Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:00:37 (2507332): wrapper (7.7.26015): starting
13:00:37 (2507332): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 13:00:37] Arguments: --nthreads 3
[2025-10-12 13:00:37] Threads: 3
[2025-10-12 13:00:37] Checking for CVMFS
[2025-10-12 13:00:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:00:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:00:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:00:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:00:37] 2.9.2.0 1204004 4154 81968 151617 1 57 4259929 36864000 0 130560 0 3218344 99.990 141538 722 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 13:00:37] CVMFS is ok
[2025-10-12 13:00:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:00:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:00:37] Further information can be found at the LHC@home message board.
[2025-10-12 13:00:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:00:37] Checking for apptainer binary...
[2025-10-12 13:00:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:00:37] Running /usr/bin/apptainer --version
[2025-10-12 13:00:37] apptainer version 1.4.1-1.1
[2025-10-12 13:00:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:00:37] thA312
[2025-10-12 13:00:37] apptainer works
[2025-10-12 13:00:37] Set ATHENA_PROC_NUMBER=3
[2025-10-12 13:00:37] Set ATHENA_CORE_NUMBER=3
[2025-10-12 13:00:37] Starting ATLAS job with PandaID=6838603251
[2025-10-12 13:00:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:26:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:26:54] 2025-10-12 12:26:06,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:26:54] 2025-10-12 12:26:06,743 | INFO     | aborting loop
[2025-10-12 14:26:54] 2025-10-12 12:26:06,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:26:54] 2025-10-12 12:26:06,835 | INFO     | all payload control threads have been joined
[2025-10-12 14:26:54] 2025-10-12 12:26:07,259 | INFO     | all data control threads have been joined
[2025-10-12 14:26:54] 2025-10-12 12:26:07,748 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:07,748 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:07,748 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:07,815 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:07,840 | INFO     | [payload] control thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:08,099 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:08,265 | INFO     | [data] control thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:08,331 | INFO     | [job] validate thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:08,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:08,376 | INFO     | all job control threads have been joined
[2025-10-12 14:26:54] 2025-10-12 12:26:08,403 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:08,492 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:08,625 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:08,748 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:09,031 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:09,382 | INFO     | [job] control thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:10,777 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:26:54] 2025-10-12 12:26:36,318 | INFO     | PID=2511043 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:26:54] 2025-10-12 12:26:36,318 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:26:54] 2025-10-12 12:26:36,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:26:54] 2025-10-12 12:26:36,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:26:54] 2025-10-12 12:26:48,463 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:26:54] 2025-10-12 12:26:49,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131762493248)>', '<ExcThread(monitor, started 140131277199104)>']
[2025-10-12 14:26:54] 2025-10-12 12:26:50,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:26:54] 2025-10-12 12:26:50,383 | INFO     | [monitor] control thread has ended
[2025-10-12 14:26:54] 2025-10-12 12:26:54,843 | INFO     | all workflow threads have been joined
[2025-10-12 14:26:54] 2025-10-12 12:26:54,843 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:26:54] 2025-10-12 12:26:54,843 | INFO     | traces error code: 0
[2025-10-12 14:26:54] 2025-10-12 12:26:54,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:26:54] 2025-10-12 12:26:54,895 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:26:54] 2025-10-12 12:26:54,898 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:26:54] 2025-10-12 12:26:54,900 [wrapper] pilotpid: 2511043
[2025-10-12 14:26:54] 2025-10-12 12:26:54,902 [wrapper] Pilot exit status: 0
[2025-10-12 14:26:54] 2025-10-12 12:26:54,909 [wrapper] pandaids: 6838603251
[2025-10-12 14:26:54] 2025-10-12 12:26:54,927 [wrapper] cleanup supervisor_pilot 2530123 2511044
[2025-10-12 14:26:54] 2025-10-12 12:26:54,929 [wrapper] Test setup, not cleaning
[2025-10-12 14:26:54] 2025-10-12 12:26:54,932 [wrapper] apfmon messages muted
[2025-10-12 14:26:54] 2025-10-12 12:26:54,934 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:26:54] 2025-10-12 12:26:54,936 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:26:54]  *** Error codes and diagnostics ***
[2025-10-12 14:26:54]     "exeErrorCode": 0,
[2025-10-12 14:26:54]     "exeErrorDiag": "",
[2025-10-12 14:26:54]     "pilotErrorCode": 0,
[2025-10-12 14:26:54]     "pilotErrorDiag": "",
[2025-10-12 14:26:54]  *** Listing of results directory ***
[2025-10-12 14:26:54] total 411756
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:05 queuedata.json
[2025-10-12 14:26:54] -rwx------ 1 boinc boinc     36292 Oct 11 17:05 runpilot2-wrapper.sh
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:05 pilot3.tar.gz
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc       100 Oct 12 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:26:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 13:00 run_atlas
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc       105 Oct 12 13:00 job.xml
[2025-10-12 14:26:54] -rw-r--r-- 2 boinc boinc 221893131 Oct 12 13:00 EVNT.46676267._002393.pool.root.1
[2025-10-12 14:26:54] -rw-r--r-- 2 boinc boinc    569675 Oct 12 13:00 input.tar.gz
[2025-10-12 14:26:54] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:00 start_atlas.sh
[2025-10-12 14:26:54] drwxrwx--x 2 boinc boinc      4096 Oct 12 13:00 shared
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:00 boinc_setup_complete
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc      6437 Oct 12 13:00 init_data.xml
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:00 boinc_lockfile
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc      2550 Oct 12 13:00 pandaJob.out
[2025-10-12 14:26:54] -rw------- 1 boinc boinc    975520 Oct 12 13:00 agis_schedconf.cvmfs.json
[2025-10-12 14:26:54] -rw------- 1 boinc boinc   1560580 Oct 12 13:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:26:54] drwx------ 5 boinc boinc      4096 Oct 12 13:00 pilot3
[2025-10-12 14:26:54] -rw------- 1 boinc boinc 193830820 Oct 12 14:25 HITS.46676269._059969.pool.root.1
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc       529 Oct 12 14:25 boinc_task_state.xml
[2025-10-12 14:26:54] -rw------- 1 boinc boinc      1022 Oct 12 14:25 memory_monitor_summary.json
[2025-10-12 14:26:54] -rw------- 1 boinc boinc    263730 Oct 12 14:26 log.46676269._059969.job.log.tgz.1
[2025-10-12 14:26:54] -rw------- 1 boinc boinc      7762 Oct 12 14:26 heartbeat.json
[2025-10-12 14:26:54] -rw------- 1 boinc boinc        95 Oct 12 14:26 pilot_heartbeat.json
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:26 boinc_mmap_file
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:26 wrapper_checkpoint.txt
[2025-10-12 14:26:54] -rw------- 1 boinc boinc      4752 Oct 12 14:26 pilotlog.txt
[2025-10-12 14:26:54] -rw------- 1 boinc boinc    749171 Oct 12 14:26 log.46676269._059969.job.log.1
[2025-10-12 14:26:54] -rw------- 1 boinc boinc       357 Oct 12 14:26 output.list
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:26 runtime_log
[2025-10-12 14:26:54] -rw------- 1 boinc boinc   1034240 Oct 12 14:26 result.tar.gz
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc      8777 Oct 12 14:26 runtime_log.err
[2025-10-12 14:26:54] -rw------- 1 boinc boinc       658 Oct 12 14:26 QBiLDm2KqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmo7RMDm0gJYyn.diag
[2025-10-12 14:26:54] -rw-r--r-- 1 boinc boinc      6937 Oct 12 14:26 stderr.txt
[2025-10-12 14:26:54] HITS file was successfully produced:
[2025-10-12 14:26:54] -rw------- 1 boinc boinc 193830820 Oct 12 14:25 shared/HITS.pool.root.1
[2025-10-12 14:26:54]  *** Contents of shared directory: ***
[2025-10-12 14:26:54] total 407576
[2025-10-12 14:26:54] -rw-r--r-- 2 boinc boinc 221893131 Oct 12 13:00 ATLAS.root_0
[2025-10-12 14:26:54] -rw-r--r-- 2 boinc boinc    569675 Oct 12 13:00 input.tar.gz
[2025-10-12 14:26:54] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:00 start_atlas.sh
[2025-10-12 14:26:54] -rw------- 1 boinc boinc 193830820 Oct 12 14:25 HITS.pool.root.1
[2025-10-12 14:26:54] -rw------- 1 boinc boinc   1034240 Oct 12 14:26 result.tar.gz
14:26:56 (2507332): run_atlas exited; CPU time 14648.053138
14:26:56 (2507332): called boinc_finish(0)

</stderr_txt>
]]>

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