Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 01:42:29 (19932): vboxwrapper version 26210
2025-10-12 01:42:29 (19932): BOINC client version: 7.22.2
2025-10-12 01:42:30 (19932): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-12 01:42:31 (19932): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 01:42:31 (19932): Create VM. (boinc_f1c3a2cefffd3e21, slot#0)
2025-10-12 01:42:32 (19932): Setting Memory Size for VM. (4700MB)
2025-10-12 01:42:32 (19932): Setting CPU Count for VM. (7)
2025-10-12 01:42:32 (19932): Setting Chipset Options for VM.
2025-10-12 01:42:33 (19932): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 01:42:33 (19932): Setting Boot Options for VM.
2025-10-12 01:42:34 (19932): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 01:42:34 (19932): Enabling VM Network Access.
2025-10-12 01:42:34 (19932): Disabling USB Support for VM.
2025-10-12 01:42:35 (19932): Disabling COM Port Support for VM.
2025-10-12 01:42:35 (19932): Disabling LPT Port Support for VM.
2025-10-12 01:42:35 (19932): Disabling Audio Support for VM.
2025-10-12 01:42:36 (19932): Disabling Clipboard Support for VM.
2025-10-12 01:42:36 (19932): Disabling Drag and Drop Support for VM.
2025-10-12 01:42:36 (19932): Adding storage controller(s) to VM.
2025-10-12 01:42:37 (19932): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 01:42:39 (19932): Adding VirtualBox Guest Additions to VM.
2025-10-12 01:42:40 (19932): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 01:42:40 (19932): forwarding host port 63337 to guest port 80
2025-10-12 01:42:40 (19932): Enabling remote desktop for VM.
2025-10-12 01:42:41 (19932): Required extension pack not installed, remote desktop not enabled.
2025-10-12 01:42:41 (19932): Enabling shared directory for VM.
2025-10-12 01:42:41 (19932): Starting VM using VBoxManage interface. (boinc_f1c3a2cefffd3e21, slot#0)
2025-10-12 01:42:53 (19932): Successfully started VM. (PID = '16376')
2025-10-12 01:42:53 (19932): Reporting VM Process ID to BOINC.
2025-10-12 01:42:53 (19932): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-12 01:42:53 (19932): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 01:42:53 (19932): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 01:42:53 (19932): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 01:42:53 (19932): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 01:42:53 (19932): Detected: Web Application Enabled (http://localhost:63337)
2025-10-12 01:42:53 (19932): Preference change detected
2025-10-12 01:42:53 (19932): Setting CPU throttle for VM. (75%)
2025-10-12 01:42:53 (19932): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 01:42:55 (19932): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 01:42:55 (19932): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 01:43:00 (19932): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 01:43:00 (19932): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 01:43:00 (19932): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 01:43:17 (19932): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 01:43:17 (19932): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 01:43:51 (19932): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 01:43:51 (19932): Guest Log: 00:00:00.000372 main     Log opened 2025-10-12T01:43:48.663979000Z
2025-10-12 01:43:51 (19932): Guest Log: 00:00:00.001338 main     OS Product: Linux
2025-10-12 01:43:51 (19932): Guest Log: 00:00:00.002107 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 01:43:51 (19932): Guest Log: 00:00:00.003313 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 01:43:51 (19932): Guest Log: 00:00:00.003447 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 01:43:51 (19932): Guest Log: 00:00:00.003449 main     Process ID: 1321
2025-10-12 01:43:51 (19932): Guest Log: 00:00:00.003450 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 01:43:51 (19932): Guest Log: 00:00:00.007957 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 01:43:51 (19932): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 01:43:51 (19932): Guest Log: [INFO] Mounting shared directory
2025-10-12 01:43:51 (19932): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 01:43:56 (19932): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 01:43:56 (19932): Guest Log: [INFO] Detected branch: prod
2025-10-12 01:43:57 (19932): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 01:43:57 (19932): Guest Log: Copying input files
2025-10-12 01:44:01 (19932): Guest Log: 00:00:10.017705 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 494 984 000ns (GuestNow=1 760 247 840 174 070 000 ns GuestLast=1 760 233 428 679 086 000 ns fSetTimeLastLoop=true )
2025-10-12 01:44:02 (19932): Guest Log: Copied input files into RunAtlas.
2025-10-12 01:44:02 (19932): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 01:44:02 (19932): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 01:44:02 (19932): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 01:44:02 (19932): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 01:44:10 (19932): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 01:44:11 (19932): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 01:44:11 (19932): Guest Log: 2.6.3.0 1601 0 32116 151609 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 01:44:17 (19932): Guest Log: copied the webapp to /var/www
2025-10-12 01:44:17 (19932): Guest Log: ATHENA_PROC_NUMBER=7
2025-10-12 01:44:17 (19932): Guest Log: ATHENA_CORE_NUMBER=7
2025-10-12 01:44:18 (19932): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 01:44:18 (19932): Guest Log:  *** Starting ATLAS job. (PandaID=6837874160 taskID=46676269) ***
2025-10-12 01:56:02 (19932): Guest Log:  *** Job finished ***
2025-10-12 01:56:02 (19932): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:41,290 | INFO     | all workflow threads have been joined
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:41,291 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:41,292 | INFO     | traces error code: 0
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:41,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:59,687 | INFO     | PID=6039 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:59,689 | INFO     | found 0 job(s) in 20 queues
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:59,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:59,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:59,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:55:59,690 | INFO     | [monitor] control thread has ended
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,091 [wrapper] ==== pilot stdout END ====
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,114 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,135 [wrapper] pilotpid: 6039
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,157 [wrapper] Pilot exit status: 0
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,272 [wrapper] pandaids: 6837874160
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,369 [wrapper] cleanup supervisor_pilot  6045 6040
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,389 [wrapper] Test setup, not cleaning
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,407 [wrapper] apfmon messages muted
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,424 [wrapper] ==== wrapper stdout END ====
2025-10-12 01:56:02 (19932): Guest Log: 2025-10-12 05:56:00,443 [wrapper] ==== wrapper stderr END ====
2025-10-12 01:56:02 (19932): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 01:56:02 (19932): Guest Log:     "exeErrorCode": 65,
2025-10-12 01:56:02 (19932): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-12 01:56:02 (19932): Guest Log:     "pilotErrorCode": 1305,
2025-10-12 01:56:02 (19932): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-12 01:56:02 (19932): Guest Log:  *** Listing of results directory ***
2025-10-12 01:56:02 (19932): Guest Log: total 4240
2025-10-12 01:56:02 (19932): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 10 22:56 pilot3.tar.gz
2025-10-12 01:56:02 (19932): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 10 23:07 runpilot2-wrapper.sh
2025-10-12 01:56:02 (19932): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 10 23:07 queuedata.json
2025-10-12 01:56:02 (19932): Guest Log: -rwxr-xr-x. 1 atlas atlas    6103 Oct 12 05:44 init_data.xml
2025-10-12 01:56:02 (19932): Guest Log: -rwxr-xr-x. 1 atlas atlas  569677 Oct 12 05:44 input.tar.gz
2025-10-12 01:56:02 (19932): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 12 05:44 start_atlas.sh
2025-10-12 01:56:02 (19932): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 12 05:44 EVNT.46676267._001885.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 01:56:02 (19932): Guest Log: -rw-r--r--. 1 atlas atlas    2550 Oct 12 05:44 pandaJob.out
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas  975528 Oct 12 05:45 agis_schedconf.cvmfs.json
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas 1560580 Oct 12 05:45 agis_ddmendpoints.agis.ALL.json
2025-10-12 01:56:02 (19932): Guest Log: drwx------. 5 atlas atlas    4096 Oct 12 05:45 pilot3
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas   53434 Oct 12 05:53 log.46676269._046682.job.log.tgz.1
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas    8183 Oct 12 05:55 heartbeat.json
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas      95 Oct 12 05:55 pilot_heartbeat.json
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas     744 Oct 12 05:55 pilotlog.txt
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas  208063 Oct 12 05:56 log.46676269._046682.job.log.1
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas     188 Oct 12 05:56 output.list
2025-10-12 01:56:02 (19932): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 12 05:56 runtime_log
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas  276480 Oct 12 05:56 result.tar.gz
2025-10-12 01:56:02 (19932): Guest Log: -rw-------. 1 atlas atlas     647 Oct 12 05:56 SQ2NDmDObR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTfeNDmQ6KGzn.diag
2025-10-12 01:56:02 (19932): Guest Log: -rw-r--r--. 1 atlas atlas    8492 Oct 12 05:56 runtime_log.err
2025-10-12 01:56:02 (19932): Guest Log: Looking for outputfile HITS.46676269._046682.pool.root.1
2025-10-12 01:56:02 (19932): Guest Log: No HITS file was produced
2025-10-12 01:56:02 (19932): Guest Log: Successfully finished the ATLAS job!
2025-10-12 01:56:02 (19932): Guest Log: Copying the results back to the shared directory!
2025-10-12 01:56:03 (19932): Guest Log:  *** Contents of shared directory: ***
2025-10-12 01:56:03 (19932): Guest Log: total 215528
2025-10-12 01:56:03 (19932): Guest Log: -rwxrwxrwx. 1 root root 219820195 Oct 12 05:42 ATLAS.root_0
2025-10-12 01:56:03 (19932): Guest Log: -rwxrwxrwx. 1 root root      6103 Oct 12 05:42 init_data.xml
2025-10-12 01:56:03 (19932): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct 11 20:22 input.tar.gz
2025-10-12 01:56:03 (19932): Guest Log: -rwxrwxrwx. 1 root root    276480 Oct 12 05:56 result.tar.gz
2025-10-12 01:56:03 (19932): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 20:22 start_atlas.sh
2025-10-12 01:56:03 (19932): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 01:56:03 (19932): VM Completion File Detected.
2025-10-12 01:56:03 (19932): Powering off VM.
2025-10-12 01:56:05 (19932): Successfully stopped VM.
2025-10-12 01:56:05 (19932): Deregistering VM. (boinc_f1c3a2cefffd3e21, slot#0)
2025-10-12 01:56:05 (19932): Removing network bandwidth throttle group from VM.
2025-10-12 01:56:05 (19932): Removing VM from VirtualBox.
2025-10-12 01:56:10 (19932): called boinc_finish(0)

</stderr_txt>
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