Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
18:28:29 (620769): wrapper (7.7.26015): starting
18:28:29 (620769): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 18:28:29] Arguments: --nthreads 4
[2025-10-11 18:28:29] Threads: 4
[2025-10-11 18:28:29] Checking for CVMFS
[2025-10-11 18:28:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:28:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:28:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:28:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:28:29] 2.11.5.0 2691367 3555 110084 151599 3 187 2975290 4096001 6386 130560 0 17593690 99.998 122952 2774 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 18:28:29] CVMFS is ok
[2025-10-11 18:28:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:28:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 18:28:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 18:28:29] Further information can be found at the LHC@home message board.
[2025-10-11 18:28:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:28:29] Checking for apptainer binary...
[2025-10-11 18:28:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:28:29] Running /usr/bin/apptainer --version
[2025-10-11 18:28:29] apptainer version 1.4.3
[2025-10-11 18:28:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:28:29] x32-linux3
[2025-10-11 18:28:29] apptainer works
[2025-10-11 18:28:29] Set ATHENA_PROC_NUMBER=4
[2025-10-11 18:28:29] Set ATHENA_CORE_NUMBER=4
[2025-10-11 18:28:29] Starting ATLAS job with PandaID=6838604468
[2025-10-11 18:28:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:29:05]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:29:05] 2025-10-12 00:28:31,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:29:05] 2025-10-12 00:28:31,704 | INFO     | time since job start (7194s) is within the limit (172800.0s)
[2025-10-11 20:29:05] 2025-10-12 00:28:31,934 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 20:29:05] 2025-10-12 00:28:31,939 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3663.056125
[2025-10-11 20:29:05] 2025-10-12 00:28:31,944 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6838604468/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:29:05] 2025-10-12 00:28:31,944 | INFO     | extracted standard info from prmon json
[2025-10-11 20:29:05] 2025-10-12 00:28:31,944 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:29:05] 2025-10-12 00:28:31,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:29:05] 2025-10-12 00:28:31,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:29:05] 2025-10-12 00:28:31,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:29:05] 2025-10-12 00:28:31,946 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:29:05] 2025-10-12 00:28:31,946 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 20:29:05] 2025-10-12 00:28:31,947 | INFO     | sum of deviations: -4036451221.5000005
[2025-10-11 20:29:05] 2025-10-12 00:28:31,947 | INFO     | mean x: 1760225307.5
[2025-10-11 20:29:05] 2025-10-12 00:28:31,947 | INFO     | mean y: 2346575.1101694917
[2025-10-11 20:29:05] 2025-10-12 00:28:31,947 | INFO     | -- intersect: 13949151130.790627
[2025-10-11 20:29:05] 2025-10-12 00:28:31,947 | INFO     | intersect: 13949151130.790627
[2025-10-11 20:29:05] 2025-10-12 00:28:31,947 | INFO     | chi2: 1.1378615857632943
[2025-10-11 20:29:05] 2025-10-12 00:28:31,947 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 20:29:05] 2025-10-12 00:28:31,948 | INFO     | sum of deviations: -3542450926.0000005
[2025-10-11 20:29:05] 2025-10-12 00:28:31,948 | INFO     | mean x: 1760225155.0
[2025-10-11 20:29:05] 2025-10-12 00:28:31,948 | INFO     | mean y: 2347789.7522123894
[2025-10-11 20:29:05] 2025-10-12 00:28:31,948 | INFO     | -- intersect: 13940086682.900288
[2025-10-11 20:29:05] 2025-10-12 00:28:31,948 | INFO     | intersect: 13940086682.900288
[2025-10-11 20:29:05] 2025-10-12 00:28:31,948 | INFO     | chi2: 1.1378715059302127
[2025-10-11 20:29:05] 2025-10-12 00:28:31,948 | INFO     | current chi2=1.1378715059302127 (change=-0.0008718254524525511 %)
[2025-10-11 20:29:05] 2025-10-12 00:28:31,948 | INFO     | right removable region: 112
[2025-10-11 20:29:05] 2025-10-12 00:28:31,948 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 20:29:05] 2025-10-12 00:28:31,949 | INFO     | sum of deviations: -13880538471.0
[2025-10-11 20:29:05] 2025-10-12 00:28:31,949 | INFO     | mean x: 1760225460.0
[2025-10-11 20:29:05] 2025-10-12 00:28:31,949 | INFO     | mean y: 2369953.3805309734
[2025-10-11 20:29:05] 2025-10-12 00:28:31,949 | INFO     | -- intersect: 54615223728.48473
[2025-10-11 20:29:05] 2025-10-12 00:28:31,949 | INFO     | intersect: 54615223728.48473
[2025-10-11 20:29:05] 2025-10-12 00:28:31,949 | INFO     | chi2: 0.036831748021530525
[2025-10-11 20:29:05] 2025-10-12 00:28:31,949 | INFO     | current chi2=0.036831748021530525 (change=96.76307307651807 %)
[2025-10-11 20:29:05] 2025-10-12 00:28:31,949 | INFO     | sum of square deviations: 390582207.0
[2025-10-11 20:29:05] 2025-10-12 00:28:31,950 | INFO     | sum of deviations: -11807397289.999994
[2025-10-11 20:29:05] 2025-10-12 00:28:31,950 | INFO     | mean x: 1760225612.5
[2025-10-11 20:29:05] 2025-10-12 00:28:31,950 | INFO     | mean y: 2364375.462962963
[2025-10-11 20:29:05] 2025-10-12 00:28:31,950 | INFO     | -- intersect: 53214422565.35659
[2025-10-11 20:29:05] 2025-10-12 00:28:31,950 | INFO     | intersect: 53214422565.35659
[2025-10-11 20:29:05] 2025-10-12 00:28:31,950 | INFO     | chi2: 0.03636970566687507
[2025-10-11 20:29:05] 2025-10-12 00:28:31,950 | INFO     | current chi2=0.03636970566687507 (change=1.2544676250102498 %)
[2025-10-11 20:29:05] 2025-10-12 00:28:31,950 | INFO     | left removable region: 20
[2025-10-11 20:29:05] 2025-10-12 00:28:31,950 | INFO     | sum of square deviations: 241429643.0
[2025-10-11 20:29:05] 2025-10-12 00:28:31,951 | INFO     | sum of deviations: -6914964941.0
[2025-10-11 20:29:05] 2025-10-12 00:28:31,951 | INFO     | mean x: 1760225734.5
[2025-10-11 20:29:05] 2025-10-12 00:28:31,951 | INFO     | mean y: 2353186.8695652173
[2025-10-11 20:29:05] 2025-10-12 00:28:31,951 | INFO     | -- intersect: 50418280125.524216
[2025-10-11 20:29:05] 2025-10-12 00:28:31,951 | INFO     | intersect: 50418280125.524216
[2025-10-11 20:29:05] 2025-10-12 00:28:31,951 | INFO     | chi2: 0.028968798066122313
[2025-10-11 20:29:05] 2025-10-12 00:28:31,951 | INFO     | -- intersect: 50418280125.524216
[2025-10-11 20:29:05] 2025-10-12 00:28:31,951 | INFO     | current memory leak: -28.64 B/s (using 92 data points, chi2=0.03)
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | could have reported an average CPU frequency of 3784 MHz (7 samples)
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | ..............................
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | . Timing measurements:
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | . get job = 0 s
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | . initial setup = 2 s
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | . payload setup = 3 s
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | . stage-in = 0 s
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | . payload execution = 7165 s
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | . stage-out = 0 s
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | . log creation = 0 s
[2025-10-11 20:29:05] 2025-10-12 00:28:31,952 | INFO     | ..............................
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | 
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | job summary report
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | --------------------------------------------------
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | PanDA job id: 6838604468
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | task id: 46676269
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | errors: (none)
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | pilot state: finished 
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | transexitcode: 0
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | exeerrorcode: 0
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | exeerrordiag: 
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | exitcode: 0
[2025-10-11 20:29:05] 2025-10-12 00:28:32,467 | INFO     | exitmsg: OK
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | cpuconsumptiontime: 27856 s
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | nevents: 400
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | neventsw: 0
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | pid: 631263
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | pgrp: 631263
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | corecount: 4
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | event service: False
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | sizes: {0: 2348692, 1: 2348891, 4: 2349153, 11: 2349181, 7173: 2376523, 7175: 2385535, 7177: 2385719, 7180: 2385913}
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | --------------------------------------------------
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | 
[2025-10-11 20:29:05] 2025-10-12 00:28:32,468 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-11 20:29:05] 2025-10-12 00:28:32,483 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,483 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,483 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,483 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,483 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,484 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:29:05] 2025-10-12 00:28:32,485 | INFO     | job 6838604468 has completed (purged errors)
[2025-10-11 20:29:05] 2025-10-12 00:28:32,485 | INFO     | overall cleanup function is called
[2025-10-11 20:29:05] 2025-10-12 00:28:33,492 | INFO     | --- collectZombieJob: --- 10, [631263]
[2025-10-11 20:29:05] 2025-10-12 00:28:33,492 | INFO     | zombie collector waiting for pid 631263
[2025-10-11 20:29:05] 2025-10-12 00:28:33,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:29:05] 2025-10-12 00:28:33,492 | INFO     | collected zombie processes
[2025-10-11 20:29:05] 2025-10-12 00:28:33,492 | INFO     | will attempt to kill all subprocesses of pid=631263
[2025-10-11 20:29:05] 2025-10-12 00:28:33,623 | INFO     | process IDs to be killed: [631263] (in reverse order)
[2025-10-11 20:29:05] 2025-10-12 00:28:33,673 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:29:05] 2025-10-12 00:28:33,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:29:05] 2025-10-12 00:28:33,678 | INFO     | did not find any defunct processes belonging to 631263
[2025-10-11 20:29:05] 2025-10-12 00:28:33,681 | INFO     | did not find any defunct processes belonging to 631263
[2025-10-11 20:29:05] 2025-10-12 00:28:33,681 | INFO     | ready for new job
[2025-10-11 20:29:05] 2025-10-12 00:28:33,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:29:05] 2025-10-12 00:28:33,683 | INFO     | ***************************************
[2025-10-11 20:29:05] 2025-10-12 00:28:33,683 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:29:05] 2025-10-12 00:28:33,683 | INFO     | ***************************************
[2025-10-11 20:29:05] 2025-10-12 00:28:33,683 | INFO     | 
[2025-10-11 20:29:05] 2025-10-12 00:28:33,702 | INFO     | architecture information:
[2025-10-11 20:29:05] 2025-10-12 00:28:33,702 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:29:05] 2025-10-12 00:28:33,713 | INFO     | cat /etc/os-release:
[2025-10-11 20:29:05] NAME="CentOS Linux"
[2025-10-11 20:29:05] VERSION="7 (Core)"
[2025-10-11 20:29:05] ID="centos"
[2025-10-11 20:29:05] ID_LIKE="rhel fedora"
[2025-10-11 20:29:05] VERSION_ID="7"
[2025-10-11 20:29:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:29:05] ANSI_COLOR="0;31"
[2025-10-11 20:29:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:29:05] HOME_URL="https://www.centos.org/"
[2025-10-11 20:29:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:29:05] 
[2025-10-11 20:29:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:29:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:29:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:29:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:29:05] 
[2025-10-11 20:29:05] 2025-10-12 00:28:33,714 | INFO     | ***************************************
[2025-10-11 20:29:05] 2025-10-12 00:28:34,216 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-11 20:29:05] 2025-10-12 00:28:34,229 | INFO     | sufficient remaining disk space (396599754752 B)
[2025-10-11 20:29:05] 2025-10-12 00:28:34,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:29:05] 2025-10-12 00:28:34,229 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:29:05] 2025-10-12 00:28:34,229 | INFO     | update_server=False
[2025-10-11 20:29:05] 2025-10-12 00:28:34,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:29:05] 2025-10-12 00:28:34,540 | INFO     | all payload control threads have been joined
[2025-10-11 20:29:05] 2025-10-12 00:28:34,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:29:05] 2025-10-12 00:28:34,637 | INFO     | aborting loop
[2025-10-11 20:29:05] 2025-10-12 00:28:34,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:29:05] 2025-10-12 00:28:35,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:29:05] 2025-10-12 00:28:35,080 | INFO     | all data control threads have been joined
[2025-10-11 20:29:05] 2025-10-12 00:28:35,232 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:35,312 | INFO     | [job] validate thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:35,534 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:35,544 | INFO     | [payload] control thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:35,643 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:35,748 | INFO     | all job control threads have been joined
[2025-10-11 20:29:05] 2025-10-12 00:28:36,084 | INFO     | [data] control thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:36,123 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-11 20:29:05] 2025-10-12 00:28:36,357 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:36,412 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:36,428 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:36,659 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:36,709 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:36,752 | INFO     | [job] control thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:36,792 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:36,804 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:37,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:29:05] 2025-10-12 00:28:38,028 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:39,024 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:29:05] 2025-10-12 00:28:49,408 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:29:05] 2025-10-12 00:28:50,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929665722176)>', '<ExcThread(monitor, started 139928960759552)>']
[2025-10-11 20:29:05] 2025-10-12 00:28:55,261 | INFO     | all workflow threads have been joined
[2025-10-11 20:29:05] 2025-10-12 00:28:55,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:29:05] 2025-10-12 00:28:55,261 | INFO     | traces error code: 0
[2025-10-11 20:29:05] 2025-10-12 00:28:55,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:29:05] 2025-10-12 00:29:04,937 | INFO     | PID=624611 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 20:29:05] 2025-10-12 00:29:04,938 | INFO     | .. there are 7 such processes running
[2025-10-11 20:29:05] 2025-10-12 00:29:04,938 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:29:05] 2025-10-12 00:29:04,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:29:05] 2025-10-12 00:29:04,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:29:05] 2025-10-12 00:29:04,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:29:05] 2025-10-12 00:29:04,938 | INFO     | [monitor] control thread has ended
[2025-10-11 20:29:05] 2025-10-12 00:29:05,022 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:29:05] 2025-10-12 00:29:05,025 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:29:05] 2025-10-12 00:29:05,028 [wrapper] pilotpid: 624611
[2025-10-11 20:29:05] 2025-10-12 00:29:05,030 [wrapper] Pilot exit status: 0
[2025-10-11 20:29:05] 2025-10-12 00:29:05,039 [wrapper] pandaids: 6838604468
[2025-10-11 20:29:05] 2025-10-12 00:29:05,073 [wrapper] cleanup supervisor_pilot  816725 624612
[2025-10-11 20:29:05] 2025-10-12 00:29:05,075 [wrapper] Test setup, not cleaning
[2025-10-11 20:29:05] 2025-10-12 00:29:05,077 [wrapper] apfmon messages muted
[2025-10-11 20:29:05] 2025-10-12 00:29:05,079 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:29:05] 2025-10-12 00:29:05,081 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:29:05]  *** Error codes and diagnostics ***
[2025-10-11 20:29:05]     "exeErrorCode": 0,
[2025-10-11 20:29:05]     "exeErrorDiag": "",
[2025-10-11 20:29:05]     "pilotErrorCode": 0,
[2025-10-11 20:29:05]     "pilotErrorDiag": "",
[2025-10-11 20:29:05]  *** Listing of results directory ***
[2025-10-11 20:29:05] total 407380
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc    557409 Oct 11 11:21 pilot3.tar.gz
[2025-10-11 20:29:05] -rwx------ 1 boinc boinc     36292 Oct 11 11:34 runpilot2-wrapper.sh
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc      5112 Oct 11 11:34 queuedata.json
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc       100 Oct 11 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:29:05] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 18:28 run_atlas
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc       105 Oct 11 18:28 job.xml
[2025-10-11 20:29:05] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:28 start_atlas.sh
[2025-10-11 20:29:05] drwxrwx--x 2 boinc boinc      4096 Oct 11 18:28 shared
[2025-10-11 20:29:05] -rw-r--r-- 2 boinc boinc    569674 Oct 11 18:28 input.tar.gz
[2025-10-11 20:29:05] -rw-r--r-- 2 boinc boinc 222598607 Oct 11 18:28 EVNT.46676267._002419.pool.root.1
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc      9157 Oct 11 18:28 init_data.xml
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:28 boinc_setup_complete
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:28 boinc_lockfile
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc      2549 Oct 11 18:28 pandaJob.out
[2025-10-11 20:29:05] -rw------- 1 boinc boinc    975520 Oct 11 18:28 agis_schedconf.cvmfs.json
[2025-10-11 20:29:05] -rw------- 1 boinc boinc   1560580 Oct 11 18:28 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:29:05] drwx------ 5 boinc boinc      4096 Oct 11 18:28 pilot3
[2025-10-11 20:29:05] -rw------- 1 boinc boinc 187952978 Oct 11 20:28 HITS.46676269._060243.pool.root.1
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc       529 Oct 11 20:28 boinc_task_state.xml
[2025-10-11 20:29:05] -rw------- 1 boinc boinc      1024 Oct 11 20:28 memory_monitor_summary.json
[2025-10-11 20:29:05] -rw------- 1 boinc boinc        95 Oct 11 20:28 pilot_heartbeat.json
[2025-10-11 20:29:05] -rw------- 1 boinc boinc    304187 Oct 11 20:28 log.46676269._060243.job.log.tgz.1
[2025-10-11 20:29:05] -rw------- 1 boinc boinc      7751 Oct 11 20:28 heartbeat.json
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc        27 Oct 11 20:29 wrapper_checkpoint.txt
[2025-10-11 20:29:05] -rw------- 1 boinc boinc       821 Oct 11 20:29 pilotlog.txt
[2025-10-11 20:29:05] -rw------- 1 boinc boinc   1043947 Oct 11 20:29 log.46676269._060243.job.log.1
[2025-10-11 20:29:05] -rw------- 1 boinc boinc       357 Oct 11 20:29 output.list
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc       620 Oct 11 20:29 runtime_log
[2025-10-11 20:29:05] -rw------- 1 boinc boinc   1372160 Oct 11 20:29 result.tar.gz
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc      8192 Oct 11 20:29 boinc_mmap_file
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc      8764 Oct 11 20:29 runtime_log.err
[2025-10-11 20:29:05] -rw------- 1 boinc boinc       644 Oct 11 20:29 JulNDm5mqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDBSMDmCUbgQn.diag
[2025-10-11 20:29:05] -rw-r--r-- 1 boinc boinc     21184 Oct 11 20:29 stderr.txt
[2025-10-11 20:29:05] HITS file was successfully produced:
[2025-10-11 20:29:05] -rw------- 1 boinc boinc 187952978 Oct 11 20:28 shared/HITS.pool.root.1
[2025-10-11 20:29:05]  *** Contents of shared directory: ***
[2025-10-11 20:29:05] total 402856
[2025-10-11 20:29:05] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:28 start_atlas.sh
[2025-10-11 20:29:05] -rw-r--r-- 2 boinc boinc    569674 Oct 11 18:28 input.tar.gz
[2025-10-11 20:29:05] -rw-r--r-- 2 boinc boinc 222598607 Oct 11 18:28 ATLAS.root_0
[2025-10-11 20:29:05] -rw------- 1 boinc boinc 187952978 Oct 11 20:28 HITS.pool.root.1
[2025-10-11 20:29:05] -rw------- 1 boinc boinc   1372160 Oct 11 20:29 result.tar.gz
20:29:06 (620769): run_atlas exited; CPU time 27938.755520
20:29:06 (620769): called boinc_finish(0)

</stderr_txt>
]]>

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