Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 12:29:20 (8992): vboxwrapper version 26210
2025-10-12 12:29:20 (8992): BOINC client version: 8.2.4
2025-10-12 12:29:21 (8992): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-10-12 12:29:21 (8992): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 12:29:21 (8992): Create VM. (boinc_ceb4e6b8c10efc00, slot#1)
2025-10-12 12:29:22 (8992): Setting Memory Size for VM. (4800MB)
2025-10-12 12:29:22 (8992): Setting CPU Count for VM. (8)
2025-10-12 12:29:22 (8992): Setting Chipset Options for VM.
2025-10-12 12:29:22 (8992): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 12:29:23 (8992): Setting Boot Options for VM.
2025-10-12 12:29:23 (8992): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 12:29:23 (8992): Enabling VM Network Access.
2025-10-12 12:29:24 (8992): Disabling USB Support for VM.
2025-10-12 12:29:24 (8992): Disabling COM Port Support for VM.
2025-10-12 12:29:24 (8992): Disabling LPT Port Support for VM.
2025-10-12 12:29:24 (8992): Disabling Audio Support for VM.
2025-10-12 12:29:25 (8992): Disabling Clipboard Support for VM.
2025-10-12 12:29:25 (8992): Disabling Drag and Drop Support for VM.
2025-10-12 12:29:25 (8992): Adding storage controller(s) to VM.
2025-10-12 12:29:25 (8992): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 12:29:26 (8992): Adding VirtualBox Guest Additions to VM.
2025-10-12 12:29:26 (8992): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 12:29:26 (8992): forwarding host port 58083 to guest port 80
2025-10-12 12:29:27 (8992): Enabling remote desktop for VM.
2025-10-12 12:29:27 (8992): Required extension pack not installed, remote desktop not enabled.
2025-10-12 12:29:27 (8992): Enabling shared directory for VM.
2025-10-12 12:29:27 (8992): Starting VM using VBoxManage interface. (boinc_ceb4e6b8c10efc00, slot#1)
2025-10-12 12:29:33 (8992): Successfully started VM. (PID = '3752')
2025-10-12 12:29:33 (8992): Reporting VM Process ID to BOINC.
2025-10-12 12:29:34 (8992): Guest Log: BIOS: VirtualBox 7.1.10
2025-10-12 12:29:34 (8992): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 12:29:34 (8992): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 12:29:34 (8992): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 12:29:34 (8992): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 12:29:34 (8992): Detected: Web Application Enabled (http://localhost:58083)
2025-10-12 12:29:34 (8992): Preference change detected
2025-10-12 12:29:34 (8992): Setting CPU throttle for VM. (100%)
2025-10-12 12:29:34 (8992): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 12:29:36 (8992): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 12:29:36 (8992): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 12:29:39 (8992): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 12:29:39 (8992): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 12:29:39 (8992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 12:29:45 (8992): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 12:29:45 (8992): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 12:29:50 (8992): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 12:29:50 (8992): Guest Log: 00:00:00.000231 main     Log opened 2025-10-12T12:29:47.550954000Z
2025-10-12 12:29:50 (8992): Guest Log: 00:00:00.000367 main     OS Product: Linux
2025-10-12 12:29:50 (8992): Guest Log: 00:00:00.000411 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 12:29:50 (8992): Guest Log: 00:00:00.000450 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 12:29:50 (8992): Guest Log: 00:00:00.000488 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 12:29:50 (8992): Guest Log: 00:00:00.000489 main     Process ID: 1380
2025-10-12 12:29:50 (8992): Guest Log: 00:00:00.000490 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 12:29:50 (8992): Guest Log: 00:00:00.001332 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 12:29:51 (8992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 12:29:51 (8992): Guest Log: [INFO] Mounting shared directory
2025-10-12 12:29:51 (8992): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 12:29:55 (8992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 12:29:55 (8992): Guest Log: [INFO] Detected branch: prod
2025-10-12 12:29:55 (8992): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 12:29:55 (8992): Guest Log: Copying input files
2025-10-12 12:29:57 (8992): Guest Log: Copied input files into RunAtlas.
2025-10-12 12:29:57 (8992): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 12:29:57 (8992): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 12:29:57 (8992): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 12:29:57 (8992): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 12:30:00 (8992): Guest Log: 00:00:10.006996 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 537 520 000ns (GuestNow=1 760 265 000 016 094 000 ns GuestLast=1 760 272 187 553 614 000 ns fSetTimeLastLoop=true )
2025-10-12 12:30:05 (8992): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 12:30:06 (8992): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 12:30:06 (8992): Guest Log: 2.6.3.0 1658 0 30188 151617 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 12:30:06 (8992): Guest Log: copied the webapp to /var/www
2025-10-12 12:30:06 (8992): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-12 12:30:06 (8992): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-12 12:30:07 (8992): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 12:30:07 (8992): Guest Log:  *** Starting ATLAS job. (PandaID=6838454871 taskID=46676269) ***
2025-10-12 14:09:39 (8992): Status Report: Elapsed Time: '6000.000000'
2025-10-12 14:09:39 (8992): Status Report: CPU Time: '43348.812500'
2025-10-12 15:24:32 (8992): Guest Log:  *** Job finished ***
2025-10-12 15:24:32 (8992): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:27,133 | INFO     | PID=6095 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:27,135 | INFO     | found 0 job(s) in 20 queues
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:27,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:27,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:27,135 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:27,135 | INFO     | [monitor] control thread has ended
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:30,969 | INFO     | all workflow threads have been joined
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:30,969 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:30,970 | INFO     | traces error code: 0
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:30,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,059 [wrapper] ==== pilot stdout END ====
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,068 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,076 [wrapper] pilotpid: 6095
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,081 [wrapper] Pilot exit status: 0
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,210 [wrapper] pandaids: 6838454871
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,261 [wrapper] cleanup supervisor_pilot  7072 6096
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,274 [wrapper] Test setup, not cleaning
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,281 [wrapper] apfmon messages muted
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,289 [wrapper] ==== wrapper stdout END ====
2025-10-12 15:24:32 (8992): Guest Log: 2025-10-12 13:24:31,296 [wrapper] ==== wrapper stderr END ====
2025-10-12 15:24:32 (8992): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 15:24:32 (8992): Guest Log:     "exeErrorCode": 0,
2025-10-12 15:24:32 (8992): Guest Log:     "exeErrorDiag": "",
2025-10-12 15:24:32 (8992): Guest Log:     "pilotErrorCode": 0,
2025-10-12 15:24:32 (8992): Guest Log:     "pilotErrorDiag": "",
2025-10-12 15:24:32 (8992): Guest Log:  *** Listing of results directory ***
2025-10-12 15:24:32 (8992): Guest Log: total 193324
2025-10-12 15:24:32 (8992): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 14:01 pilot3.tar.gz
2025-10-12 15:24:32 (8992): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 14:53 runpilot2-wrapper.sh
2025-10-12 15:24:32 (8992): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 14:53 queuedata.json
2025-10-12 15:24:32 (8992): Guest Log: -rwxr-xr-x. 1 atlas atlas      8499 Oct 12 10:29 init_data.xml
2025-10-12 15:24:32 (8992): Guest Log: -rwxr-xr-x. 1 atlas atlas    569675 Oct 12 10:29 input.tar.gz
2025-10-12 15:24:32 (8992): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 10:29 start_atlas.sh
2025-10-12 15:24:32 (8992): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 10:29 EVNT.46676267._002405.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 15:24:32 (8992): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 10:30 pandaJob.out
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas    975520 Oct 12 10:31 agis_schedconf.cvmfs.json
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 10:31 agis_ddmendpoints.agis.ALL.json
2025-10-12 15:24:32 (8992): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 10:31 pilot3
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas 190584727 Oct 12 13:23 HITS.46676269._059557.pool.root.1
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 12 13:23 memory_monitor_summary.json
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas    395281 Oct 12 13:23 log.46676269._059557.job.log.tgz.1
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas      7794 Oct 12 13:23 heartbeat.json
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 13:24 pilot_heartbeat.json
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 12 13:24 pilotlog.txt
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas   1372855 Oct 12 13:24 log.46676269._059557.job.log.1
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 13:24 output.list
2025-10-12 15:24:32 (8992): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 13:24 runtime_log
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas   1792000 Oct 12 13:24 result.tar.gz
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas       656 Oct 12 13:24 sgSMDms9pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm05RMDmRnvAYn.diag
2025-10-12 15:24:32 (8992): Guest Log: -rw-r--r--. 1 atlas atlas      8670 Oct 12 13:24 runtime_log.err
2025-10-12 15:24:32 (8992): Guest Log: Looking for outputfile HITS.46676269._059557.pool.root.1
2025-10-12 15:24:32 (8992): Guest Log: HITS file was successfully produced
2025-10-12 15:24:32 (8992): Guest Log: -rw-------. 1 atlas atlas 190584727 Oct 12 13:23 /home/atlas/RunAtlas/HITS.46676269._059557.pool.root.1
2025-10-12 15:24:33 (8992): Guest Log: Successfully finished the ATLAS job!
2025-10-12 15:24:33 (8992): Guest Log: Copying the results back to the shared directory!
2025-10-12 15:24:33 (8992): Guest Log:  *** Contents of shared directory: ***
2025-10-12 15:24:34 (8992): Guest Log: total 404348
2025-10-12 15:24:34 (8992): Guest Log: -rwxrwxrwx. 1 root root 221066963 Oct 12 10:29 ATLAS.root_0
2025-10-12 15:24:34 (8992): Guest Log: -rwxrwxrwx. 1 root root 190584727 Oct 12 13:24 HITS.pool.root.1
2025-10-12 15:24:34 (8992): Guest Log: -rwxrwxrwx. 1 root root      8499 Oct 12 10:29 init_data.xml
2025-10-12 15:24:34 (8992): Guest Log: -rwxrwxrwx. 1 root root    569675 Oct 11 20:22 input.tar.gz
2025-10-12 15:24:34 (8992): Guest Log: -rwxrwxrwx. 1 root root   1792000 Oct 12 13:24 result.tar.gz
2025-10-12 15:24:34 (8992): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 20:22 start_atlas.sh
2025-10-12 15:24:34 (8992): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 15:24:34 (8992): VM Completion File Detected.
2025-10-12 15:24:34 (8992): Powering off VM.
2025-10-12 15:24:35 (8992): Successfully stopped VM.
2025-10-12 15:24:35 (8992): Deregistering VM. (boinc_ceb4e6b8c10efc00, slot#1)
2025-10-12 15:24:35 (8992): Removing network bandwidth throttle group from VM.
2025-10-12 15:24:35 (8992): Removing VM from VirtualBox.
2025-10-12 15:24:41 (8992): called boinc_finish(0)

</stderr_txt>
]]>

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