Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:55 (3478304): wrapper (7.7.26015): starting
16:36:55 (3478304): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:36:55] Arguments: --nthreads 8
[2025-10-11 16:36:55] Threads: 8
[2025-10-11 16:36:55] Checking for CVMFS
[2025-10-11 16:36:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:36:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:36:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:36:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:36:59] 2.13.2.0 7655 56336 380192 151595 0 339 22947560 32935937 32300 16776704 10 88208755 99.527 111184849 8812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 16:36:59] CVMFS is ok
[2025-10-11 16:36:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:36:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:36:59] Further information can be found at the LHC@home message board.
[2025-10-11 16:36:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:36:59] Checking for apptainer binary...
[2025-10-11 16:36:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:36:59] Running /usr/bin/apptainer --version
[2025-10-11 16:37:00] apptainer version 1.4.3-1.el9
[2025-10-11 16:37:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:37:01] c6-12-25-4.aglt2.org
[2025-10-11 16:37:01] apptainer works
[2025-10-11 16:37:01] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:37:01] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:37:01] Starting ATLAS job with PandaID=6838602939
[2025-10-11 16:37:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:39:23]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:39:23] 2025-10-12 05:11:06,009 | INFO     | chi2: 10.711430165040529
[2025-10-12 01:39:23] 2025-10-12 05:11:06,011 | INFO     | sum of square deviations: 37154370075.7322
[2025-10-12 01:39:23] 2025-10-12 05:11:06,123 | INFO     | sum of deviations: 446330478150.5158
[2025-10-12 01:39:23] 2025-10-12 05:11:06,123 | INFO     | mean x: 1760230418.05071
[2025-10-12 01:39:23] 2025-10-12 05:11:06,124 | INFO     | mean y: 2356002.099391481
[2025-10-12 01:39:23] 2025-10-12 05:11:06,124 | INFO     | -- intersect: -21143056570.964478
[2025-10-12 01:39:23] 2025-10-12 05:11:06,124 | INFO     | intersect: -21143056570.964478
[2025-10-12 01:39:23] 2025-10-12 05:11:06,152 | INFO     | chi2: 6.81786677912234
[2025-10-12 01:39:23] 2025-10-12 05:11:06,153 | INFO     | current chi2=6.81786677912234 (change=36.34961275876886 %)
[2025-10-12 01:39:23] 2025-10-12 05:11:06,154 | INFO     | sum of square deviations: 36035113013.33594
[2025-10-12 01:39:23] 2025-10-12 05:11:06,211 | INFO     | sum of deviations: 443340213540.85266
[2025-10-12 01:39:23] 2025-10-12 05:11:06,212 | INFO     | mean x: 1760230265.5368853
[2025-10-12 01:39:23] 2025-10-12 05:11:06,212 | INFO     | mean y: 2355594.5081967213
[2025-10-12 01:39:23] 2025-10-12 05:11:06,212 | INFO     | -- intersect: -21653768017.908108
[2025-10-12 01:39:23] 2025-10-12 05:11:06,217 | INFO     | intersect: -21653768017.908108
[2025-10-12 01:39:23] 2025-10-12 05:11:06,219 | INFO     | chi2: 6.813434623613119
[2025-10-12 01:39:23] 2025-10-12 05:11:06,219 | INFO     | current chi2=6.813434623613119 (change=0.06500795120833376 %)
[2025-10-12 01:39:23] 2025-10-12 05:11:06,220 | INFO     | right removable region: 487
[2025-10-12 01:39:23] 2025-10-12 05:11:06,225 | INFO     | sum of square deviations: 37154144254.83176
[2025-10-12 01:39:23] 2025-10-12 05:11:06,277 | INFO     | sum of deviations: 136891255813.76454
[2025-10-12 01:39:23] 2025-10-12 05:11:06,278 | INFO     | mean x: 1760230723.0486815
[2025-10-12 01:39:23] 2025-10-12 05:11:06,278 | INFO     | mean y: 2355686.1764705884
[2025-10-12 01:39:23] 2025-10-12 05:11:06,279 | INFO     | -- intersect: -6483063343.997231
[2025-10-12 01:39:23] 2025-10-12 05:11:06,279 | INFO     | intersect: -6483063343.997231
[2025-10-12 01:39:23] 2025-10-12 05:11:06,285 | INFO     | chi2: 6.797807060368604
[2025-10-12 01:39:23] 2025-10-12 05:11:06,286 | INFO     | current chi2=6.797807060368604 (change=36.536886712336766 %)
[2025-10-12 01:39:23] 2025-10-12 05:11:06,292 | INFO     | sum of square deviations: 36035082534.81963
[2025-10-12 01:39:23] 2025-10-12 05:11:06,328 | INFO     | sum of deviations: 26837578493.319748
[2025-10-12 01:39:23] 2025-10-12 05:11:06,337 | INFO     | mean x: 1760230875.5491803
[2025-10-12 01:39:23] 2025-10-12 05:11:06,337 | INFO     | mean y: 2370677.174180328
[2025-10-12 01:39:23] 2025-10-12 05:11:06,337 | INFO     | -- intersect: -1308583286.7377696
[2025-10-12 01:39:23] 2025-10-12 05:11:06,337 | INFO     | intersect: -1308583286.7377696
[2025-10-12 01:39:23] 2025-10-12 05:11:06,339 | INFO     | chi2: 4.892741242785473
[2025-10-12 01:39:23] 2025-10-12 05:11:06,340 | INFO     | current chi2=4.892741242785473 (change=28.02471150865278 %)
[2025-10-12 01:39:23] 2025-10-12 05:11:06,345 | INFO     | sum of square deviations: 34938689883.70575
[2025-10-12 01:39:23] 2025-10-12 05:11:06,384 | INFO     | sum of deviations: -28967255274.98338
[2025-10-12 01:39:23] 2025-10-12 05:11:06,389 | INFO     | mean x: 1760231028.0517597
[2025-10-12 01:39:23] 2025-10-12 05:11:06,389 | INFO     | mean y: 2378431.039337474
[2025-10-12 01:39:23] 2025-10-12 05:11:06,390 | INFO     | -- intersect: 1461765194.0301664
[2025-10-12 01:39:23] 2025-10-12 05:11:06,390 | INFO     | intersect: 1461765194.0301664
[2025-10-12 01:39:23] 2025-10-12 05:11:06,392 | INFO     | chi2: 4.386049058627535
[2025-10-12 01:39:23] 2025-10-12 05:11:06,392 | INFO     | current chi2=4.386049058627535 (change=10.35599797772004 %)
[2025-10-12 01:39:23] 2025-10-12 05:11:06,397 | INFO     | left removable region: 30
[2025-10-12 01:39:23] 2025-10-12 05:11:06,398 | INFO     | sum of square deviations: 29594651498.50768
[2025-10-12 01:39:23] 2025-10-12 05:11:06,428 | INFO     | sum of deviations: 50355786476.97147
[2025-10-12 01:39:23] 2025-10-12 05:11:06,516 | INFO     | mean x: 1760231150.0328228
[2025-10-12 01:39:23] 2025-10-12 05:11:06,516 | INFO     | mean y: 2411628.7352297595
[2025-10-12 01:39:23] 2025-10-12 05:11:06,516 | INFO     | -- intersect: -2992650635.9998813
[2025-10-12 01:39:23] 2025-10-12 05:11:06,517 | INFO     | intersect: -2992650635.9998813
[2025-10-12 01:39:23] 2025-10-12 05:11:06,519 | INFO     | chi2: 0.01930443856087556
[2025-10-12 01:39:23] 2025-10-12 05:11:06,519 | INFO     | -- intersect: -2992650635.9998813
[2025-10-12 01:39:23] 2025-10-12 05:11:06,524 | INFO     | current memory leak: 1.70 B/s (using 457 data points, chi2=0.02)
[2025-10-12 01:39:23] 2025-10-12 05:11:06,526 | INFO     | could have reported an average CPU frequency of 999 MHz (20 samples)
[2025-10-12 01:39:23] 2025-10-12 05:11:06,526 | INFO     | ..............................
[2025-10-12 01:39:23] 2025-10-12 05:11:06,527 | INFO     | . Timing measurements:
[2025-10-12 01:39:23] 2025-10-12 05:11:06,527 | INFO     | . get job = 2 s
[2025-10-12 01:39:23] 2025-10-12 05:11:06,539 | INFO     | . initial setup = 16 s
[2025-10-12 01:39:23] 2025-10-12 05:11:06,540 | INFO     | . payload setup = 80 s
[2025-10-12 01:39:23] 2025-10-12 05:11:06,540 | INFO     | . stage-in = 1 s
[2025-10-12 01:39:23] 2025-10-12 05:11:06,540 | INFO     | . payload execution = 30420 s
[2025-10-12 01:39:23] 2025-10-12 05:11:06,541 | INFO     | . stage-out = 12 s
[2025-10-12 01:39:23] 2025-10-12 05:11:06,541 | INFO     | . log creation = 2 s
[2025-10-12 01:39:23] 2025-10-12 05:11:06,541 | INFO     | ..............................
[2025-10-12 01:39:23] 2025-10-12 05:11:12,717 | INFO     | 
[2025-10-12 01:39:23] 2025-10-12 05:11:12,718 | INFO     | job summary report
[2025-10-12 01:39:23] 2025-10-12 05:11:12,718 | INFO     | --------------------------------------------------
[2025-10-12 01:39:23] 2025-10-12 05:11:12,718 | INFO     | PanDA job id: 6838602939
[2025-10-12 01:39:23] 2025-10-12 05:11:12,719 | INFO     | task id: 46676269
[2025-10-12 01:39:23] 2025-10-12 05:11:12,719 | INFO     | errors: (none)
[2025-10-12 01:39:23] 2025-10-12 05:11:12,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:39:23] 2025-10-12 05:11:12,719 | INFO     | pilot state: finished 
[2025-10-12 01:39:23] 2025-10-12 05:11:12,719 | INFO     | transexitcode: 0
[2025-10-12 01:39:23] 2025-10-12 05:11:12,720 | INFO     | exeerrorcode: 0
[2025-10-12 01:39:23] 2025-10-12 05:11:12,720 | INFO     | exeerrordiag: 
[2025-10-12 01:39:23] 2025-10-12 05:11:12,720 | INFO     | exitcode: 0
[2025-10-12 01:39:23] 2025-10-12 05:11:12,741 | INFO     | exitmsg: OK
[2025-10-12 01:39:23] 2025-10-12 05:11:12,741 | INFO     | cpuconsumptiontime: 118866 s
[2025-10-12 01:39:23] 2025-10-12 05:11:12,741 | INFO     | nevents: 400
[2025-10-12 01:39:23] 2025-10-12 05:11:12,741 | INFO     | neventsw: 0
[2025-10-12 01:39:23] 2025-10-12 05:11:12,742 | INFO     | pid: 3500322
[2025-10-12 01:39:23] 2025-10-12 05:11:12,742 | INFO     | pgrp: 3500322
[2025-10-12 01:39:23] 2025-10-12 05:11:12,742 | INFO     | corecount: 8
[2025-10-12 01:39:23] 2025-10-12 05:11:12,742 | INFO     | event service: False
[2025-10-12 01:39:23] 2025-10-12 05:11:12,742 | INFO     | sizes: {0: 2348029, 2: 2348630, 4: 2348714, 5: 2348742, 6: 2348969, 7: 2348997, 8: 2349153, 20: 2349181, 32: 2349209, 43: 2349237, 56: 2349265, 68: 2349573, 73: 23
[2025-10-12 01:39:23] 2025-10-12 05:11:12,743 | INFO     | --------------------------------------------------
[2025-10-12 01:39:23] 2025-10-12 05:11:12,743 | INFO     | 
[2025-10-12 01:39:23] 2025-10-12 05:11:12,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 01:39:23] 2025-10-12 05:11:12,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:12,939 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:12,940 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:12,940 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:12,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:12,941 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:12,941 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:39:23] 2025-10-12 05:11:13,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:39:23] 2025-10-12 05:11:13,557 | INFO     | job 6838602939 has completed (purged errors)
[2025-10-12 01:39:23] 2025-10-12 05:11:13,557 | INFO     | overall cleanup function is called
[2025-10-12 01:39:23] 2025-10-12 05:11:14,902 | INFO     | --- collectZombieJob: --- 10, [3500322]
[2025-10-12 01:39:23] 2025-10-12 05:11:14,903 | INFO     | zombie collector waiting for pid 3500322
[2025-10-12 01:39:23] 2025-10-12 05:11:14,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:39:23] 2025-10-12 05:11:14,904 | INFO     | collected zombie processes
[2025-10-12 01:39:23] 2025-10-12 05:11:14,904 | INFO     | will attempt to kill all subprocesses of pid=3500322
[2025-10-12 01:39:23] 2025-10-12 05:11:34,815 | INFO     | PID=3483215 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:39:23] 2025-10-12 05:11:34,816 | INFO     | .. there are 40 such processes running
[2025-10-12 01:39:23] 2025-10-12 05:11:34,888 | INFO     | process IDs to be killed: [3500322] (in reverse order)
[2025-10-12 01:39:23] 2025-10-12 05:11:35,902 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:39:23] 2025-10-12 05:11:35,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:39:23] 2025-10-12 05:11:36,432 | INFO     | did not find any defunct processes belonging to 3500322
[2025-10-12 01:39:23] 2025-10-12 05:11:37,396 | INFO     | did not find any defunct processes belonging to 3500322
[2025-10-12 01:39:23] 2025-10-12 05:11:37,397 | INFO     | ready for new job
[2025-10-12 01:39:23] 2025-10-12 05:11:37,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:39:23] 2025-10-12 05:11:37,455 | INFO     | ***************************************
[2025-10-12 01:39:23] 2025-10-12 05:11:37,497 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:39:23] 2025-10-12 05:11:37,497 | INFO     | ***************************************
[2025-10-12 01:39:23] 2025-10-12 05:11:37,497 | INFO     | 
[2025-10-12 01:39:23] 2025-10-12 05:11:37,647 | INFO     | architecture information:
[2025-10-12 01:39:23] 2025-10-12 05:11:37,822 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:39:23] 2025-10-12 05:11:39,140 | INFO     | cat /etc/os-release:
[2025-10-12 01:39:23] NAME="CentOS Linux"
[2025-10-12 01:39:23] VERSION="7 (Core)"
[2025-10-12 01:39:23] ID="centos"
[2025-10-12 01:39:23] ID_LIKE="rhel fedora"
[2025-10-12 01:39:23] VERSION_ID="7"
[2025-10-12 01:39:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:39:23] ANSI_COLOR="0;31"
[2025-10-12 01:39:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:39:23] HOME_URL="https://www.centos.org/"
[2025-10-12 01:39:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:39:23] 
[2025-10-12 01:39:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:39:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:39:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:39:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:39:23] 
[2025-10-12 01:39:23] 2025-10-12 05:11:39,141 | INFO     | ***************************************
[2025-10-12 01:39:23] 2025-10-12 05:11:39,645 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 01:39:23] 2025-10-12 05:11:39,765 | INFO     | sufficient remaining disk space (93095723008 B)
[2025-10-12 01:39:23] 2025-10-12 05:11:39,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:39:23] 2025-10-12 05:11:39,767 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:39:23] 2025-10-12 05:11:39,767 | INFO     | update_server=False
[2025-10-12 01:39:23] 2025-10-12 05:11:39,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:39:23] 2025-10-12 05:11:39,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:39:23] 2025-10-12 05:11:39,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:39:23] 2025-10-12 05:11:39,768 | INFO     | aborting loop
[2025-10-12 01:39:23] 2025-10-12 05:11:39,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:39:23] 2025-10-12 05:11:39,806 | INFO     | all job control threads have been joined
[2025-10-12 01:39:23] 2025-10-12 05:11:40,352 | INFO     | all data control threads have been joined
[2025-10-12 01:39:23] 2025-10-12 05:11:40,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:39:23] 2025-10-12 05:11:40,773 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:40,774 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:40,775 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:40,813 | INFO     | [job] control thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:41,069 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:41,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:41,092 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:41,225 | INFO     | all payload control threads have been joined
[2025-10-12 01:39:23] 2025-10-12 05:11:41,372 | INFO     | [data] control thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:41,585 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:41,611 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:41,723 | INFO     | [job] validate thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:41,850 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:41,858 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:42,233 | INFO     | [payload] control thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:42,574 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:43,787 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:39:23] 2025-10-12 05:11:53,896 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:39:23] 2025-10-12 05:11:54,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139994733512512)>', '<ExcThread(monitor, started 139994089895680)>']
[2025-10-12 01:39:23] 2025-10-12 05:11:59,268 | INFO     | all workflow threads have been joined
[2025-10-12 01:39:23] 2025-10-12 05:11:59,301 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:39:23] 2025-10-12 05:11:59,302 | INFO     | traces error code: 0
[2025-10-12 01:39:23] 2025-10-12 05:11:59,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:39:23] 2025-10-12 05:12:13,880 | INFO     | PID=3483215 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:39:23] 2025-10-12 05:12:13,881 | INFO     | .. there are 40 such processes running
[2025-10-12 01:39:23] 2025-10-12 05:12:13,882 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:39:23] 2025-10-12 05:12:13,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:39:23] 2025-10-12 05:12:13,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:39:23] 2025-10-12 05:12:13,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:39:23] 2025-10-12 05:12:13,892 | INFO     | [monitor] control thread has ended
[2025-10-12 01:39:23] 2025-10-12 05:12:17,034 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:39:23] 2025-10-12 05:12:17,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:39:23] 2025-10-12 05:12:17,114 [wrapper] pilotpid: 3483215
[2025-10-12 01:39:23] 2025-10-12 05:12:17,150 [wrapper] Pilot exit status: 0
[2025-10-12 01:39:23] 2025-10-12 05:12:17,361 [wrapper] pandaids: 6838602939
[2025-10-12 01:39:23] 2025-10-12 05:12:17,764 [wrapper] cleanup supervisor_pilot  786874 3483216
[2025-10-12 01:39:23] 2025-10-12 05:12:17,774 [wrapper] Test setup, not cleaning
[2025-10-12 01:39:23] 2025-10-12 05:12:17,780 [wrapper] apfmon messages muted
[2025-10-12 01:39:23] 2025-10-12 05:12:17,786 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:39:23] 2025-10-12 05:12:17,793 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:39:23]  *** Error codes and diagnostics ***
[2025-10-12 01:39:23]     "exeErrorCode": 0,
[2025-10-12 01:39:23]     "exeErrorDiag": "",
[2025-10-12 01:39:23]     "pilotErrorCode": 0,
[2025-10-12 01:39:23]     "pilotErrorDiag": "",
[2025-10-12 01:39:23]  *** Listing of results directory ***
[2025-10-12 01:39:23] total 410996
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 10:55 queuedata.json
[2025-10-12 01:39:23] -rwx------. 1 boincer umatlas     36292 Oct 11 10:59 runpilot2-wrapper.sh
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:39:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:36 run_atlas
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:36 job.xml
[2025-10-12 01:39:23] -rw-r--r--. 2 boincer umatlas 219484956 Oct 11 16:36 EVNT.46676267._002362.pool.root.1
[2025-10-12 01:39:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:36 start_atlas.sh
[2025-10-12 01:39:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:36 shared
[2025-10-12 01:39:23] -rw-r--r--. 2 boincer umatlas    569684 Oct 11 16:36 input.tar.gz
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:36 boinc_lockfile
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 16:37 pandaJob.out
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas    975528 Oct 11 16:38 agis_schedconf.cvmfs.json
[2025-10-12 01:39:23] drwx------. 5 boincer umatlas      4096 Oct 11 16:39 pilot3
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas 190563225 Oct 12 01:03 HITS.46676269._059796.pool.root.1
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas       532 Oct 12 01:04 boinc_task_state.xml
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas      1053 Oct 12 01:09 memory_monitor_summary.json
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas   1560580 Oct 12 01:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas    614846 Oct 12 01:09 log.46676269._059796.job.log.tgz.1
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas      7862 Oct 12 01:11 heartbeat.json
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas        95 Oct 12 01:11 pilot_heartbeat.json
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas       823 Oct 12 01:12 pilotlog.txt
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas   2838420 Oct 12 01:12 log.46676269._059796.job.log.1
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas       357 Oct 12 01:12 output.list
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas       620 Oct 12 01:12 runtime_log
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas   3471360 Oct 12 01:12 result.tar.gz
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 01:12 runtime_log.err
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas       665 Oct 12 01:12 NksLDmyEqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHkgNDmanhXan.diag
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas        29 Oct 12 01:39 wrapper_checkpoint.txt
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 01:39 init_data.xml
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 01:39 boinc_mmap_file
[2025-10-12 01:39:23] -rw-r--r--. 1 boincer umatlas     21167 Oct 12 01:39 stderr.txt
[2025-10-12 01:39:23] HITS file was successfully produced:
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas 190563225 Oct 12 01:03 shared/HITS.pool.root.1
[2025-10-12 01:39:23]  *** Contents of shared directory: ***
[2025-10-12 01:39:23] total 404420
[2025-10-12 01:39:23] -rw-r--r--. 2 boincer umatlas 219484956 Oct 11 16:36 ATLAS.root_0
[2025-10-12 01:39:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:36 start_atlas.sh
[2025-10-12 01:39:23] -rw-r--r--. 2 boincer umatlas    569684 Oct 11 16:36 input.tar.gz
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas 190563225 Oct 12 01:03 HITS.pool.root.1
[2025-10-12 01:39:23] -rw-------. 1 boincer umatlas   3471360 Oct 12 01:12 result.tar.gz
01:39:25 (3478304): run_atlas exited; CPU time 121679.273089
01:39:25 (3478304): called boinc_finish(0)

</stderr_txt>
]]>

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