Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:24:28 (9083): wrapper (7.7.26015): starting
16:24:28 (9083): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:24:28] Arguments: --nthreads 8
[2025-10-11 16:24:28] Threads: 8
[2025-10-11 16:24:28] Checking for CVMFS
[2025-10-11 16:24:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:24:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:24:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:24:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:24:28] 2.11.2.0 2840 1871 69268 151595 3 57 10693450 20275201 1 130560 0 1299340 99.990 65123 36544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 16:24:28] CVMFS is ok
[2025-10-11 16:24:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:24:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:24:28] Further information can be found at the LHC@home message board.
[2025-10-11 16:24:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:24:28] Checking for apptainer binary...
[2025-10-11 16:24:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:24:28] Running /usr/bin/apptainer --version
[2025-10-11 16:24:28] apptainer version 1.3.2-1.el7
[2025-10-11 16:24:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:24:30] c-204-39.aglt2.org
[2025-10-11 16:24:30] apptainer works
[2025-10-11 16:24:30] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:24:30] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:24:30] Starting ATLAS job with PandaID=6838602742
[2025-10-11 16:24:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:25:04]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:25:04] 2025-10-11 22:24:06,888 | INFO     | time since job start (7159s) is within the limit (172800.0s)
[2025-10-11 18:25:04] 2025-10-11 22:24:07,149 | INFO     | monitor loop #532: job 0:6838602742 is in state 'finished'
[2025-10-11 18:25:04] 2025-10-11 22:24:07,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:25:04] 2025-10-11 22:24:07,892 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 18:25:04] 2025-10-11 22:24:07,896 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-11 18:25:04] 2025-10-11 22:24:07,898 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838602742/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:25:04] 2025-10-11 22:24:07,899 | INFO     | extracted standard info from prmon json
[2025-10-11 18:25:04] 2025-10-11 22:24:07,899 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:25:04] 2025-10-11 22:24:07,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:25:04] 2025-10-11 22:24:07,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:25:04] 2025-10-11 22:24:07,900 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:25:04] 2025-10-11 22:24:07,903 | INFO     | fitting pss+swap vs Time
[2025-10-11 18:25:04] 2025-10-11 22:24:07,903 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 18:25:04] 2025-10-11 22:24:07,904 | INFO     | sum of deviations: -6848988500.0
[2025-10-11 18:25:04] 2025-10-11 22:24:07,904 | INFO     | mean x: 1760217856.0
[2025-10-11 18:25:04] 2025-10-11 22:24:07,904 | INFO     | mean y: 2590992.9145299145
[2025-10-11 18:25:04] 2025-10-11 22:24:07,905 | INFO     | -- intersect: 24279230926.162518
[2025-10-11 18:25:04] 2025-10-11 22:24:07,905 | INFO     | intersect: 24279230926.162518
[2025-10-11 18:25:04] 2025-10-11 22:24:07,905 | INFO     | chi2: 1.6187485927146923
[2025-10-11 18:25:04] 2025-10-11 22:24:07,905 | INFO     | sum of square deviations: 435610028.0
[2025-10-11 18:25:04] 2025-10-11 22:24:07,906 | INFO     | sum of deviations: -5764069065.500003
[2025-10-11 18:25:04] 2025-10-11 22:24:07,906 | INFO     | mean x: 1760217703.5
[2025-10-11 18:25:04] 2025-10-11 22:24:07,906 | INFO     | mean y: 2593708.1160714286
[2025-10-11 18:25:04] 2025-10-11 22:24:07,906 | INFO     | -- intersect: 23294106210.41734
[2025-10-11 18:25:04] 2025-10-11 22:24:07,906 | INFO     | intersect: 23294106210.41734
[2025-10-11 18:25:04] 2025-10-11 22:24:07,907 | INFO     | chi2: 1.6199635246737916
[2025-10-11 18:25:04] 2025-10-11 22:24:07,907 | INFO     | current chi2=1.6199635246737916 (change=-0.0750537770081885 %)
[2025-10-11 18:25:04] 2025-10-11 22:24:07,907 | INFO     | right removable region: 111
[2025-10-11 18:25:04] 2025-10-11 22:24:07,907 | INFO     | sum of square deviations: 435610028.0
[2025-10-11 18:25:04] 2025-10-11 22:24:07,908 | INFO     | sum of deviations: -25126480170.999992
[2025-10-11 18:25:04] 2025-10-11 22:24:07,908 | INFO     | mean x: 1760218008.5
[2025-10-11 18:25:04] 2025-10-11 22:24:07,908 | INFO     | mean y: 2635834.0535714286
[2025-10-11 18:25:04] 2025-10-11 22:24:07,908 | INFO     | -- intersect: 101534005739.09245
[2025-10-11 18:25:04] 2025-10-11 22:24:07,908 | INFO     | intersect: 101534005739.09245
[2025-10-11 18:25:04] 2025-10-11 22:24:07,908 | INFO     | chi2: 0.09877159323265873
[2025-10-11 18:25:04] 2025-10-11 22:24:07,909 | INFO     | current chi2=0.09877159323265873 (change=93.89827465011008 %)
[2025-10-11 18:25:04] 2025-10-11 22:24:07,909 | INFO     | sum of square deviations: 379832238.0
[2025-10-11 18:25:04] 2025-10-11 22:24:07,909 | INFO     | sum of deviations: -23129904481.999996
[2025-10-11 18:25:04] 2025-10-11 22:24:07,909 | INFO     | mean x: 1760218161.0
[2025-10-11 18:25:04] 2025-10-11 22:24:07,910 | INFO     | mean y: 2630347.3271028036
[2025-10-11 18:25:04] 2025-10-11 22:24:07,910 | INFO     | -- intersect: 107191209562.6903
[2025-10-11 18:25:04] 2025-10-11 22:24:07,910 | INFO     | intersect: 107191209562.6903
[2025-10-11 18:25:04] 2025-10-11 22:24:07,910 | INFO     | chi2: 0.09476585947826098
[2025-10-11 18:25:04] 2025-10-11 22:24:07,910 | INFO     | current chi2=0.09476585947826098 (change=4.055552434961895 %)
[2025-10-11 18:25:04] 2025-10-11 22:24:07,910 | INFO     | left removable region: 20
[2025-10-11 18:25:04] 2025-10-11 22:24:07,911 | INFO     | sum of square deviations: 233641590.0
[2025-10-11 18:25:04] 2025-10-11 22:24:07,911 | INFO     | sum of deviations: -16197039762.000002
[2025-10-11 18:25:04] 2025-10-11 22:24:07,911 | INFO     | mean x: 1760218283.0
[2025-10-11 18:25:04] 2025-10-11 22:24:07,911 | INFO     | mean y: 2618639.032967033
[2025-10-11 18:25:04] 2025-10-11 22:24:07,911 | INFO     | -- intersect: 122028519590.7872
[2025-10-11 18:25:04] 2025-10-11 22:24:07,912 | INFO     | intersect: 122028519590.7872
[2025-10-11 18:25:04] 2025-10-11 22:24:07,912 | INFO     | chi2: 0.08522617992858544
[2025-10-11 18:25:04] 2025-10-11 22:24:07,912 | INFO     | -- intersect: 122028519590.7872
[2025-10-11 18:25:04] 2025-10-11 22:24:07,912 | INFO     | current memory leak: -69.32 B/s (using 91 data points, chi2=0.09)
[2025-10-11 18:25:04] 2025-10-11 22:24:07,912 | INFO     | could have reported an average CPU frequency of 1974 MHz (7 samples)
[2025-10-11 18:25:04] 2025-10-11 22:24:07,913 | INFO     | ..............................
[2025-10-11 18:25:04] 2025-10-11 22:24:07,913 | INFO     | . Timing measurements:
[2025-10-11 18:25:04] 2025-10-11 22:24:07,913 | INFO     | . get job = 0 s
[2025-10-11 18:25:04] 2025-10-11 22:24:07,913 | INFO     | . initial setup = 2 s
[2025-10-11 18:25:04] 2025-10-11 22:24:07,913 | INFO     | . payload setup = 8 s
[2025-10-11 18:25:04] 2025-10-11 22:24:07,913 | INFO     | . stage-in = 0 s
[2025-10-11 18:25:04] 2025-10-11 22:24:07,913 | INFO     | . payload execution = 7121 s
[2025-10-11 18:25:04] 2025-10-11 22:24:07,913 | INFO     | . stage-out = 0 s
[2025-10-11 18:25:04] 2025-10-11 22:24:07,913 | INFO     | . log creation = 0 s
[2025-10-11 18:25:04] 2025-10-11 22:24:07,914 | INFO     | ..............................
[2025-10-11 18:25:04] 2025-10-11 22:24:08,003 | INFO     | 
[2025-10-11 18:25:04] 2025-10-11 22:24:08,003 | INFO     | job summary report
[2025-10-11 18:25:04] 2025-10-11 22:24:08,003 | INFO     | --------------------------------------------------
[2025-10-11 18:25:04] 2025-10-11 22:24:08,004 | INFO     | PanDA job id: 6838602742
[2025-10-11 18:25:04] 2025-10-11 22:24:08,004 | INFO     | task id: 46676269
[2025-10-11 18:25:04] 2025-10-11 22:24:08,004 | INFO     | errors: (none)
[2025-10-11 18:25:04] 2025-10-11 22:24:08,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:25:04] 2025-10-11 22:24:08,004 | INFO     | pilot state: finished 
[2025-10-11 18:25:04] 2025-10-11 22:24:08,005 | INFO     | transexitcode: 0
[2025-10-11 18:25:04] 2025-10-11 22:24:08,005 | INFO     | exeerrorcode: 0
[2025-10-11 18:25:04] 2025-10-11 22:24:08,005 | INFO     | exeerrordiag: 
[2025-10-11 18:25:04] 2025-10-11 22:24:08,005 | INFO     | exitcode: 0
[2025-10-11 18:25:04] 2025-10-11 22:24:08,005 | INFO     | exitmsg: OK
[2025-10-11 18:25:04] 2025-10-11 22:24:08,005 | INFO     | cpuconsumptiontime: 53676 s
[2025-10-11 18:25:04] 2025-10-11 22:24:08,005 | INFO     | nevents: 400
[2025-10-11 18:25:04] 2025-10-11 22:24:08,006 | INFO     | neventsw: 0
[2025-10-11 18:25:04] 2025-10-11 22:24:08,006 | INFO     | pid: 19234
[2025-10-11 18:25:04] 2025-10-11 22:24:08,006 | INFO     | pgrp: 19234
[2025-10-11 18:25:04] 2025-10-11 22:24:08,006 | INFO     | corecount: 8
[2025-10-11 18:25:04] 2025-10-11 22:24:08,006 | INFO     | event service: False
[2025-10-11 18:25:04] 2025-10-11 22:24:08,006 | INFO     | sizes: {0: 2348634, 1: 2348833, 6: 2349095, 11: 2349123, 7133: 2376376, 7134: 2385374, 7135: 2385558, 7144: 2385752}
[2025-10-11 18:25:04] 2025-10-11 22:24:08,006 | INFO     | --------------------------------------------------
[2025-10-11 18:25:04] 2025-10-11 22:24:08,006 | INFO     | 
[2025-10-11 18:25:04] 2025-10-11 22:24:08,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 18:25:04] 2025-10-11 22:24:08,034 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:25:04] 2025-10-11 22:24:08,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:25:04] 2025-10-11 22:24:08,038 | INFO     | job 6838602742 has completed (purged errors)
[2025-10-11 18:25:04] 2025-10-11 22:24:08,038 | INFO     | overall cleanup function is called
[2025-10-11 18:25:04] 2025-10-11 22:24:09,047 | INFO     | --- collectZombieJob: --- 10, [19234]
[2025-10-11 18:25:04] 2025-10-11 22:24:09,047 | INFO     | zombie collector waiting for pid 19234
[2025-10-11 18:25:04] 2025-10-11 22:24:09,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:25:04] 2025-10-11 22:24:09,047 | INFO     | collected zombie processes
[2025-10-11 18:25:04] 2025-10-11 22:24:09,047 | INFO     | will attempt to kill all subprocesses of pid=19234
[2025-10-11 18:25:04] 2025-10-11 22:24:09,136 | INFO     | process IDs to be killed: [19234] (in reverse order)
[2025-10-11 18:25:04] 2025-10-11 22:24:09,194 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:25:04] 2025-10-11 22:24:09,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:25:04] 2025-10-11 22:24:09,198 | INFO     | did not find any defunct processes belonging to 19234
[2025-10-11 18:25:04] 2025-10-11 22:24:09,200 | INFO     | did not find any defunct processes belonging to 19234
[2025-10-11 18:25:04] 2025-10-11 22:24:09,201 | INFO     | ready for new job
[2025-10-11 18:25:04] 2025-10-11 22:24:09,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:25:04] 2025-10-11 22:24:09,203 | INFO     | ***************************************
[2025-10-11 18:25:04] 2025-10-11 22:24:09,203 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:25:04] 2025-10-11 22:24:09,203 | INFO     | ***************************************
[2025-10-11 18:25:04] 2025-10-11 22:24:09,203 | INFO     | 
[2025-10-11 18:25:04] 2025-10-11 22:24:09,204 | INFO     | architecture information:
[2025-10-11 18:25:04] 2025-10-11 22:24:09,205 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:25:04] 2025-10-11 22:24:09,223 | INFO     | cat /etc/os-release:
[2025-10-11 18:25:04] NAME="CentOS Linux"
[2025-10-11 18:25:04] VERSION="7 (Core)"
[2025-10-11 18:25:04] ID="centos"
[2025-10-11 18:25:04] ID_LIKE="rhel fedora"
[2025-10-11 18:25:04] VERSION_ID="7"
[2025-10-11 18:25:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:25:04] ANSI_COLOR="0;31"
[2025-10-11 18:25:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:25:04] HOME_URL="https://www.centos.org/"
[2025-10-11 18:25:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:25:04] 
[2025-10-11 18:25:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:25:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:25:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:25:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:25:04] 
[2025-10-11 18:25:04] 2025-10-11 22:24:09,224 | INFO     | ***************************************
[2025-10-11 18:25:04] 2025-10-11 22:24:09,727 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 18:25:04] 2025-10-11 22:24:09,747 | INFO     | sufficient remaining disk space (18546163712 B)
[2025-10-11 18:25:04] 2025-10-11 22:24:09,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:25:04] 2025-10-11 22:24:09,748 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:25:04] 2025-10-11 22:24:09,748 | INFO     | update_server=False
[2025-10-11 18:25:04] 2025-10-11 22:24:09,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:25:04] 2025-10-11 22:24:09,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:25:04] 2025-10-11 22:24:09,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:25:04] 2025-10-11 22:24:09,783 | INFO     | all payload control threads have been joined
[2025-10-11 18:25:04] 2025-10-11 22:24:09,921 | INFO     | all job control threads have been joined
[2025-10-11 18:25:04] 2025-10-11 22:24:10,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:25:04] 2025-10-11 22:24:10,659 | INFO     | aborting loop
[2025-10-11 18:25:04] 2025-10-11 22:24:10,751 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:10,752 | INFO     | all data control threads have been joined
[2025-10-11 18:25:04] 2025-10-11 22:24:10,754 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:10,787 | INFO     | [payload] control thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:10,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:25:04] 2025-10-11 22:24:10,922 | INFO     | [job] control thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:11,051 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:11,370 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:11,507 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:11,664 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:11,757 | INFO     | [data] control thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:11,789 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:11,792 | INFO     | [job] validate thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:11,796 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:12,150 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:12,308 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:12,887 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:13,754 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:25:04] 2025-10-11 22:24:40,099 | INFO     | PID=12752 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 18:25:04] 2025-10-11 22:24:40,100 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:25:04] 2025-10-11 22:24:40,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:25:04] 2025-10-11 22:24:40,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:25:04] 2025-10-11 22:24:45,475 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-11 18:25:04] 2025-10-11 22:24:58,960 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:25:04] 2025-10-11 22:24:59,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632682264384)>', '<ExcThread(monitor, started 139631634921216)>']
[2025-10-11 18:25:04] 2025-10-11 22:24:59,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:25:04] 2025-10-11 22:24:59,192 | INFO     | [monitor] control thread has ended
[2025-10-11 18:25:04] 2025-10-11 22:25:04,182 | INFO     | all workflow threads have been joined
[2025-10-11 18:25:04] 2025-10-11 22:25:04,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:25:04] 2025-10-11 22:25:04,186 | INFO     | traces error code: 0
[2025-10-11 18:25:04] 2025-10-11 22:25:04,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:25:04] 2025-10-11 22:25:04,318 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:25:04] 2025-10-11 22:25:04,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:25:04] 2025-10-11 22:25:04,326 [wrapper] pilotpid: 12752
[2025-10-11 18:25:04] 2025-10-11 22:25:04,330 [wrapper] Pilot exit status: 0
[2025-10-11 18:25:04] 2025-10-11 22:25:04,349 [wrapper] pandaids: 6838602742
[2025-10-11 18:25:04] 2025-10-11 22:25:04,402 [wrapper] cleanup supervisor_pilot 10055 12753
[2025-10-11 18:25:04] 2025-10-11 22:25:04,407 [wrapper] Test setup, not cleaning
[2025-10-11 18:25:04] 2025-10-11 22:25:04,412 [wrapper] apfmon messages muted
[2025-10-11 18:25:04] 2025-10-11 22:25:04,416 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:25:04] 2025-10-11 22:25:04,421 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:25:04]  *** Error codes and diagnostics ***
[2025-10-11 18:25:04]     "exeErrorCode": 0,
[2025-10-11 18:25:04]     "exeErrorDiag": "",
[2025-10-11 18:25:04]     "pilotErrorCode": 0,
[2025-10-11 18:25:04]     "pilotErrorDiag": "",
[2025-10-11 18:25:04]  *** Listing of results directory ***
[2025-10-11 18:25:04] total 414476
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 10:55 queuedata.json
[2025-10-11 18:25:04] -rwx------ 1 boincer umatlas     36292 Oct 11 10:59 runpilot2-wrapper.sh
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas       100 Oct 11 16:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:25:04] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 16:24 run_atlas
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas       105 Oct 11 16:24 job.xml
[2025-10-11 18:25:04] -rw-r--r-- 2 boincer umatlas 223099859 Oct 11 16:24 EVNT.46676267._000753.pool.root.1
[2025-10-11 18:25:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:24 start_atlas.sh
[2025-10-11 18:25:04] drwxrwx--x 2 boincer umatlas      4096 Oct 11 16:24 shared
[2025-10-11 18:25:04] -rw-r--r-- 2 boincer umatlas    569687 Oct 11 16:24 input.tar.gz
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas         0 Oct 11 16:24 boinc_lockfile
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 16:24 pandaJob.out
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas    975528 Oct 11 16:24 agis_schedconf.cvmfs.json
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas   1560580 Oct 11 16:24 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:25:04] drwx------ 5 boincer umatlas      4096 Oct 11 16:24 pilot3
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 18:19 init_data.xml
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas 194673276 Oct 11 18:23 HITS.46676269._059681.pool.root.1
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas       529 Oct 11 18:23 boinc_task_state.xml
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas      1062 Oct 11 18:23 memory_monitor_summary.json
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas    363917 Oct 11 18:23 log.46676269._059681.job.log.tgz.1
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas      7852 Oct 11 18:24 heartbeat.json
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas        95 Oct 11 18:24 pilot_heartbeat.json
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas        27 Oct 11 18:24 wrapper_checkpoint.txt
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 18:24 boinc_mmap_file
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas      4746 Oct 11 18:25 pilotlog.txt
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas   1007741 Oct 11 18:25 log.46676269._059681.job.log.1
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas       357 Oct 11 18:25 output.list
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas       620 Oct 11 18:25 runtime_log
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas   1392640 Oct 11 18:25 result.tar.gz
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 18:25 runtime_log.err
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas       659 Oct 11 18:25 5IXLDmyEqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5jgNDmbSSbDn.diag
[2025-10-11 18:25:04] -rw-r--r-- 1 boincer umatlas     21087 Oct 11 18:25 stderr.txt
[2025-10-11 18:25:04] HITS file was successfully produced:
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas 194673276 Oct 11 18:23 shared/HITS.pool.root.1
[2025-10-11 18:25:04]  *** Contents of shared directory: ***
[2025-10-11 18:25:04] total 409928
[2025-10-11 18:25:04] -rw-r--r-- 2 boincer umatlas 223099859 Oct 11 16:24 ATLAS.root_0
[2025-10-11 18:25:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:24 start_atlas.sh
[2025-10-11 18:25:04] -rw-r--r-- 2 boincer umatlas    569687 Oct 11 16:24 input.tar.gz
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas 194673276 Oct 11 18:23 HITS.pool.root.1
[2025-10-11 18:25:04] -rw------- 1 boincer umatlas   1392640 Oct 11 18:25 result.tar.gz
18:25:06 (9083): run_atlas exited; CPU time 53690.621895
18:25:06 (9083): called boinc_finish(0)

</stderr_txt>
]]>

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