgrp: 661226
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | corecount: 4
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | event service: False
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 6943: 2376462, 6944: 2385474, 6947: 2385530, 6950: 2385852}
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | --------------------------------------------------
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | 
[2025-10-11 20:41:33] 2025-10-12 00:41:01,516 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-11 20:41:33] 2025-10-12 00:41:01,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,533 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:41:33] 2025-10-12 00:41:01,533 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,533 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:41:33] 2025-10-12 00:41:01,533 | INFO     | job 6838603121 has completed (purged errors)
[2025-10-11 20:41:33] 2025-10-12 00:41:01,533 | INFO     | overall cleanup function is called
[2025-10-11 20:41:33] 2025-10-12 00:41:02,540 | INFO     | --- collectZombieJob: --- 10, [661226]
[2025-10-11 20:41:33] 2025-10-12 00:41:02,540 | INFO     | zombie collector waiting for pid 661226
[2025-10-11 20:41:33] 2025-10-12 00:41:02,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:41:33] 2025-10-12 00:41:02,540 | INFO     | collected zombie processes
[2025-10-11 20:41:33] 2025-10-12 00:41:02,540 | INFO     | will attempt to kill all subprocesses of pid=661226
[2025-10-11 20:41:33] 2025-10-12 00:41:02,677 | INFO     | process IDs to be killed: [661226] (in reverse order)
[2025-10-11 20:41:33] 2025-10-12 00:41:02,730 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:41:33] 2025-10-12 00:41:02,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:41:33] 2025-10-12 00:41:02,734 | INFO     | did not find any defunct processes belonging to 661226
[2025-10-11 20:41:33] 2025-10-12 00:41:02,738 | INFO     | did not find any defunct processes belonging to 661226
[2025-10-11 20:41:33] 2025-10-12 00:41:02,738 | INFO     | ready for new job
[2025-10-11 20:41:33] 2025-10-12 00:41:02,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:41:33] 2025-10-12 00:41:02,739 | INFO     | ***************************************
[2025-10-11 20:41:33] 2025-10-12 00:41:02,739 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:41:33] 2025-10-12 00:41:02,739 | INFO     | ***************************************
[2025-10-11 20:41:33] 2025-10-12 00:41:02,740 | INFO     | 
[2025-10-11 20:41:33] 2025-10-12 00:41:02,758 | INFO     | architecture information:
[2025-10-11 20:41:33] 2025-10-12 00:41:02,758 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:41:33] 2025-10-12 00:41:02,770 | INFO     | cat /etc/os-release:
[2025-10-11 20:41:33] NAME="CentOS Linux"
[2025-10-11 20:41:33] VERSION="7 (Core)"
[2025-10-11 20:41:33] ID="centos"
[2025-10-11 20:41:33] ID_LIKE="rhel fedora"
[2025-10-11 20:41:33] VERSION_ID="7"
[2025-10-11 20:41:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:41:33] ANSI_COLOR="0;31"
[2025-10-11 20:41:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:41:33] HOME_URL="https://www.centos.org/"
[2025-10-11 20:41:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:41:33] 
[2025-10-11 20:41:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:41:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:41:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:41:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:41:33] 
[2025-10-11 20:41:33] 2025-10-12 00:41:02,770 | INFO     | ***************************************
[2025-10-11 20:41:33] 2025-10-12 00:41:03,272 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-11 20:41:33] 2025-10-12 00:41:03,286 | INFO     | sufficient remaining disk space (396824150016 B)
[2025-10-11 20:41:33] 2025-10-12 00:41:03,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:41:33] 2025-10-12 00:41:03,287 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:41:33] 2025-10-12 00:41:03,287 | INFO     | update_server=False
[2025-10-11 20:41:33] 2025-10-12 00:41:03,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:41:33] 2025-10-12 00:41:03,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:41:33] 2025-10-12 00:41:03,691 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 20:41:33] 2025-10-12 00:41:03,691 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 20:41:33] 2025-10-12 00:41:03,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:41:33] 2025-10-12 00:41:03,691 | INFO     | will abort loop
[2025-10-11 20:41:33] 2025-10-12 00:41:03,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:41:33] 2025-10-12 00:41:03,836 | INFO     | all data control threads have been joined
[2025-10-11 20:41:33] 2025-10-12 00:41:03,892 | INFO     | all job control threads have been joined
[2025-10-11 20:41:33] 2025-10-12 00:41:04,292 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:04,293 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:04,332 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:04,368 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:04,448 | INFO     | all payload control threads have been joined
[2025-10-11 20:41:33] 2025-10-12 00:41:04,696 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:04,700 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:41:33] 2025-10-12 00:41:04,840 | INFO     | [data] control thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:04,896 | INFO     | [job] control thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:05,088 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:05,384 | INFO     | [job] validate thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:05,452 | INFO     | [payload] control thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:05,640 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:05,720 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:05,732 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:05,740 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:08,711 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:08,872 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:41:33] 2025-10-12 00:41:13,688 | INFO     | job.realtimelogging is not enabled
[2025-10-11 20:41:33] 2025-10-12 00:41:14,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:41:33] 2025-10-12 00:41:16,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140195396695872)>', '<ExcThread(monitor, started 140194812507904)>']
[2025-10-11 20:41:33] 2025-10-12 00:41:21,427 | INFO     | all workflow threads have been joined
[2025-10-11 20:41:33] 2025-10-12 00:41:21,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:41:33] 2025-10-12 00:41:21,427 | INFO     | traces error code: 0
[2025-10-11 20:41:33] 2025-10-12 00:41:21,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:41:33] 2025-10-12 00:41:33,579 | INFO     | PID=654579 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 20:41:33] 2025-10-12 00:41:33,579 | INFO     | .. there are 8 such processes running
[2025-10-11 20:41:33] 2025-10-12 00:41:33,580 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:41:33] 2025-10-12 00:41:33,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:41:33] 2025-10-12 00:41:33,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:41:33] 2025-10-12 00:41:33,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:41:33] 2025-10-12 00:41:33,580 | INFO     | [monitor] control thread has ended
[2025-10-11 20:41:33] 2025-10-12 00:41:33,668 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:41:33] 2025-10-12 00:41:33,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:41:33] 2025-10-12 00:41:33,672 [wrapper] pilotpid: 654579
[2025-10-11 20:41:33] 2025-10-12 00:41:33,674 [wrapper] Pilot exit status: 0
[2025-10-11 20:41:33] 2025-10-12 00:41:33,682 [wrapper] pandaids: 6838603121
[2025-10-11 20:41:33] 2025-10-12 00:41:33,717 [wrapper] cleanup supervisor_pilot  853139 654580
[2025-10-11 20:41:33] 2025-10-12 00:41:33,719 [wrapper] Test setup, not cleaning
[2025-10-11 20:41:33] 2025-10-12 00:41:33,721 [wrapper] apfmon messages muted
[2025-10-11 20:41:33] 2025-10-12 00:41:33,723 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:41:33] 2025-10-12 00:41:33,726 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:41:33]  *** Error codes and diagnostics ***
[2025-10-11 20:41:33]     "exeErrorCode": 0,
[2025-10-11 20:41:33]     "exeErrorDiag": "",
[2025-10-11 20:41:33]     "pilotErrorCode": 0,
[2025-10-11 20:41:33]     "pilotErrorDiag": "",
[2025-10-11 20:41:33]  *** Listing of results directory ***
[2025-10-11 20:41:33] total 409732
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc      5112 Oct 11 11:05 queuedata.json
[2025-10-11 20:41:33] -rwx------ 1 boinc boinc     36292 Oct 11 11:05 runpilot2-wrapper.sh
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc    557409 Oct 11 11:05 pilot3.tar.gz
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc       100 Oct 11 18:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:41:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 18:44 run_atlas
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc       105 Oct 11 18:44 job.xml
[2025-10-11 20:41:33] -rw-r--r-- 2 boinc boinc 224107951 Oct 11 18:44 EVNT.46676267._002388.pool.root.1
[2025-10-11 20:41:33] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:44 start_atlas.sh
[2025-10-11 20:41:33] drwxrwx--x 2 boinc boinc      4096 Oct 11 18:44 shared
[2025-10-11 20:41:33] -rw-r--r-- 2 boinc boinc    569677 Oct 11 18:44 input.tar.gz
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc      9157 Oct 11 18:44 init_data.xml
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:44 boinc_setup_complete
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:44 boinc_lockfile
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc      2550 Oct 11 18:44 pandaJob.out
[2025-10-11 20:41:33] -rw------- 1 boinc boinc    975520 Oct 11 18:44 agis_schedconf.cvmfs.json
[2025-10-11 20:41:33] -rw------- 1 boinc boinc   1560580 Oct 11 18:44 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:41:33] drwx------ 5 boinc boinc      4096 Oct 11 18:44 pilot3
[2025-10-11 20:41:33] -rw------- 1 boinc boinc 188965155 Oct 11 20:40 HITS.46676269._059878.pool.root.1
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc       530 Oct 11 20:40 boinc_task_state.xml
[2025-10-11 20:41:33] -rw------- 1 boinc boinc        95 Oct 11 20:40 pilot_heartbeat.json
[2025-10-11 20:41:33] -rw------- 1 boinc boinc      1025 Oct 11 20:40 memory_monitor_summary.json
[2025-10-11 20:41:33] -rw------- 1 boinc boinc    284443 Oct 11 20:40 log.46676269._059878.job.log.tgz.1
[2025-10-11 20:41:33] -rw------- 1 boinc boinc      7748 Oct 11 20:41 heartbeat.json
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc      8192 Oct 11 20:41 boinc_mmap_file
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc        27 Oct 11 20:41 wrapper_checkpoint.txt
[2025-10-11 20:41:33] -rw------- 1 boinc boinc       821 Oct 11 20:41 pilotlog.txt
[2025-10-11 20:41:33] -rw------- 1 boinc boinc   1008811 Oct 11 20:41 log.46676269._059878.job.log.1
[2025-10-11 20:41:33] -rw------- 1 boinc boinc       357 Oct 11 20:41 output.list
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc       620 Oct 11 20:41 runtime_log
[2025-10-11 20:41:33] -rw------- 1 boinc boinc   1310720 Oct 11 20:41 result.tar.gz
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc      8764 Oct 11 20:41 runtime_log.err
[2025-10-11 20:41:33] -rw------- 1 boinc boinc       644 Oct 11 20:41 2hULDm2KqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmf7RMDmIgEQcm.diag
[2025-10-11 20:41:33] -rw-r--r-- 1 boinc boinc     21132 Oct 11 20:41 stderr.txt
[2025-10-11 20:41:33] HITS file was successfully produced:
[2025-10-11 20:41:33] -rw------- 1 boinc boinc 188965155 Oct 11 20:40 shared/HITS.pool.root.1
[2025-10-11 20:41:33]  *** Contents of shared directory: ***
[2025-10-11 20:41:33] total 405260
[2025-10-11 20:41:33] -rw-r--r-- 2 boinc boinc 224107951 Oct 11 18:44 ATLAS.root_0
[2025-10-11 20:41:33] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:44 start_atlas.sh
[2025-10-11 20:41:33] -rw-r--r-- 2 boinc boinc    569677 Oct 11 18:44 input.tar.gz
[2025-10-11 20:41:33] -rw------- 1 boinc boinc 188965155 Oct 11 20:40 HITS.pool.root.1
[2025-10-11 20:41:33] -rw------- 1 boinc boinc   1310720 Oct 11 20:41 result.tar.gz
20:41:34 (650743): run_atlas exited; CPU time 26918.527638
20:41:34 (650743): called boinc_finish(0)

</stderr_txt>
]]>

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