Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:13:20 (2456217): wrapper (7.7.26015): starting
16:13:20 (2456217): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:13:20] Arguments: --nthreads 8
[2025-10-11 16:13:20] Threads: 8
[2025-10-11 16:13:20] Checking for CVMFS
[2025-10-11 16:13:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:13:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:13:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:13:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:13:22] 2.13.2.0 970182 137115 275364 151594 0 483 28613487 32935936 29813 16776704 0 92492887 99.650 87211865 30608 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 16:13:22] CVMFS is ok
[2025-10-11 16:13:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:13:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:13:22] Further information can be found at the LHC@home message board.
[2025-10-11 16:13:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:13:22] Checking for apptainer binary...
[2025-10-11 16:13:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:13:22] Running /usr/bin/apptainer --version
[2025-10-11 16:13:22] apptainer version 1.4.3-1.el9
[2025-10-11 16:13:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:13:23] c-8-37.aglt2.org
[2025-10-11 16:13:23] apptainer works
[2025-10-11 16:13:23] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:13:23] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:13:24] Starting ATLAS job with PandaID=6838603966
[2025-10-11 16:13:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:02:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:02:31] 2025-10-12 13:01:47,036 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.105875
[2025-10-12 09:02:31] 2025-10-12 13:01:47,043 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838603966/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:02:31] 2025-10-12 13:01:47,044 | INFO     | extracted standard info from prmon json
[2025-10-12 09:02:31] 2025-10-12 13:01:47,044 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:02:31] 2025-10-12 13:01:47,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:02:31] 2025-10-12 13:01:47,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:02:31] 2025-10-12 13:01:47,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:02:31] 2025-10-12 13:01:47,124 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:02:31] 2025-10-12 13:01:47,125 | INFO     | sum of square deviations: 298148595614.85736
[2025-10-12 09:02:31] 2025-10-12 13:01:47,177 | INFO     | monitor loop #2708: job 0:6838603966 is in state 'finished'
[2025-10-12 09:02:31] 2025-10-12 13:01:47,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:02:31] 2025-10-12 13:01:47,447 | INFO     | sum of deviations: 163900858990.85718
[2025-10-12 09:02:31] 2025-10-12 13:01:47,447 | INFO     | mean x: 1760243899.857143
[2025-10-12 09:02:31] 2025-10-12 13:01:47,447 | INFO     | mean y: 2114159.3748733536
[2025-10-12 09:02:31] 2025-10-12 13:01:47,448 | INFO     | -- intersect: -965542544.2397494
[2025-10-12 09:02:31] 2025-10-12 13:01:47,448 | INFO     | intersect: -965542544.2397494
[2025-10-12 09:02:31] 2025-10-12 13:01:47,578 | INFO     | chi2: 6.2796565123980255
[2025-10-12 09:02:31] 2025-10-12 13:01:47,580 | INFO     | sum of square deviations: 293640486777.82465
[2025-10-12 09:02:31] 2025-10-12 13:01:47,773 | INFO     | time since job start (60415s) is within the limit (172800.0s)
[2025-10-12 09:02:31] 2025-10-12 13:01:48,089 | INFO     | sum of deviations: 286542859468.6395
[2025-10-12 09:02:31] 2025-10-12 13:01:48,090 | INFO     | mean x: 1760243747.358452
[2025-10-12 09:02:31] 2025-10-12 13:01:48,090 | INFO     | mean y: 2118297.9470468434
[2025-10-12 09:02:31] 2025-10-12 13:01:48,090 | INFO     | -- intersect: -1715578339.4090757
[2025-10-12 09:02:31] 2025-10-12 13:01:48,090 | INFO     | intersect: -1715578339.4090757
[2025-10-12 09:02:31] 2025-10-12 13:01:48,091 | INFO     | chi2: 4.797261884818089
[2025-10-12 09:02:31] 2025-10-12 13:01:48,091 | INFO     | current chi2=4.797261884818089 (change=23.606301151236877 %)
[2025-10-12 09:02:31] 2025-10-12 13:01:48,092 | INFO     | right removable region: 981
[2025-10-12 09:02:31] 2025-10-12 13:01:48,129 | INFO     | sum of square deviations: 293640150728.66486
[2025-10-12 09:02:31] 2025-10-12 13:01:48,320 | INFO     | sum of deviations: -54063671498.844154
[2025-10-12 09:02:31] 2025-10-12 13:01:48,321 | INFO     | mean x: 1760244052.3615072
[2025-10-12 09:02:31] 2025-10-12 13:01:48,321 | INFO     | mean y: 2121526.8136456213
[2025-10-12 09:02:31] 2025-10-12 13:01:48,321 | INFO     | -- intersect: 326209550.7726144
[2025-10-12 09:02:31] 2025-10-12 13:01:48,321 | INFO     | intersect: 326209550.7726144
[2025-10-12 09:02:31] 2025-10-12 13:01:48,327 | INFO     | chi2: 3.712277699957902
[2025-10-12 09:02:31] 2025-10-12 13:01:48,327 | INFO     | current chi2=3.712277699957902 (change=40.8840643970145 %)
[2025-10-12 09:02:31] 2025-10-12 13:01:48,333 | INFO     | sum of square deviations: 289177441020.1658
[2025-10-12 09:02:31] 2025-10-12 13:01:48,383 | INFO     | sum of deviations: -143821080303.05838
[2025-10-12 09:02:31] 2025-10-12 13:01:48,383 | INFO     | mean x: 1760244204.8648925
[2025-10-12 09:02:31] 2025-10-12 13:01:48,383 | INFO     | mean y: 2124592.1586489254
[2025-10-12 09:02:31] 2025-10-12 13:01:48,383 | INFO     | -- intersect: 877574012.5828817
[2025-10-12 09:02:31] 2025-10-12 13:01:48,388 | INFO     | intersect: 877574012.5828817
[2025-10-12 09:02:31] 2025-10-12 13:01:48,389 | INFO     | chi2: 3.27204061786607
[2025-10-12 09:02:31] 2025-10-12 13:01:48,390 | INFO     | current chi2=3.27204061786607 (change=11.858948001029788 %)
[2025-10-12 09:02:31] 2025-10-12 13:01:48,390 | INFO     | left removable region: 20
[2025-10-12 09:02:31] 2025-10-12 13:01:48,395 | INFO     | sum of square deviations: 275201370256.74084
[2025-10-12 09:02:31] 2025-10-12 13:01:48,442 | INFO     | sum of deviations: -98667649965.87288
[2025-10-12 09:02:31] 2025-10-12 13:01:48,442 | INFO     | mean x: 1760244326.8699272
[2025-10-12 09:02:31] 2025-10-12 13:01:48,442 | INFO     | mean y: 2131774.3850156087
[2025-10-12 09:02:31] 2025-10-12 13:01:48,442 | INFO     | -- intersect: 633230271.2274796
[2025-10-12 09:02:31] 2025-10-12 13:01:48,442 | INFO     | intersect: 633230271.2274796
[2025-10-12 09:02:31] 2025-10-12 13:01:48,444 | INFO     | chi2: 1.5241660668273007
[2025-10-12 09:02:31] 2025-10-12 13:01:48,444 | INFO     | -- intersect: 633230271.2274796
[2025-10-12 09:02:31] 2025-10-12 13:01:48,444 | INFO     | current memory leak: -0.36 B/s (using 961 data points, chi2=1.52)
[2025-10-12 09:02:31] 2025-10-12 13:01:48,469 | INFO     | could have reported an average CPU frequency of 2600 MHz (36 samples)
[2025-10-12 09:02:31] 2025-10-12 13:01:48,470 | INFO     | ..............................
[2025-10-12 09:02:31] 2025-10-12 13:01:48,470 | INFO     | . Timing measurements:
[2025-10-12 09:02:31] 2025-10-12 13:01:48,470 | INFO     | . get job = 0 s
[2025-10-12 09:02:31] 2025-10-12 13:01:48,470 | INFO     | . initial setup = 7 s
[2025-10-12 09:02:31] 2025-10-12 13:01:48,470 | INFO     | . payload setup = 35 s
[2025-10-12 09:02:31] 2025-10-12 13:01:48,470 | INFO     | . stage-in = 0 s
[2025-10-12 09:02:31] 2025-10-12 13:01:48,479 | INFO     | . payload execution = 60224 s
[2025-10-12 09:02:31] 2025-10-12 13:01:48,479 | INFO     | . stage-out = 13 s
[2025-10-12 09:02:31] 2025-10-12 13:01:48,479 | INFO     | . log creation = 4 s
[2025-10-12 09:02:31] 2025-10-12 13:01:48,479 | INFO     | ..............................
[2025-10-12 09:02:31] 2025-10-12 13:01:49,891 | INFO     | time since job start (60417s) is within the limit (172800.0s)
[2025-10-12 09:02:31] 2025-10-12 13:01:50,408 | INFO     | 
[2025-10-12 09:02:31] 2025-10-12 13:01:50,408 | INFO     | job summary report
[2025-10-12 09:02:31] 2025-10-12 13:01:50,408 | INFO     | --------------------------------------------------
[2025-10-12 09:02:31] 2025-10-12 13:01:50,408 | INFO     | PanDA job id: 6838603966
[2025-10-12 09:02:31] 2025-10-12 13:01:50,408 | INFO     | task id: 46676269
[2025-10-12 09:02:31] 2025-10-12 13:01:50,408 | INFO     | errors: (none)
[2025-10-12 09:02:31] 2025-10-12 13:01:50,409 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:02:31] 2025-10-12 13:01:50,409 | INFO     | pilot state: finished 
[2025-10-12 09:02:31] 2025-10-12 13:01:50,409 | INFO     | transexitcode: 0
[2025-10-12 09:02:31] 2025-10-12 13:01:50,409 | INFO     | exeerrorcode: 0
[2025-10-12 09:02:31] 2025-10-12 13:01:50,409 | INFO     | exeerrordiag: 
[2025-10-12 09:02:31] 2025-10-12 13:01:50,409 | INFO     | exitcode: 0
[2025-10-12 09:02:31] 2025-10-12 13:01:50,409 | INFO     | exitmsg: OK
[2025-10-12 09:02:31] 2025-10-12 13:01:50,409 | INFO     | cpuconsumptiontime: 52350 s
[2025-10-12 09:02:31] 2025-10-12 13:01:50,409 | INFO     | nevents: 400
[2025-10-12 09:02:31] 2025-10-12 13:01:50,410 | INFO     | neventsw: 0
[2025-10-12 09:02:31] 2025-10-12 13:01:50,410 | INFO     | pid: 2471209
[2025-10-12 09:02:31] 2025-10-12 13:01:50,410 | INFO     | pgrp: 2471209
[2025-10-12 09:02:31] 2025-10-12 13:01:50,418 | INFO     | corecount: 8
[2025-10-12 09:02:31] 2025-10-12 13:01:50,418 | INFO     | event service: False
[2025-10-12 09:02:31] 2025-10-12 13:01:50,418 | INFO     | sizes: {0: 2348629, 1: 2348713, 2: 2348912, 14: 2348912, 25: 2348940, 36: 2348968, 41: 2349386, 47: 2349414, 60264: 2399539, 60266: 2399538, 60280: 2408592, 60281:
[2025-10-12 09:02:31] 2025-10-12 13:01:50,418 | INFO     | --------------------------------------------------
[2025-10-12 09:02:31] 2025-10-12 13:01:50,418 | INFO     | 
[2025-10-12 09:02:31] 2025-10-12 13:01:50,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 09:02:31] 2025-10-12 13:01:50,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,756 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,756 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,758 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,758 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:02:31] 2025-10-12 13:01:50,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,758 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:02:31] 2025-10-12 13:01:50,758 | INFO     | job 6838603966 has completed (purged errors)
[2025-10-12 09:02:31] 2025-10-12 13:01:50,759 | INFO     | overall cleanup function is called
[2025-10-12 09:02:31] 2025-10-12 13:01:51,806 | INFO     | --- collectZombieJob: --- 10, [2471209]
[2025-10-12 09:02:31] 2025-10-12 13:01:51,806 | INFO     | zombie collector waiting for pid 2471209
[2025-10-12 09:02:31] 2025-10-12 13:01:51,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:02:31] 2025-10-12 13:01:51,806 | INFO     | collected zombie processes
[2025-10-12 09:02:31] 2025-10-12 13:01:51,806 | INFO     | will attempt to kill all subprocesses of pid=2471209
[2025-10-12 09:02:31] 2025-10-12 13:01:56,514 | INFO     | process IDs to be killed: [2471209] (in reverse order)
[2025-10-12 09:02:31] 2025-10-12 13:01:57,075 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:02:31] 2025-10-12 13:01:57,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:02:31] 2025-10-12 13:01:57,192 | INFO     | did not find any defunct processes belonging to 2471209
[2025-10-12 09:02:31] 2025-10-12 13:01:57,547 | INFO     | did not find any defunct processes belonging to 2471209
[2025-10-12 09:02:31] 2025-10-12 13:01:57,739 | INFO     | ready for new job
[2025-10-12 09:02:31] 2025-10-12 13:01:57,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:02:31] 2025-10-12 13:01:57,877 | INFO     | ***************************************
[2025-10-12 09:02:31] 2025-10-12 13:01:57,877 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:02:31] 2025-10-12 13:01:57,878 | INFO     | ***************************************
[2025-10-12 09:02:31] 2025-10-12 13:01:57,878 | INFO     | 
[2025-10-12 09:02:31] 2025-10-12 13:01:57,899 | INFO     | architecture information:
[2025-10-12 09:02:31] 2025-10-12 13:01:57,938 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:02:31] 2025-10-12 13:01:58,343 | INFO     | cat /etc/os-release:
[2025-10-12 09:02:31] NAME="CentOS Linux"
[2025-10-12 09:02:31] VERSION="7 (Core)"
[2025-10-12 09:02:31] ID="centos"
[2025-10-12 09:02:31] ID_LIKE="rhel fedora"
[2025-10-12 09:02:31] VERSION_ID="7"
[2025-10-12 09:02:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:02:31] ANSI_COLOR="0;31"
[2025-10-12 09:02:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:02:31] HOME_URL="https://www.centos.org/"
[2025-10-12 09:02:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:02:31] 
[2025-10-12 09:02:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:02:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:02:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:02:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:02:31] 
[2025-10-12 09:02:31] 2025-10-12 13:01:58,344 | INFO     | ***************************************
[2025-10-12 09:02:31] 2025-10-12 13:01:58,854 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 09:02:31] 2025-10-12 13:01:59,479 | INFO     | sufficient remaining disk space (75102158848 B)
[2025-10-12 09:02:31] 2025-10-12 13:01:59,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:02:31] 2025-10-12 13:01:59,485 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:02:31] 2025-10-12 13:01:59,485 | INFO     | update_server=False
[2025-10-12 09:02:31] 2025-10-12 13:01:59,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:02:31] 2025-10-12 13:01:59,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:02:31] 2025-10-12 13:01:59,489 | INFO     | aborting loop
[2025-10-12 09:02:31] 2025-10-12 13:01:59,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:02:31] 2025-10-12 13:02:00,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:02:31] 2025-10-12 13:02:00,184 | INFO     | all payload control threads have been joined
[2025-10-12 09:02:31] 2025-10-12 13:02:00,380 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:02:31] 2025-10-12 13:02:00,479 | INFO     | all data control threads have been joined
[2025-10-12 09:02:31] 2025-10-12 13:02:00,491 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:00,495 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:00,506 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:00,725 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:00,726 | INFO     | [job] validate thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:00,734 | INFO     | all job control threads have been joined
[2025-10-12 09:02:31] 2025-10-12 13:02:00,773 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:00,838 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:00,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:02:31] 2025-10-12 13:02:01,195 | INFO     | [payload] control thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:01,485 | INFO     | [data] control thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:01,741 | INFO     | [job] control thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:01,842 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:01,842 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:01,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:01,932 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:02,053 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:04,937 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:02:31] 2025-10-12 13:02:07,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638329755456)>', '<ExcThread(monitor, started 140637647116032)>']
[2025-10-12 09:02:31] 2025-10-12 13:02:12,040 | INFO     | all workflow threads have been joined
[2025-10-12 09:02:31] 2025-10-12 13:02:12,040 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:02:31] 2025-10-12 13:02:12,040 | INFO     | traces error code: 0
[2025-10-12 09:02:31] 2025-10-12 13:02:12,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:02:31] 2025-10-12 13:02:29,378 | INFO     | PID=2461462 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:02:31] 2025-10-12 13:02:29,378 | INFO     | .. there are 41 such processes running
[2025-10-12 09:02:31] 2025-10-12 13:02:29,378 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:02:31] 2025-10-12 13:02:29,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:02:31] 2025-10-12 13:02:29,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:02:31] 2025-10-12 13:02:29,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:02:31] 2025-10-12 13:02:29,379 | INFO     | [monitor] control thread has ended
[2025-10-12 09:02:31] 2025-10-12 13:02:29,634 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:02:31] 2025-10-12 13:02:29,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:02:31] 2025-10-12 13:02:29,810 [wrapper] pilotpid: 2461462
[2025-10-12 09:02:31] 2025-10-12 13:02:29,852 [wrapper] Pilot exit status: 0
[2025-10-12 09:02:31] 2025-10-12 13:02:30,151 [wrapper] pandaids: 6838603966
[2025-10-12 09:02:31] 2025-10-12 13:02:30,713 [wrapper] cleanup supervisor_pilot 1552633 2461463
[2025-10-12 09:02:31] 2025-10-12 13:02:30,794 [wrapper] Test setup, not cleaning
[2025-10-12 09:02:31] 2025-10-12 13:02:30,816 [wrapper] apfmon messages muted
[2025-10-12 09:02:31] 2025-10-12 13:02:30,819 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:02:31] 2025-10-12 13:02:30,822 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:02:31]  *** Error codes and diagnostics ***
[2025-10-12 09:02:31]     "exeErrorCode": 0,
[2025-10-12 09:02:31]     "exeErrorDiag": "",
[2025-10-12 09:02:31]     "pilotErrorCode": 0,
[2025-10-12 09:02:31]     "pilotErrorDiag": "",
[2025-10-12 09:02:31]  *** Listing of results directory ***
[2025-10-12 09:02:31] total 422900
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 11:05 pilot3.tar.gz
[2025-10-12 09:02:31] -rwx------. 1 boincer umatlas     36292 Oct 11 11:17 runpilot2-wrapper.sh
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 11:17 queuedata.json
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:02:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:13 run_atlas
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:13 job.xml
[2025-10-12 09:02:31] -rw-r--r--. 2 boincer umatlas 220635219 Oct 11 16:13 EVNT.46676267._002415.pool.root.1
[2025-10-12 09:02:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:13 start_atlas.sh
[2025-10-12 09:02:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:13 shared
[2025-10-12 09:02:31] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 16:13 input.tar.gz
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:13 boinc_lockfile
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 16:13 pandaJob.out
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas    975528 Oct 11 16:14 agis_schedconf.cvmfs.json
[2025-10-12 09:02:31] drwx------. 5 boincer umatlas      4096 Oct 11 16:14 pilot3
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 08:55 init_data.xml
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas 194140566 Oct 12 08:58 HITS.46676269._060173.pool.root.1
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas       531 Oct 12 08:58 boinc_task_state.xml
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas      1057 Oct 12 09:00 memory_monitor_summary.json
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas    965803 Oct 12 09:00 log.46676269._060173.job.log.tgz.1
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas      7827 Oct 12 09:01 heartbeat.json
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas        95 Oct 12 09:01 pilot_heartbeat.json
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas       823 Oct 12 09:02 pilotlog.txt
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas   6221764 Oct 12 09:02 log.46676269._060173.job.log.1
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:02 boinc_mmap_file
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas       357 Oct 12 09:02 output.list
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:02 runtime_log
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas   7208960 Oct 12 09:02 result.tar.gz
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 09:02 runtime_log.err
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas       656 Oct 12 09:02 L19KDmwWqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCngNDmhmqvJm.diag
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas     21267 Oct 12 09:02 stderr.txt
[2025-10-12 09:02:31] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:02 wrapper_checkpoint.txt
[2025-10-12 09:02:31] HITS file was successfully produced:
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas 194140566 Oct 12 08:58 shared/HITS.pool.root.1
[2025-10-12 09:02:31]  *** Contents of shared directory: ***
[2025-10-12 09:02:31] total 412680
[2025-10-12 09:02:31] -rw-r--r--. 2 boincer umatlas 220635219 Oct 11 16:13 ATLAS.root_0
[2025-10-12 09:02:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:13 start_atlas.sh
[2025-10-12 09:02:31] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 16:13 input.tar.gz
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas 194140566 Oct 12 08:58 HITS.pool.root.1
[2025-10-12 09:02:31] -rw-------. 1 boincer umatlas   7208960 Oct 12 09:02 result.tar.gz
09:02:33 (2456217): run_atlas exited; CPU time 54764.738671
09:02:33 (2456217): called boinc_finish(0)

</stderr_txt>
]]>

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