Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:52:48 (2244377): wrapper (7.7.26015): starting
07:52:48 (2244377): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 07:52:48] Arguments: --nthreads 2
[2025-10-12 07:52:48] Threads: 2
[2025-10-12 07:52:48] Checking for CVMFS
[2025-10-12 07:52:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:52:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:52:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:52:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:52:48] 2.9.2.0 1315929 4005 58208 151609 2 57 30315234 36864001 0 130560 0 2433514 99.989 133068 747 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 07:52:48] CVMFS is ok
[2025-10-12 07:52:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:52:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:52:48] Further information can be found at the LHC@home message board.
[2025-10-12 07:52:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:52:48] Checking for apptainer binary...
[2025-10-12 07:52:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:52:48] Running /usr/bin/apptainer --version
[2025-10-12 07:52:48] apptainer version 1.4.1-1.1
[2025-10-12 07:52:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:52:48] thA331
[2025-10-12 07:52:48] apptainer works
[2025-10-12 07:52:48] Set ATHENA_PROC_NUMBER=2
[2025-10-12 07:52:48] Set ATHENA_CORE_NUMBER=2
[2025-10-12 07:52:48] Starting ATLAS job with PandaID=6838603285
[2025-10-12 07:52:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:58:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:58:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:58:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:58:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:58:32] 
[2025-10-12 09:58:32] 2025-10-12 07:58:01,804 | INFO     | ***************************************
[2025-10-12 09:58:32] 2025-10-12 07:58:02,307 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 09:58:32] 2025-10-12 07:58:02,337 | INFO     | sufficient remaining disk space (229825839104 B)
[2025-10-12 09:58:32] 2025-10-12 07:58:02,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:58:32] 2025-10-12 07:58:02,337 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:58:32] 2025-10-12 07:58:02,338 | INFO     | update_server=False
[2025-10-12 09:58:32] 2025-10-12 07:58:02,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:58:32] 2025-10-12 07:58:02,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:58:32] 2025-10-12 07:58:02,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:58:32] 2025-10-12 07:58:02,809 | INFO     | all data control threads have been joined
[2025-10-12 09:58:32] 2025-10-12 07:58:03,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:58:32] 2025-10-12 07:58:03,200 | INFO     | aborting loop
[2025-10-12 09:58:32] 2025-10-12 07:58:03,344 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:03,346 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:03,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:03,467 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:03,474 | INFO     | [job] validate thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:03,575 | INFO     | all payload control threads have been joined
[2025-10-12 09:58:32] 2025-10-12 07:58:03,769 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:03,815 | INFO     | [data] control thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:03,848 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:03,913 | INFO     | all job control threads have been joined
[2025-10-12 09:58:32] 2025-10-12 07:58:04,130 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:04,205 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:04,345 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:04,577 | INFO     | [payload] control thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:04,800 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:04,919 | INFO     | [job] control thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:05,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:58:32] 2025-10-12 07:58:06,268 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:06,616 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:58:32] 2025-10-12 07:58:12,105 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:58:32] 2025-10-12 07:58:12,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522842785600)>', '<ExcThread(monitor, started 140522127615744)>']
[2025-10-12 09:58:32] 2025-10-12 07:58:17,405 | INFO     | all workflow threads have been joined
[2025-10-12 09:58:32] 2025-10-12 07:58:17,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:58:32] 2025-10-12 07:58:17,406 | INFO     | traces error code: 0
[2025-10-12 09:58:32] 2025-10-12 07:58:17,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:58:32] 2025-10-12 07:58:32,880 | INFO     | PID=2248082 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:58:32] 2025-10-12 07:58:32,880 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:58:32] 2025-10-12 07:58:32,880 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:58:32] 2025-10-12 07:58:32,880 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:58:32] 2025-10-12 07:58:32,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:58:32] 2025-10-12 07:58:32,880 | INFO     | [monitor] control thread has ended
[2025-10-12 09:58:32] 2025-10-12 07:58:32,920 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:58:32] 2025-10-12 07:58:32,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:58:32] 2025-10-12 07:58:32,925 [wrapper] pilotpid: 2248082
[2025-10-12 09:58:32] 2025-10-12 07:58:32,927 [wrapper] Pilot exit status: 0
[2025-10-12 09:58:32] 2025-10-12 07:58:32,933 [wrapper] pandaids: 6838603285
[2025-10-12 09:58:32] 2025-10-12 07:58:32,946 [wrapper] cleanup supervisor_pilot 2268909 2248083
[2025-10-12 09:58:32] 2025-10-12 07:58:32,948 [wrapper] Test setup, not cleaning
[2025-10-12 09:58:32] 2025-10-12 07:58:32,950 [wrapper] apfmon messages muted
[2025-10-12 09:58:32] 2025-10-12 07:58:32,952 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:58:32] 2025-10-12 07:58:32,954 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:58:32]  *** Error codes and diagnostics ***
[2025-10-12 09:58:32]     "exeErrorCode": 0,
[2025-10-12 09:58:32]     "exeErrorDiag": "",
[2025-10-12 09:58:32]     "pilotErrorCode": 0,
[2025-10-12 09:58:32]     "pilotErrorDiag": "",
[2025-10-12 09:58:32]  *** Listing of results directory ***
[2025-10-12 09:58:32] total 416208
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:05 pilot3.tar.gz
[2025-10-12 09:58:32] -rwx------ 1 boinc boinc     36292 Oct 11 17:06 runpilot2-wrapper.sh
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:06 queuedata.json
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc       100 Oct 12 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:58:32] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 07:52 run_atlas
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc       105 Oct 12 07:52 job.xml
[2025-10-12 09:58:32] -rw-r--r-- 2 boinc boinc 223491191 Oct 12 07:52 EVNT.46676267._002396.pool.root.1
[2025-10-12 09:58:32] -rw-r--r-- 2 boinc boinc    569677 Oct 12 07:52 input.tar.gz
[2025-10-12 09:58:32] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:52 start_atlas.sh
[2025-10-12 09:58:32] drwxrwx--x 2 boinc boinc      4096 Oct 12 07:52 shared
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc         0 Oct 12 07:52 boinc_setup_complete
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc      6206 Oct 12 07:52 init_data.xml
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc         0 Oct 12 07:52 boinc_lockfile
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc      2550 Oct 12 07:52 pandaJob.out
[2025-10-12 09:58:32] -rw------- 1 boinc boinc    975528 Oct 12 07:53 agis_schedconf.cvmfs.json
[2025-10-12 09:58:32] -rw------- 1 boinc boinc   1560580 Oct 12 07:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:58:32] drwx------ 5 boinc boinc      4096 Oct 12 07:53 pilot3
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc       530 Oct 12 09:57 boinc_task_state.xml
[2025-10-12 09:58:32] -rw------- 1 boinc boinc 196117727 Oct 12 09:57 HITS.46676269._060003.pool.root.1
[2025-10-12 09:58:32] -rw------- 1 boinc boinc        95 Oct 12 09:57 pilot_heartbeat.json
[2025-10-12 09:58:32] -rw------- 1 boinc boinc      1017 Oct 12 09:57 memory_monitor_summary.json
[2025-10-12 09:58:32] -rw------- 1 boinc boinc    264418 Oct 12 09:57 log.46676269._060003.job.log.tgz.1
[2025-10-12 09:58:32] -rw------- 1 boinc boinc      7751 Oct 12 09:58 heartbeat.json
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc      8192 Oct 12 09:58 boinc_mmap_file
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc        27 Oct 12 09:58 wrapper_checkpoint.txt
[2025-10-12 09:58:32] -rw------- 1 boinc boinc       747 Oct 12 09:58 pilotlog.txt
[2025-10-12 09:58:32] -rw------- 1 boinc boinc   1084032 Oct 12 09:58 log.46676269._060003.job.log.1
[2025-10-12 09:58:32] -rw------- 1 boinc boinc       357 Oct 12 09:58 output.list
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc       620 Oct 12 09:58 runtime_log
[2025-10-12 09:58:32] -rw------- 1 boinc boinc   1372160 Oct 12 09:58 result.tar.gz
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc      8777 Oct 12 09:58 runtime_log.err
[2025-10-12 09:58:32] -rw------- 1 boinc boinc       659 Oct 12 09:58 nI2LDm1LqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm77RMDmwspVim.diag
[2025-10-12 09:58:32] -rw-r--r-- 1 boinc boinc      8153 Oct 12 09:58 stderr.txt
[2025-10-12 09:58:32] HITS file was successfully produced:
[2025-10-12 09:58:33] -rw------- 1 boinc boinc 196117727 Oct 12 09:57 shared/HITS.pool.root.1
[2025-10-12 09:58:33]  *** Contents of shared directory: ***
[2025-10-12 09:58:33] total 411704
[2025-10-12 09:58:33] -rw-r--r-- 2 boinc boinc 223491191 Oct 12 07:52 ATLAS.root_0
[2025-10-12 09:58:33] -rw-r--r-- 2 boinc boinc    569677 Oct 12 07:52 input.tar.gz
[2025-10-12 09:58:33] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:52 start_atlas.sh
[2025-10-12 09:58:33] -rw------- 1 boinc boinc 196117727 Oct 12 09:57 HITS.pool.root.1
[2025-10-12 09:58:33] -rw------- 1 boinc boinc   1372160 Oct 12 09:58 result.tar.gz
09:58:34 (2244377): run_atlas exited; CPU time 14610.180891
09:58:34 (2244377): called boinc_finish(0)

</stderr_txt>
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