Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:30:18 (155807): wrapper (7.7.26015): starting
16:30:18 (155807): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 16:30:18] Arguments: --nthreads 9
[2025-10-11 16:30:18] Threads: 9
[2025-10-11 16:30:18] Checking for CVMFS
[2025-10-11 16:30:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:30:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:30:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:30:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:30:21] 2.13.2.0 5035 111860 405896 151595 1 510 21297563 40960001 13912 16776704 1 189053121 99.671 165726017 37391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 16:30:21] CVMFS is ok
[2025-10-11 16:30:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:30:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:30:21] Further information can be found at the LHC@home message board.
[2025-10-11 16:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:30:21] Checking for apptainer binary...
[2025-10-11 16:30:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:30:21] Running /usr/bin/apptainer --version
[2025-10-11 16:30:21] apptainer version 1.4.3-1.el9
[2025-10-11 16:30:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:30:21] c-206-41.aglt2.org
[2025-10-11 16:30:21] apptainer works
[2025-10-11 16:30:22] Set ATHENA_PROC_NUMBER=9
[2025-10-11 16:30:22] Set ATHENA_CORE_NUMBER=9
[2025-10-11 16:30:22] Starting ATLAS job with PandaID=6838602921
[2025-10-11 16:30:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:55:24]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:55:24] 2025-10-11 23:54:27,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:55:24] 2025-10-11 23:54:27,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:55:24] 2025-10-11 23:54:27,166 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:55:24] 2025-10-11 23:54:27,166 | INFO     | sum of square deviations: 2334582505.673482
[2025-10-11 19:55:24] 2025-10-11 23:54:27,167 | INFO     | sum of deviations: 69481938170.9593
[2025-10-11 19:55:24] 2025-10-11 23:54:27,167 | INFO     | mean x: 1760220830.9591837
[2025-10-11 19:55:24] 2025-10-11 23:54:27,167 | INFO     | mean y: 2480378.9948979593
[2025-10-11 19:55:24] 2025-10-11 23:54:27,168 | INFO     | -- intersect: -52385282592.20856
[2025-10-11 19:55:24] 2025-10-11 23:54:27,168 | INFO     | intersect: -52385282592.20856
[2025-10-11 19:55:24] 2025-10-11 23:54:27,200 | INFO     | chi2: 6.279213624084733
[2025-10-11 19:55:24] 2025-10-11 23:54:27,201 | INFO     | sum of square deviations: 2160424759.455489
[2025-10-11 19:55:24] 2025-10-11 23:54:27,202 | INFO     | sum of deviations: 80831818416.62306
[2025-10-11 19:55:24] 2025-10-11 23:54:27,202 | INFO     | mean x: 1760220678.460733
[2025-10-11 19:55:24] 2025-10-11 23:54:27,202 | INFO     | mean y: 2490075.54973822
[2025-10-11 19:55:24] 2025-10-11 23:54:27,202 | INFO     | -- intersect: -65855780448.24465
[2025-10-11 19:55:24] 2025-10-11 23:54:27,202 | INFO     | intersect: -65855780448.24465
[2025-10-11 19:55:24] 2025-10-11 23:54:27,202 | INFO     | chi2: 5.552591933024524
[2025-10-11 19:55:24] 2025-10-11 23:54:27,202 | INFO     | current chi2=5.552591933024524 (change=11.57185811091309 %)
[2025-10-11 19:55:24] 2025-10-11 23:54:27,203 | INFO     | right removable region: 190
[2025-10-11 19:55:24] 2025-10-11 23:54:27,203 | INFO     | sum of square deviations: 2160393649.5916276
[2025-10-11 19:55:24] 2025-10-11 23:54:27,204 | INFO     | sum of deviations: 2509170686.7225075
[2025-10-11 19:55:24] 2025-10-11 23:54:27,204 | INFO     | mean x: 1760220983.4712043
[2025-10-11 19:55:24] 2025-10-11 23:54:27,233 | INFO     | mean y: 2538948.8586387434
[2025-10-11 19:55:24] 2025-10-11 23:54:27,233 | INFO     | -- intersect: -2041854624.8378413
[2025-10-11 19:55:24] 2025-10-11 23:54:27,233 | INFO     | intersect: -2041854624.8378413
[2025-10-11 19:55:24] 2025-10-11 23:54:27,233 | INFO     | chi2: 1.7384123577751236
[2025-10-11 19:55:24] 2025-10-11 23:54:27,233 | INFO     | current chi2=1.7384123577751236 (change=72.31480784302003 %)
[2025-10-11 19:55:24] 2025-10-11 23:54:27,234 | INFO     | sum of square deviations: 1995100209.913987
[2025-10-11 19:55:24] 2025-10-11 23:54:27,234 | INFO     | sum of deviations: -23521352391.075264
[2025-10-11 19:55:24] 2025-10-11 23:54:27,235 | INFO     | mean x: 1760221135.9784946
[2025-10-11 19:55:24] 2025-10-11 23:54:27,235 | INFO     | mean y: 2562782.2311827955
[2025-10-11 19:55:24] 2025-10-11 23:54:27,235 | INFO     | -- intersect: 20754794384.349026
[2025-10-11 19:55:24] 2025-10-11 23:54:27,235 | INFO     | intersect: 20754794384.349026
[2025-10-11 19:55:24] 2025-10-11 23:54:27,235 | INFO     | chi2: 0.8987390830357185
[2025-10-11 19:55:24] 2025-10-11 23:54:27,235 | INFO     | current chi2=0.8987390830357185 (change=48.3011565687468 %)
[2025-10-11 19:55:24] 2025-10-11 23:54:27,235 | INFO     | sum of square deviations: 1838491519.0828795
[2025-10-11 19:55:24] 2025-10-11 23:54:27,238 | INFO     | sum of deviations: -24611110869.76243
[2025-10-11 19:55:24] 2025-10-11 23:54:27,238 | INFO     | mean x: 1760221288.4696133
[2025-10-11 19:55:24] 2025-10-11 23:54:27,238 | INFO     | mean y: 2563787.6795580112
[2025-10-11 19:55:24] 2025-10-11 23:54:27,239 | INFO     | -- intersect: 23565904078.448017
[2025-10-11 19:55:24] 2025-10-11 23:54:27,239 | INFO     | intersect: 23565904078.448017
[2025-10-11 19:55:24] 2025-10-11 23:54:27,239 | INFO     | chi2: 0.8778197831450029
[2025-10-11 19:55:24] 2025-10-11 23:54:27,239 | INFO     | current chi2=0.8778197831450029 (change=2.3276277048123233 %)
[2025-10-11 19:55:24] 2025-10-11 23:54:27,239 | INFO     | left removable region: 30
[2025-10-11 19:55:24] 2025-10-11 23:54:27,239 | INFO     | sum of square deviations: 1269893067.9000003
[2025-10-11 19:55:24] 2025-10-11 23:54:27,240 | INFO     | sum of deviations: -2761461357.9500012
[2025-10-11 19:55:24] 2025-10-11 23:54:27,240 | INFO     | mean x: 1760221562.975
[2025-10-11 19:55:24] 2025-10-11 23:54:27,240 | INFO     | mean y: 2566102.5125
[2025-10-11 19:55:24] 2025-10-11 23:54:27,240 | INFO     | -- intersect: 3830277230.681747
[2025-10-11 19:55:24] 2025-10-11 23:54:27,240 | INFO     | intersect: 3830277230.681747
[2025-10-11 19:55:24] 2025-10-11 23:54:27,240 | INFO     | chi2: 0.047842183746683135
[2025-10-11 19:55:24] 2025-10-11 23:54:27,241 | INFO     | -- intersect: 3830277230.681747
[2025-10-11 19:55:24] 2025-10-11 23:54:27,241 | INFO     | current memory leak: -2.17 B/s (using 160 data points, chi2=0.05)
[2025-10-11 19:55:24] 2025-10-11 23:54:27,243 | INFO     | could have reported an average CPU frequency of 3178 MHz (10 samples)
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | ..............................
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | . Timing measurements:
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | . get job = 0 s
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | . initial setup = 8 s
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | . payload setup = 69 s
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | . stage-in = 0 s
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | . payload execution = 11970 s
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | . stage-out = 3 s
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | . log creation = 0 s
[2025-10-11 19:55:24] 2025-10-11 23:54:27,244 | INFO     | ..............................
[2025-10-11 19:55:24] 2025-10-11 23:54:27,649 | INFO     | 
[2025-10-11 19:55:24] 2025-10-11 23:54:27,650 | INFO     | job summary report
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | --------------------------------------------------
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | PanDA job id: 6838602921
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | task id: 46676269
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | errors: (none)
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | pilot state: finished 
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | transexitcode: 0
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | exeerrorcode: 0
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | exeerrordiag: 
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | exitcode: 0
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | exitmsg: OK
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | cpuconsumptiontime: 33840 s
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | nevents: 400
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | neventsw: 0
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | pid: 168839
[2025-10-11 19:55:24] 2025-10-11 23:54:27,651 | INFO     | pgrp: 168839
[2025-10-11 19:55:24] 2025-10-11 23:54:27,652 | INFO     | corecount: 9
[2025-10-11 19:55:24] 2025-10-11 23:54:27,652 | INFO     | event service: False
[2025-10-11 19:55:24] 2025-10-11 23:54:27,652 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 34: 2348969, 39: 2349387, 45: 2349415, 12043: 2379373, 12046: 2388371, 12047: 2388427, 12076:
[2025-10-11 19:55:24] 2025-10-11 23:54:27,652 | INFO     | --------------------------------------------------
[2025-10-11 19:55:24] 2025-10-11 23:54:27,652 | INFO     | 
[2025-10-11 19:55:24] 2025-10-11 23:54:27,652 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 19:55:24] 2025-10-11 23:54:27,894 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:55:24] 2025-10-11 23:54:27,895 | INFO     | job 6838602921 has completed (purged errors)
[2025-10-11 19:55:24] 2025-10-11 23:54:27,896 | INFO     | overall cleanup function is called
[2025-10-11 19:55:24] 2025-10-11 23:54:28,963 | INFO     | --- collectZombieJob: --- 10, [168839]
[2025-10-11 19:55:24] 2025-10-11 23:54:28,963 | INFO     | zombie collector waiting for pid 168839
[2025-10-11 19:55:24] 2025-10-11 23:54:28,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:55:24] 2025-10-11 23:54:28,964 | INFO     | collected zombie processes
[2025-10-11 19:55:24] 2025-10-11 23:54:28,964 | INFO     | will attempt to kill all subprocesses of pid=168839
[2025-10-11 19:55:24] 2025-10-11 23:54:30,523 | INFO     | process IDs to be killed: [168839] (in reverse order)
[2025-10-11 19:55:24] 2025-10-11 23:54:30,759 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:55:24] 2025-10-11 23:54:30,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:55:24] 2025-10-11 23:54:30,906 | INFO     | did not find any defunct processes belonging to 168839
[2025-10-11 19:55:24] 2025-10-11 23:54:30,998 | INFO     | did not find any defunct processes belonging to 168839
[2025-10-11 19:55:24] 2025-10-11 23:54:30,998 | INFO     | ready for new job
[2025-10-11 19:55:24] 2025-10-11 23:54:30,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:55:24] 2025-10-11 23:54:31,002 | INFO     | ***************************************
[2025-10-11 19:55:24] 2025-10-11 23:54:31,003 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:55:24] 2025-10-11 23:54:31,003 | INFO     | ***************************************
[2025-10-11 19:55:24] 2025-10-11 23:54:31,003 | INFO     | 
[2025-10-11 19:55:24] 2025-10-11 23:54:31,013 | INFO     | architecture information:
[2025-10-11 19:55:24] 2025-10-11 23:54:31,039 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:55:24] 2025-10-11 23:54:31,194 | INFO     | cat /etc/os-release:
[2025-10-11 19:55:24] NAME="CentOS Linux"
[2025-10-11 19:55:24] VERSION="7 (Core)"
[2025-10-11 19:55:24] ID="centos"
[2025-10-11 19:55:24] ID_LIKE="rhel fedora"
[2025-10-11 19:55:24] VERSION_ID="7"
[2025-10-11 19:55:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:55:24] ANSI_COLOR="0;31"
[2025-10-11 19:55:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:55:24] HOME_URL="https://www.centos.org/"
[2025-10-11 19:55:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:55:24] 
[2025-10-11 19:55:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:55:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:55:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:55:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:55:24] 
[2025-10-11 19:55:24] 2025-10-11 23:54:31,195 | INFO     | ***************************************
[2025-10-11 19:55:24] 2025-10-11 23:54:31,698 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 19:55:24] 2025-10-11 23:54:31,828 | INFO     | sufficient remaining disk space (84856012800 B)
[2025-10-11 19:55:24] 2025-10-11 23:54:31,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:55:24] 2025-10-11 23:54:31,828 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:55:24] 2025-10-11 23:54:31,828 | INFO     | update_server=False
[2025-10-11 19:55:24] 2025-10-11 23:54:31,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:55:24] 2025-10-11 23:54:31,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:55:24] 2025-10-11 23:54:31,829 | INFO     | aborting loop
[2025-10-11 19:55:24] 2025-10-11 23:54:31,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:55:24] 2025-10-11 23:54:31,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:55:24] 2025-10-11 23:54:31,994 | INFO     | all data control threads have been joined
[2025-10-11 19:55:24] 2025-10-11 23:54:32,297 | INFO     | all payload control threads have been joined
[2025-10-11 19:55:24] 2025-10-11 23:54:32,604 | INFO     | all job control threads have been joined
[2025-10-11 19:55:24] 2025-10-11 23:54:32,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:55:24] 2025-10-11 23:54:32,834 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:32,840 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:32,918 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:33,053 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:33,071 | INFO     | [data] control thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:33,303 | INFO     | [payload] control thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:33,610 | INFO     | [job] control thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:33,642 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:33,669 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:33,674 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:33,763 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:33,843 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:34,035 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:34,057 | INFO     | [job] validate thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:34,110 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:35,955 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:55:24] 2025-10-11 23:54:58,831 | INFO     | 12161s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 19:55:24] 2025-10-11 23:55:00,306 | INFO     | PID=159625 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 19:55:24] 2025-10-11 23:55:00,306 | INFO     | .. there are 12 such processes running
[2025-10-11 19:55:24] 2025-10-11 23:55:00,308 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:55:24] 2025-10-11 23:55:00,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:55:24] 2025-10-11 23:55:00,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:55:24] 2025-10-11 23:55:15,999 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:55:24] 2025-10-11 23:55:16,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140231338215232)>', '<ExcThread(monitor, started 140230841575168)>']
[2025-10-11 19:55:24] 2025-10-11 23:55:16,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:55:24] 2025-10-11 23:55:16,424 | INFO     | [monitor] control thread has ended
[2025-10-11 19:55:24] 2025-10-11 23:55:21,354 | INFO     | all workflow threads have been joined
[2025-10-11 19:55:24] 2025-10-11 23:55:21,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:55:24] 2025-10-11 23:55:21,355 | INFO     | traces error code: 0
[2025-10-11 19:55:24] 2025-10-11 23:55:21,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:55:24] 2025-10-11 23:55:22,489 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:55:24] 2025-10-11 23:55:22,497 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:55:24] 2025-10-11 23:55:22,511 [wrapper] pilotpid: 159625
[2025-10-11 19:55:24] 2025-10-11 23:55:22,587 [wrapper] Pilot exit status: 0
[2025-10-11 19:55:24] 2025-10-11 23:55:22,800 [wrapper] pandaids: 6838602921
[2025-10-11 19:55:24] 2025-10-11 23:55:23,339 [wrapper] cleanup supervisor_pilot  518725 159626
[2025-10-11 19:55:24] 2025-10-11 23:55:23,391 [wrapper] Test setup, not cleaning
[2025-10-11 19:55:24] 2025-10-11 23:55:23,453 [wrapper] apfmon messages muted
[2025-10-11 19:55:24] 2025-10-11 23:55:23,511 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:55:24] 2025-10-11 23:55:23,572 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:55:24]  *** Error codes and diagnostics ***
[2025-10-11 19:55:24]     "exeErrorCode": 0,
[2025-10-11 19:55:24]     "exeErrorDiag": "",
[2025-10-11 19:55:24]     "pilotErrorCode": 0,
[2025-10-11 19:55:24]     "pilotErrorDiag": "",
[2025-10-11 19:55:24]  *** Listing of results directory ***
[2025-10-11 19:55:24] total 410704
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 11:00 queuedata.json
[2025-10-11 19:55:24] -rwx------. 1 boincer umatlas     36292 Oct 11 11:01 runpilot2-wrapper.sh
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:55:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:30 run_atlas
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:30 job.xml
[2025-10-11 19:55:24] -rw-r--r--. 2 boincer umatlas 219484956 Oct 11 16:30 EVNT.46676267._002362.pool.root.1
[2025-10-11 19:55:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:30 start_atlas.sh
[2025-10-11 19:55:24] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:30 shared
[2025-10-11 19:55:24] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 16:30 input.tar.gz
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:30 boinc_lockfile
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 16:30 pandaJob.out
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas    975528 Oct 11 16:31 agis_schedconf.cvmfs.json
[2025-10-11 19:55:24] drwx------. 5 boincer umatlas      4096 Oct 11 16:31 pilot3
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas      6899 Oct 11 19:47 init_data.xml
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas 193047201 Oct 11 19:52 HITS.46676269._059778.pool.root.1
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas       530 Oct 11 19:52 boinc_task_state.xml
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas      1036 Oct 11 19:53 memory_monitor_summary.json
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:53 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas    434335 Oct 11 19:53 log.46676269._059778.job.log.tgz.1
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas      7785 Oct 11 19:54 heartbeat.json
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 19:54 boinc_mmap_file
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas        28 Oct 11 19:54 wrapper_checkpoint.txt
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas        95 Oct 11 19:55 pilot_heartbeat.json
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas      4939 Oct 11 19:55 pilotlog.txt
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas   1628495 Oct 11 19:55 log.46676269._059778.job.log.1
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas       357 Oct 11 19:55 output.list
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas       620 Oct 11 19:55 runtime_log
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas   2078720 Oct 11 19:55 result.tar.gz
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas       655 Oct 11 19:55 SrdNDmvGqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfkgNDmJUYZKm.diag
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 19:55 runtime_log.err
[2025-10-11 19:55:24] -rw-r--r--. 1 boincer umatlas     21047 Oct 11 19:55 stderr.txt
[2025-10-11 19:55:24] HITS file was successfully produced:
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas 193047201 Oct 11 19:52 shared/HITS.pool.root.1
[2025-10-11 19:55:24]  *** Contents of shared directory: ***
[2025-10-11 19:55:24] total 405480
[2025-10-11 19:55:24] -rw-r--r--. 2 boincer umatlas 219484956 Oct 11 16:30 ATLAS.root_0
[2025-10-11 19:55:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:30 start_atlas.sh
[2025-10-11 19:55:24] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 16:30 input.tar.gz
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas 193047201 Oct 11 19:52 HITS.pool.root.1
[2025-10-11 19:55:24] -rw-------. 1 boincer umatlas   2078720 Oct 11 19:55 result.tar.gz
19:55:47 (155807): run_atlas exited; CPU time 34012.821048
19:55:47 (155807): called boinc_finish(0)

</stderr_txt>
]]>

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