Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:33:51 (3792): wrapper (7.7.26015): starting
16:33:51 (3792): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:33:51] Arguments: --nthreads 8
[2025-10-11 16:33:51] Threads: 8
[2025-10-11 16:33:51] Checking for CVMFS
[2025-10-11 16:33:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:33:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:33:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:33:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:33:52] 2.11.2.0 21766 51944 131300 151595 2 188 13625955 18432001 1833 130560 0 46359403 99.975 2225706 25687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 16:33:52] CVMFS is ok
[2025-10-11 16:33:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:33:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:33:52] Further information can be found at the LHC@home message board.
[2025-10-11 16:33:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:33:52] Checking for apptainer binary...
[2025-10-11 16:33:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:33:52] Running /usr/bin/apptainer --version
[2025-10-11 16:33:52] apptainer version 1.3.2-1.el7
[2025-10-11 16:33:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:33:52] c-206-18.aglt2.org
[2025-10-11 16:33:52] apptainer works
[2025-10-11 16:33:52] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:33:52] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:33:52] Starting ATLAS job with PandaID=6838365063
[2025-10-11 16:33:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:39:26]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:39:26] 2025-10-11 23:38:45,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:39:26] 2025-10-11 23:38:45,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:39:26] 2025-10-11 23:38:45,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:39:26] 2025-10-11 23:38:45,973 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:39:26] 2025-10-11 23:38:45,973 | INFO     | sum of square deviations: 1869302025.5
[2025-10-11 19:39:26] 2025-10-11 23:38:45,975 | INFO     | sum of deviations: 7179911273.5
[2025-10-11 19:39:26] 2025-10-11 23:38:45,975 | INFO     | mean x: 1760220388.5
[2025-10-11 19:39:26] 2025-10-11 23:38:45,975 | INFO     | mean y: 2465769.895604396
[2025-10-11 19:39:26] 2025-10-11 23:38:45,975 | INFO     | -- intersect: -6758467476.220808
[2025-10-11 19:39:26] 2025-10-11 23:38:45,976 | INFO     | intersect: -6758467476.220808
[2025-10-11 19:39:26] 2025-10-11 23:38:45,976 | INFO     | chi2: 2.306871596921031
[2025-10-11 19:39:26] 2025-10-11 23:38:45,977 | INFO     | sum of square deviations: 1719429448.0
[2025-10-11 19:39:26] 2025-10-11 23:38:45,978 | INFO     | sum of deviations: 19194814490.000008
[2025-10-11 19:39:26] 2025-10-11 23:38:45,978 | INFO     | mean x: 1760220236.0
[2025-10-11 19:39:26] 2025-10-11 23:38:45,978 | INFO     | mean y: 2477716.97740113
[2025-10-11 19:39:26] 2025-10-11 23:38:45,979 | INFO     | -- intersect: -19647703877.192917
[2025-10-11 19:39:26] 2025-10-11 23:38:45,979 | INFO     | intersect: -19647703877.192917
[2025-10-11 19:39:26] 2025-10-11 23:38:45,979 | INFO     | chi2: 1.4933380534933978
[2025-10-11 19:39:26] 2025-10-11 23:38:45,979 | INFO     | current chi2=1.4933380534933978 (change=35.26566214233389 %)
[2025-10-11 19:39:26] 2025-10-11 23:38:45,980 | INFO     | sum of square deviations: 1577789583.0
[2025-10-11 19:39:26] 2025-10-11 23:38:45,981 | INFO     | sum of deviations: 18677321630.5
[2025-10-11 19:39:26] 2025-10-11 23:38:45,981 | INFO     | mean x: 1760220083.5
[2025-10-11 19:39:26] 2025-10-11 23:38:45,981 | INFO     | mean y: 2477159.5290697673
[2025-10-11 19:39:26] 2025-10-11 23:38:45,982 | INFO     | -- intersect: -20834392974.62688
[2025-10-11 19:39:26] 2025-10-11 23:38:45,982 | INFO     | intersect: -20834392974.62688
[2025-10-11 19:39:26] 2025-10-11 23:38:45,982 | INFO     | chi2: 1.4945734312254155
[2025-10-11 19:39:26] 2025-10-11 23:38:45,982 | INFO     | current chi2=1.4945734312254155 (change=-0.08272592593002073 %)
[2025-10-11 19:39:26] 2025-10-11 23:38:45,983 | INFO     | right removable region: 171
[2025-10-11 19:39:26] 2025-10-11 23:38:45,983 | INFO     | sum of square deviations: 1719429448.0
[2025-10-11 19:39:26] 2025-10-11 23:38:45,984 | INFO     | sum of deviations: -20711317617.0
[2025-10-11 19:39:26] 2025-10-11 23:38:45,985 | INFO     | mean x: 1760220541.0
[2025-10-11 19:39:26] 2025-10-11 23:38:45,985 | INFO     | mean y: 2493824.9322033897
[2025-10-11 19:39:26] 2025-10-11 23:38:45,985 | INFO     | -- intersect: 21205158896.781418
[2025-10-11 19:39:26] 2025-10-11 23:38:45,985 | INFO     | intersect: 21205158896.781418
[2025-10-11 19:39:26] 2025-10-11 23:38:45,986 | INFO     | chi2: 0.9013080581876327
[2025-10-11 19:39:26] 2025-10-11 23:38:45,986 | INFO     | current chi2=0.9013080581876327 (change=60.92942236617748 %)
[2025-10-11 19:39:26] 2025-10-11 23:38:45,986 | INFO     | sum of square deviations: 1577789583.0
[2025-10-11 19:39:26] 2025-10-11 23:38:45,988 | INFO     | sum of deviations: -24133610529.5
[2025-10-11 19:39:26] 2025-10-11 23:38:45,988 | INFO     | mean x: 1760220693.5
[2025-10-11 19:39:26] 2025-10-11 23:38:45,988 | INFO     | mean y: 2497454.7965116277
[2025-10-11 19:39:26] 2025-10-11 23:38:45,988 | INFO     | -- intersect: 26926544311.617085
[2025-10-11 19:39:26] 2025-10-11 23:38:45,988 | INFO     | intersect: 26926544311.617085
[2025-10-11 19:39:26] 2025-10-11 23:38:45,989 | INFO     | chi2: 0.8639371356033629
[2025-10-11 19:39:26] 2025-10-11 23:38:45,989 | INFO     | current chi2=0.8639371356033629 (change=4.146298509681133 %)
[2025-10-11 19:39:26] 2025-10-11 23:38:45,989 | INFO     | left removable region: 20
[2025-10-11 19:39:26] 2025-10-11 23:38:45,990 | INFO     | sum of square deviations: 1067554900.0
[2025-10-11 19:39:26] 2025-10-11 23:38:45,991 | INFO     | sum of deviations: -7759930780.000001
[2025-10-11 19:39:26] 2025-10-11 23:38:45,991 | INFO     | mean x: 1760220663.0
[2025-10-11 19:39:26] 2025-10-11 23:38:45,991 | INFO     | mean y: 2506487.7549668876
[2025-10-11 19:39:26] 2025-10-11 23:38:45,991 | INFO     | -- intersect: 12797343083.42392
[2025-10-11 19:39:26] 2025-10-11 23:38:45,991 | INFO     | intersect: 12797343083.42392
[2025-10-11 19:39:26] 2025-10-11 23:38:45,992 | INFO     | chi2: 0.02107254404266276
[2025-10-11 19:39:26] 2025-10-11 23:38:45,992 | INFO     | -- intersect: 12797343083.42392
[2025-10-11 19:39:26] 2025-10-11 23:38:45,992 | INFO     | current memory leak: -7.27 B/s (using 151 data points, chi2=0.02)
[2025-10-11 19:39:26] 2025-10-11 23:38:45,993 | INFO     | could have reported an average CPU frequency of 2511 MHz (10 samples)
[2025-10-11 19:39:26] 2025-10-11 23:38:45,993 | INFO     | ..............................
[2025-10-11 19:39:26] 2025-10-11 23:38:45,993 | INFO     | . Timing measurements:
[2025-10-11 19:39:26] 2025-10-11 23:38:45,993 | INFO     | . get job = 0 s
[2025-10-11 19:39:26] 2025-10-11 23:38:45,994 | INFO     | . initial setup = 2 s
[2025-10-11 19:39:26] 2025-10-11 23:38:45,994 | INFO     | . payload setup = 4 s
[2025-10-11 19:39:26] 2025-10-11 23:38:45,994 | INFO     | . stage-in = 0 s
[2025-10-11 19:39:26] 2025-10-11 23:38:45,994 | INFO     | . payload execution = 11050 s
[2025-10-11 19:39:26] 2025-10-11 23:38:45,994 | INFO     | . stage-out = 2 s
[2025-10-11 19:39:26] 2025-10-11 23:38:45,994 | INFO     | . log creation = 0 s
[2025-10-11 19:39:26] 2025-10-11 23:38:45,995 | INFO     | ..............................
[2025-10-11 19:39:26] 2025-10-11 23:38:46,157 | INFO     | 
[2025-10-11 19:39:26] 2025-10-11 23:38:46,157 | INFO     | job summary report
[2025-10-11 19:39:26] 2025-10-11 23:38:46,157 | INFO     | --------------------------------------------------
[2025-10-11 19:39:26] 2025-10-11 23:38:46,157 | INFO     | PanDA job id: 6838365063
[2025-10-11 19:39:26] 2025-10-11 23:38:46,157 | INFO     | task id: 46676269
[2025-10-11 19:39:26] 2025-10-11 23:38:46,158 | INFO     | errors: (none)
[2025-10-11 19:39:26] 2025-10-11 23:38:46,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:39:26] 2025-10-11 23:38:46,158 | INFO     | pilot state: finished 
[2025-10-11 19:39:26] 2025-10-11 23:38:46,158 | INFO     | transexitcode: 0
[2025-10-11 19:39:26] 2025-10-11 23:38:46,158 | INFO     | exeerrorcode: 0
[2025-10-11 19:39:26] 2025-10-11 23:38:46,158 | INFO     | exeerrordiag: 
[2025-10-11 19:39:26] 2025-10-11 23:38:46,159 | INFO     | exitcode: 0
[2025-10-11 19:39:26] 2025-10-11 23:38:46,159 | INFO     | exitmsg: OK
[2025-10-11 19:39:26] 2025-10-11 23:38:46,159 | INFO     | cpuconsumptiontime: 83420 s
[2025-10-11 19:39:26] 2025-10-11 23:38:46,159 | INFO     | nevents: 400
[2025-10-11 19:39:26] 2025-10-11 23:38:46,159 | INFO     | neventsw: 0
[2025-10-11 19:39:26] 2025-10-11 23:38:46,159 | INFO     | pid: 14030
[2025-10-11 19:39:26] 2025-10-11 23:38:46,160 | INFO     | pgrp: 14030
[2025-10-11 19:39:26] 2025-10-11 23:38:46,160 | INFO     | corecount: 8
[2025-10-11 19:39:26] 2025-10-11 23:38:46,160 | INFO     | event service: False
[2025-10-11 19:39:26] 2025-10-11 23:38:46,160 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 11059: 2378449, 11062: 2387447, 11063: 2387631, 11067: 2387825}
[2025-10-11 19:39:26] 2025-10-11 23:38:46,160 | INFO     | --------------------------------------------------
[2025-10-11 19:39:26] 2025-10-11 23:38:46,160 | INFO     | 
[2025-10-11 19:39:26] 2025-10-11 23:38:46,161 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 19:39:26] 2025-10-11 23:38:46,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,184 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,184 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:39:26] 2025-10-11 23:38:46,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:39:26] 2025-10-11 23:38:46,186 | INFO     | job 6838365063 has completed (purged errors)
[2025-10-11 19:39:26] 2025-10-11 23:38:46,186 | INFO     | overall cleanup function is called
[2025-10-11 19:39:26] 2025-10-11 23:38:47,195 | INFO     | --- collectZombieJob: --- 10, [14030]
[2025-10-11 19:39:26] 2025-10-11 23:38:47,202 | INFO     | zombie collector waiting for pid 14030
[2025-10-11 19:39:26] 2025-10-11 23:38:47,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:39:26] 2025-10-11 23:38:47,202 | INFO     | collected zombie processes
[2025-10-11 19:39:26] 2025-10-11 23:38:47,202 | INFO     | will attempt to kill all subprocesses of pid=14030
[2025-10-11 19:39:26] 2025-10-11 23:38:47,363 | INFO     | process IDs to be killed: [14030] (in reverse order)
[2025-10-11 19:39:26] 2025-10-11 23:38:47,420 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:39:26] 2025-10-11 23:38:47,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:39:26] 2025-10-11 23:38:47,427 | INFO     | did not find any defunct processes belonging to 14030
[2025-10-11 19:39:26] 2025-10-11 23:38:47,432 | INFO     | did not find any defunct processes belonging to 14030
[2025-10-11 19:39:26] 2025-10-11 23:38:47,432 | INFO     | ready for new job
[2025-10-11 19:39:26] 2025-10-11 23:38:47,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:39:26] 2025-10-11 23:38:47,434 | INFO     | ***************************************
[2025-10-11 19:39:26] 2025-10-11 23:38:47,434 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:39:26] 2025-10-11 23:38:47,435 | INFO     | ***************************************
[2025-10-11 19:39:26] 2025-10-11 23:38:47,435 | INFO     | 
[2025-10-11 19:39:26] 2025-10-11 23:38:47,436 | INFO     | architecture information:
[2025-10-11 19:39:26] 2025-10-11 23:38:47,436 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:39:26] 2025-10-11 23:38:47,450 | INFO     | cat /etc/os-release:
[2025-10-11 19:39:26] NAME="CentOS Linux"
[2025-10-11 19:39:26] VERSION="7 (Core)"
[2025-10-11 19:39:26] ID="centos"
[2025-10-11 19:39:26] ID_LIKE="rhel fedora"
[2025-10-11 19:39:26] VERSION_ID="7"
[2025-10-11 19:39:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:39:26] ANSI_COLOR="0;31"
[2025-10-11 19:39:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:39:26] HOME_URL="https://www.centos.org/"
[2025-10-11 19:39:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:39:26] 
[2025-10-11 19:39:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:39:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:39:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:39:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:39:26] 
[2025-10-11 19:39:26] 2025-10-11 23:38:47,451 | INFO     | ***************************************
[2025-10-11 19:39:26] 2025-10-11 23:38:47,954 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 19:39:26] 2025-10-11 23:38:47,970 | INFO     | sufficient remaining disk space (28391243776 B)
[2025-10-11 19:39:26] 2025-10-11 23:38:47,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:39:26] 2025-10-11 23:38:47,971 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:39:26] 2025-10-11 23:38:47,971 | INFO     | update_server=False
[2025-10-11 19:39:26] 2025-10-11 23:38:47,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:39:26] 2025-10-11 23:38:47,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:39:26] 2025-10-11 23:38:47,972 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:39:26] 2025-10-11 23:38:47,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:39:26] 2025-10-11 23:38:47,972 | INFO     | aborting loop
[2025-10-11 19:39:26] 2025-10-11 23:38:48,072 | INFO     | all data control threads have been joined
[2025-10-11 19:39:26] 2025-10-11 23:38:48,428 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:39:26] 2025-10-11 23:38:48,622 | INFO     | all payload control threads have been joined
[2025-10-11 19:39:26] 2025-10-11 23:38:48,977 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:48,977 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:48,978 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:49,077 | INFO     | [data] control thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:49,112 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:49,417 | INFO     | all job control threads have been joined
[2025-10-11 19:39:26] 2025-10-11 23:38:49,433 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:49,629 | INFO     | [payload] control thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:49,833 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:49,836 | INFO     | [job] validate thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:49,841 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:50,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:50,294 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:50,368 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:50,422 | INFO     | [job] control thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:50,431 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:38:51,979 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:39:26] 2025-10-11 23:39:19,087 | INFO     | PID=7478 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 19:39:26] 2025-10-11 23:39:19,087 | INFO     | .. there are 3 such processes running
[2025-10-11 19:39:26] 2025-10-11 23:39:19,088 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:39:26] 2025-10-11 23:39:19,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:39:26] 2025-10-11 23:39:19,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:39:26] 2025-10-11 23:39:20,525 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:39:26] 2025-10-11 23:39:21,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840522315584)>', '<ExcThread(monitor, started 139839949227776)>']
[2025-10-11 19:39:26] 2025-10-11 23:39:22,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:39:26] 2025-10-11 23:39:22,103 | INFO     | [monitor] control thread has ended
[2025-10-11 19:39:26] 2025-10-11 23:39:26,545 | INFO     | all workflow threads have been joined
[2025-10-11 19:39:26] 2025-10-11 23:39:26,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:39:26] 2025-10-11 23:39:26,545 | INFO     | traces error code: 0
[2025-10-11 19:39:26] 2025-10-11 23:39:26,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:39:26] 2025-10-11 23:39:26,672 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:39:26] 2025-10-11 23:39:26,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:39:26] 2025-10-11 23:39:26,677 [wrapper] pilotpid: 7478
[2025-10-11 19:39:26] 2025-10-11 23:39:26,679 [wrapper] Pilot exit status: 0
[2025-10-11 19:39:26] 2025-10-11 23:39:26,689 [wrapper] pandaids: 6838365063
[2025-10-11 19:39:26] 2025-10-11 23:39:26,727 [wrapper] cleanup supervisor_pilot 11089 7479
[2025-10-11 19:39:26] 2025-10-11 23:39:26,729 [wrapper] Test setup, not cleaning
[2025-10-11 19:39:26] 2025-10-11 23:39:26,732 [wrapper] apfmon messages muted
[2025-10-11 19:39:26] 2025-10-11 23:39:26,734 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:39:26] 2025-10-11 23:39:26,736 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:39:26]  *** Error codes and diagnostics ***
[2025-10-11 19:39:26]     "exeErrorCode": 0,
[2025-10-11 19:39:26]     "exeErrorDiag": "",
[2025-10-11 19:39:26]     "pilotErrorCode": 0,
[2025-10-11 19:39:26]     "pilotErrorDiag": "",
[2025-10-11 19:39:26]  *** Listing of results directory ***
[2025-10-11 19:39:26] total 417992
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 07:04 pilot3.tar.gz
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 07:18 queuedata.json
[2025-10-11 19:39:26] -rwx------ 1 boincer umatlas     36292 Oct 11 07:19 runpilot2-wrapper.sh
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas       100 Oct 11 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:39:26] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 16:33 run_atlas
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas       105 Oct 11 16:33 job.xml
[2025-10-11 19:39:26] -rw-r--r-- 2 boincer umatlas 223132266 Oct 11 16:33 EVNT.46676267._002268.pool.root.1
[2025-10-11 19:39:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:33 start_atlas.sh
[2025-10-11 19:39:26] drwxrwx--x 2 boincer umatlas      4096 Oct 11 16:33 shared
[2025-10-11 19:39:26] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 16:33 input.tar.gz
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas         0 Oct 11 16:33 boinc_lockfile
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 16:33 pandaJob.out
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas    975528 Oct 11 16:34 agis_schedconf.cvmfs.json
[2025-10-11 19:39:26] drwx------ 5 boincer umatlas      4096 Oct 11 16:34 pilot3
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas      5953 Oct 11 19:37 init_data.xml
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas 197016620 Oct 11 19:38 HITS.46676269._056595.pool.root.1
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas       530 Oct 11 19:38 boinc_task_state.xml
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas      1053 Oct 11 19:38 memory_monitor_summary.json
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas   1560580 Oct 11 19:38 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas    422335 Oct 11 19:38 log.46676269._056595.job.log.tgz.1
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas      7862 Oct 11 19:38 heartbeat.json
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 19:38 boinc_mmap_file
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas        28 Oct 11 19:38 wrapper_checkpoint.txt
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas        95 Oct 11 19:39 pilot_heartbeat.json
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas      4820 Oct 11 19:39 pilotlog.txt
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas   1562107 Oct 11 19:39 log.46676269._056595.job.log.1
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas       357 Oct 11 19:39 output.list
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas       620 Oct 11 19:39 runtime_log
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas   2007040 Oct 11 19:39 result.tar.gz
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 19:39 runtime_log.err
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas       661 Oct 11 19:39 OxRNDmznmR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSkRMDmXZtmem.diag
[2025-10-11 19:39:26] -rw-r--r-- 1 boincer umatlas     20866 Oct 11 19:39 stderr.txt
[2025-10-11 19:39:26] HITS file was successfully produced:
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas 197016620 Oct 11 19:38 shared/HITS.pool.root.1
[2025-10-11 19:39:26]  *** Contents of shared directory: ***
[2025-10-11 19:39:26] total 412844
[2025-10-11 19:39:26] -rw-r--r-- 2 boincer umatlas 223132266 Oct 11 16:33 ATLAS.root_0
[2025-10-11 19:39:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:33 start_atlas.sh
[2025-10-11 19:39:26] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 16:33 input.tar.gz
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas 197016620 Oct 11 19:38 HITS.pool.root.1
[2025-10-11 19:39:26] -rw------- 1 boincer umatlas   2007040 Oct 11 19:39 result.tar.gz
19:39:28 (3792): run_atlas exited; CPU time 83554.859969
19:39:28 (3792): called boinc_finish(0)

</stderr_txt>
]]>

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