Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:10:21 (14804): wrapper (7.7.26015): starting
16:10:21 (14804): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:10:21] Arguments: --nthreads 8
[2025-10-11 16:10:21] Threads: 8
[2025-10-11 16:10:21] Checking for CVMFS
[2025-10-11 16:10:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:10:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:10:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:10:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:10:21] 2.11.2.0 2932 200430 119020 151594 1 57 12181485 20275200 1 130560 1 72072826 99.973 10222280 13731 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 16:10:21] CVMFS is ok
[2025-10-11 16:10:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:10:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:10:21] Further information can be found at the LHC@home message board.
[2025-10-11 16:10:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:10:21] Checking for apptainer binary...
[2025-10-11 16:10:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:10:21] Running /usr/bin/apptainer --version
[2025-10-11 16:10:21] apptainer version 1.3.2-1.el7
[2025-10-11 16:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:10:23] c-204-17.aglt2.org
[2025-10-11 16:10:23] apptainer works
[2025-10-11 16:10:23] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:10:23] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:10:23] Starting ATLAS job with PandaID=6838602906
[2025-10-11 16:10:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:17:58]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:17:58] 2025-10-11 22:17:07,703 | INFO     | -- intersect: -53802131533.05678
[2025-10-11 18:17:58] 2025-10-11 22:17:07,703 | INFO     | intersect: -53802131533.05678
[2025-10-11 18:17:58] 2025-10-11 22:17:07,703 | INFO     | chi2: 1.4157576201206943
[2025-10-11 18:17:58] 2025-10-11 22:17:07,704 | INFO     | sum of square deviations: 522502820.0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,704 | INFO     | sum of deviations: 17502028438.999996
[2025-10-11 18:17:58] 2025-10-11 22:17:07,704 | INFO     | mean x: 1760217072.0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,705 | INFO     | mean y: 2473942.4285714286
[2025-10-11 18:17:58] 2025-10-11 22:17:07,705 | INFO     | -- intersect: -58958680091.069855
[2025-10-11 18:17:58] 2025-10-11 22:17:07,705 | INFO     | intersect: -58958680091.069855
[2025-10-11 18:17:58] 2025-10-11 22:17:07,705 | INFO     | chi2: 1.4164441033354482
[2025-10-11 18:17:58] 2025-10-11 22:17:07,705 | INFO     | current chi2=1.4164441033354482 (change=-0.04848875294737451 %)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,705 | INFO     | right removable region: 118
[2025-10-11 18:17:58] 2025-10-11 22:17:07,706 | INFO     | sum of square deviations: 522502820.0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,706 | INFO     | sum of deviations: 622717890.0000012
[2025-10-11 18:17:58] 2025-10-11 22:17:07,706 | INFO     | mean x: 1760217377.0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,707 | INFO     | mean y: 2513187.344537815
[2025-10-11 18:17:58] 2025-10-11 22:17:07,707 | INFO     | -- intersect: -2095310611.8586447
[2025-10-11 18:17:58] 2025-10-11 22:17:07,707 | INFO     | intersect: -2095310611.8586447
[2025-10-11 18:17:58] 2025-10-11 22:17:07,707 | INFO     | chi2: 0.05952511653032334
[2025-10-11 18:17:58] 2025-10-11 22:17:07,707 | INFO     | current chi2=0.05952511653032334 (change=95.79552914394705 %)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,707 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 18:17:58] 2025-10-11 22:17:07,708 | INFO     | sum of deviations: -2800771934.0000005
[2025-10-11 18:17:58] 2025-10-11 22:17:07,708 | INFO     | mean x: 1760217529.5
[2025-10-11 18:17:58] 2025-10-11 22:17:07,708 | INFO     | mean y: 2521296.6666666665
[2025-10-11 18:17:58] 2025-10-11 22:17:07,708 | INFO     | -- intersect: 10734616790.143673
[2025-10-11 18:17:58] 2025-10-11 22:17:07,709 | INFO     | intersect: 10734616790.143673
[2025-10-11 18:17:58] 2025-10-11 22:17:07,709 | INFO     | chi2: 0.0037810963464535016
[2025-10-11 18:17:58] 2025-10-11 22:17:07,709 | INFO     | current chi2=0.0037810963464535016 (change=93.64789761557655 %)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,709 | INFO     | sum of square deviations: 401533110.0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,710 | INFO     | sum of deviations: -3048803302.000001
[2025-10-11 18:17:58] 2025-10-11 22:17:07,710 | INFO     | mean x: 1760217682.0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,710 | INFO     | mean y: 2521942.660550459
[2025-10-11 18:17:58] 2025-10-11 22:17:07,710 | INFO     | -- intersect: 13367689963.600063
[2025-10-11 18:17:58] 2025-10-11 22:17:07,710 | INFO     | intersect: 13367689963.600063
[2025-10-11 18:17:58] 2025-10-11 22:17:07,710 | INFO     | chi2: 0.0026295374394823784
[2025-10-11 18:17:58] 2025-10-11 22:17:07,711 | INFO     | current chi2=0.0026295374394823784 (change=30.455688018932225 %)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,711 | INFO     | sum of square deviations: 348769330.0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,711 | INFO     | sum of deviations: -2823656694.0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,711 | INFO     | mean x: 1760217834.5
[2025-10-11 18:17:58] 2025-10-11 22:17:07,711 | INFO     | mean y: 2521289.846153846
[2025-10-11 18:17:58] 2025-10-11 22:17:07,712 | INFO     | -- intersect: 14253346817.664524
[2025-10-11 18:17:58] 2025-10-11 22:17:07,712 | INFO     | intersect: 14253346817.664524
[2025-10-11 18:17:58] 2025-10-11 22:17:07,712 | INFO     | chi2: 0.002522544160907853
[2025-10-11 18:17:58] 2025-10-11 22:17:07,712 | INFO     | current chi2=0.002522544160907853 (change=4.068901129454428 %)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,712 | INFO     | left removable region: 40
[2025-10-11 18:17:58] 2025-10-11 22:17:07,712 | INFO     | sum of square deviations: 147126479.5
[2025-10-11 18:17:58] 2025-10-11 22:17:07,713 | INFO     | sum of deviations: -1580398980.0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,713 | INFO     | mean x: 1760218261.5
[2025-10-11 18:17:58] 2025-10-11 22:17:07,713 | INFO     | mean y: 2518217.846153846
[2025-10-11 18:17:58] 2025-10-11 22:17:07,713 | INFO     | -- intersect: 18910380041.944057
[2025-10-11 18:17:58] 2025-10-11 22:17:07,713 | INFO     | intersect: 18910380041.944057
[2025-10-11 18:17:58] 2025-10-11 22:17:07,714 | INFO     | chi2: 0.0021975438096511297
[2025-10-11 18:17:58] 2025-10-11 22:17:07,714 | INFO     | -- intersect: 18910380041.944057
[2025-10-11 18:17:58] 2025-10-11 22:17:07,714 | INFO     | current memory leak: -10.74 B/s (using 78 data points, chi2=0.00)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,714 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,714 | INFO     | ..............................
[2025-10-11 18:17:58] 2025-10-11 22:17:07,714 | INFO     | . Timing measurements:
[2025-10-11 18:17:58] 2025-10-11 22:17:07,715 | INFO     | . get job = 0 s
[2025-10-11 18:17:58] 2025-10-11 22:17:07,715 | INFO     | . initial setup = 3 s
[2025-10-11 18:17:58] 2025-10-11 22:17:07,715 | INFO     | . payload setup = 8 s
[2025-10-11 18:17:58] 2025-10-11 22:17:07,715 | INFO     | . stage-in = 0 s
[2025-10-11 18:17:58] 2025-10-11 22:17:07,715 | INFO     | . payload execution = 7549 s
[2025-10-11 18:17:58] 2025-10-11 22:17:07,715 | INFO     | . stage-out = 0 s
[2025-10-11 18:17:58] 2025-10-11 22:17:07,715 | INFO     | . log creation = 0 s
[2025-10-11 18:17:58] 2025-10-11 22:17:07,715 | INFO     | ..............................
[2025-10-11 18:17:58] 2025-10-11 22:17:07,806 | INFO     | 
[2025-10-11 18:17:58] 2025-10-11 22:17:07,806 | INFO     | job summary report
[2025-10-11 18:17:58] 2025-10-11 22:17:07,807 | INFO     | --------------------------------------------------
[2025-10-11 18:17:58] 2025-10-11 22:17:07,807 | INFO     | PanDA job id: 6838602906
[2025-10-11 18:17:58] 2025-10-11 22:17:07,807 | INFO     | task id: 46676269
[2025-10-11 18:17:58] 2025-10-11 22:17:07,807 | INFO     | errors: (none)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,807 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:17:58] 2025-10-11 22:17:07,807 | INFO     | pilot state: finished 
[2025-10-11 18:17:58] 2025-10-11 22:17:07,808 | INFO     | transexitcode: 0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,808 | INFO     | exeerrorcode: 0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,808 | INFO     | exeerrordiag: 
[2025-10-11 18:17:58] 2025-10-11 22:17:07,808 | INFO     | exitcode: 0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,808 | INFO     | exitmsg: OK
[2025-10-11 18:17:58] 2025-10-11 22:17:07,808 | INFO     | cpuconsumptiontime: 56397 s
[2025-10-11 18:17:58] 2025-10-11 22:17:07,809 | INFO     | nevents: 400
[2025-10-11 18:17:58] 2025-10-11 22:17:07,809 | INFO     | neventsw: 0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,809 | INFO     | pid: 26731
[2025-10-11 18:17:58] 2025-10-11 22:17:07,809 | INFO     | pgrp: 26731
[2025-10-11 18:17:58] 2025-10-11 22:17:07,809 | INFO     | corecount: 8
[2025-10-11 18:17:58] 2025-10-11 22:17:07,809 | INFO     | event service: False
[2025-10-11 18:17:58] 2025-10-11 22:17:07,810 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7561: 2376693, 7562: 2385691, 7563: 2385747, 7569: 2386069}
[2025-10-11 18:17:58] 2025-10-11 22:17:07,810 | INFO     | --------------------------------------------------
[2025-10-11 18:17:58] 2025-10-11 22:17:07,810 | INFO     | 
[2025-10-11 18:17:58] 2025-10-11 22:17:07,810 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 18:17:58] 2025-10-11 22:17:07,839 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,839 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,840 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,840 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,842 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,842 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,842 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,842 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,842 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,843 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:17:58] 2025-10-11 22:17:07,843 | INFO     | job 6838602906 has completed (purged errors)
[2025-10-11 18:17:58] 2025-10-11 22:17:07,843 | INFO     | overall cleanup function is called
[2025-10-11 18:17:58] 2025-10-11 22:17:08,852 | INFO     | --- collectZombieJob: --- 10, [26731]
[2025-10-11 18:17:58] 2025-10-11 22:17:08,852 | INFO     | zombie collector waiting for pid 26731
[2025-10-11 18:17:58] 2025-10-11 22:17:08,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:17:58] 2025-10-11 22:17:08,852 | INFO     | collected zombie processes
[2025-10-11 18:17:58] 2025-10-11 22:17:08,853 | INFO     | will attempt to kill all subprocesses of pid=26731
[2025-10-11 18:17:58] 2025-10-11 22:17:08,941 | INFO     | process IDs to be killed: [26731] (in reverse order)
[2025-10-11 18:17:58] 2025-10-11 22:17:09,002 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:17:58] 2025-10-11 22:17:09,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:17:58] 2025-10-11 22:17:09,007 | INFO     | did not find any defunct processes belonging to 26731
[2025-10-11 18:17:58] 2025-10-11 22:17:09,010 | INFO     | did not find any defunct processes belonging to 26731
[2025-10-11 18:17:58] 2025-10-11 22:17:09,010 | INFO     | ready for new job
[2025-10-11 18:17:58] 2025-10-11 22:17:09,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:17:58] 2025-10-11 22:17:09,012 | INFO     | ***************************************
[2025-10-11 18:17:58] 2025-10-11 22:17:09,012 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:17:58] 2025-10-11 22:17:09,012 | INFO     | ***************************************
[2025-10-11 18:17:58] 2025-10-11 22:17:09,012 | INFO     | 
[2025-10-11 18:17:58] 2025-10-11 22:17:09,012 | INFO     | architecture information:
[2025-10-11 18:17:58] 2025-10-11 22:17:09,013 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:17:58] 2025-10-11 22:17:09,032 | INFO     | cat /etc/os-release:
[2025-10-11 18:17:58] NAME="CentOS Linux"
[2025-10-11 18:17:58] VERSION="7 (Core)"
[2025-10-11 18:17:58] ID="centos"
[2025-10-11 18:17:58] ID_LIKE="rhel fedora"
[2025-10-11 18:17:58] VERSION_ID="7"
[2025-10-11 18:17:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:17:58] ANSI_COLOR="0;31"
[2025-10-11 18:17:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:17:58] HOME_URL="https://www.centos.org/"
[2025-10-11 18:17:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:17:58] 
[2025-10-11 18:17:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:17:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:17:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:17:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:17:58] 
[2025-10-11 18:17:58] 2025-10-11 22:17:09,033 | INFO     | ***************************************
[2025-10-11 18:17:58] 2025-10-11 22:17:09,536 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 18:17:58] 2025-10-11 22:17:09,557 | INFO     | sufficient remaining disk space (18543017984 B)
[2025-10-11 18:17:58] 2025-10-11 22:17:09,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:17:58] 2025-10-11 22:17:09,558 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:17:58] 2025-10-11 22:17:09,558 | INFO     | update_server=False
[2025-10-11 18:17:58] 2025-10-11 22:17:09,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:17:58] 2025-10-11 22:17:09,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:17:58] 2025-10-11 22:17:09,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:17:58] 2025-10-11 22:17:09,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:17:58] 2025-10-11 22:17:09,560 | INFO     | aborting loop
[2025-10-11 18:17:58] 2025-10-11 22:17:09,759 | INFO     | all payload control threads have been joined
[2025-10-11 18:17:58] 2025-10-11 22:17:10,018 | INFO     | all job control threads have been joined
[2025-10-11 18:17:58] 2025-10-11 22:17:10,315 | INFO     | all data control threads have been joined
[2025-10-11 18:17:58] 2025-10-11 22:17:10,564 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:10,564 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:10,566 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:10,765 | INFO     | [payload] control thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:11,023 | INFO     | [job] control thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:11,076 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:11,321 | INFO     | [data] control thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:11,371 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:11,491 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:11,500 | INFO     | [job] validate thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:11,502 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:11,565 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:11,993 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:12,107 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:12,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:17:58] 2025-10-11 22:17:16,396 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:20,191 | INFO     | job.realtimelogging is not enabled
[2025-10-11 18:17:58] 2025-10-11 22:17:21,196 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:17:58] 2025-10-11 22:17:40,623 | INFO     | PID=18491 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 18:17:58] 2025-10-11 22:17:40,624 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:17:58] 2025-10-11 22:17:40,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:17:58] 2025-10-11 22:17:40,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:17:58] 2025-10-11 22:17:53,243 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:17:58] 2025-10-11 22:17:53,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345837455168)>', '<ExcThread(monitor, started 140344985360128)>']
[2025-10-11 18:17:58] 2025-10-11 22:17:53,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:17:58] 2025-10-11 22:17:53,681 | INFO     | [monitor] control thread has ended
[2025-10-11 18:17:58] 2025-10-11 22:17:58,528 | INFO     | all workflow threads have been joined
[2025-10-11 18:17:58] 2025-10-11 22:17:58,529 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:17:58] 2025-10-11 22:17:58,529 | INFO     | traces error code: 0
[2025-10-11 18:17:58] 2025-10-11 22:17:58,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:17:58] 2025-10-11 22:17:58,654 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:17:58] 2025-10-11 22:17:58,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:17:58] 2025-10-11 22:17:58,663 [wrapper] pilotpid: 18491
[2025-10-11 18:17:58] 2025-10-11 22:17:58,668 [wrapper] Pilot exit status: 0
[2025-10-11 18:17:58] 2025-10-11 22:17:58,688 [wrapper] pandaids: 6838602906
[2025-10-11 18:17:58] 2025-10-11 22:17:58,745 [wrapper] cleanup supervisor_pilot 26479 18492
[2025-10-11 18:17:58] 2025-10-11 22:17:58,750 [wrapper] Test setup, not cleaning
[2025-10-11 18:17:58] 2025-10-11 22:17:58,755 [wrapper] apfmon messages muted
[2025-10-11 18:17:58] 2025-10-11 22:17:58,760 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:17:58] 2025-10-11 22:17:58,765 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:17:58]  *** Error codes and diagnostics ***
[2025-10-11 18:17:58]     "exeErrorCode": 0,
[2025-10-11 18:17:58]     "exeErrorDiag": "",
[2025-10-11 18:17:58]     "pilotErrorCode": 0,
[2025-10-11 18:17:58]     "pilotErrorDiag": "",
[2025-10-11 18:17:58]  *** Listing of results directory ***
[2025-10-11 18:17:58] total 416272
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 11:00 queuedata.json
[2025-10-11 18:17:58] -rwx------ 1 boincer umatlas     36292 Oct 11 11:01 runpilot2-wrapper.sh
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas       100 Oct 11 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:17:58] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 16:10 run_atlas
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas       105 Oct 11 16:10 job.xml
[2025-10-11 18:17:58] -rw-r--r-- 2 boincer umatlas 221923707 Oct 11 16:10 EVNT.46676267._002416.pool.root.1
[2025-10-11 18:17:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:10 start_atlas.sh
[2025-10-11 18:17:58] drwxrwx--x 2 boincer umatlas      4096 Oct 11 16:10 shared
[2025-10-11 18:17:58] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 16:10 input.tar.gz
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas         0 Oct 11 16:10 boinc_lockfile
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 16:10 pandaJob.out
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas    975512 Oct 11 16:10 agis_schedconf.cvmfs.json
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas   1560580 Oct 11 16:10 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:17:58] drwx------ 5 boincer umatlas      4096 Oct 11 16:10 pilot3
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 18:11 init_data.xml
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas 197562447 Oct 11 18:16 HITS.46676269._059763.pool.root.1
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas       529 Oct 11 18:16 boinc_task_state.xml
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas      1050 Oct 11 18:16 memory_monitor_summary.json
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas    370240 Oct 11 18:17 log.46676269._059763.job.log.tgz.1
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas      7847 Oct 11 18:17 heartbeat.json
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas        27 Oct 11 18:17 wrapper_checkpoint.txt
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 18:17 boinc_mmap_file
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas        95 Oct 11 18:17 pilot_heartbeat.json
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas      4818 Oct 11 18:17 pilotlog.txt
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas   1067782 Oct 11 18:17 log.46676269._059763.job.log.1
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas       357 Oct 11 18:17 output.list
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas       620 Oct 11 18:17 runtime_log
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas   1454080 Oct 11 18:17 result.tar.gz
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 18:17 runtime_log.err
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas       659 Oct 11 18:17 nBMNDmvGqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXkgNDm37zbQn.diag
[2025-10-11 18:17:58] -rw-r--r-- 1 boincer umatlas     20875 Oct 11 18:17 stderr.txt
[2025-10-11 18:17:58] HITS file was successfully produced:
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas 197562447 Oct 11 18:16 shared/HITS.pool.root.1
[2025-10-11 18:17:58]  *** Contents of shared directory: ***
[2025-10-11 18:17:58] total 411660
[2025-10-11 18:17:58] -rw-r--r-- 2 boincer umatlas 221923707 Oct 11 16:10 ATLAS.root_0
[2025-10-11 18:17:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:10 start_atlas.sh
[2025-10-11 18:17:58] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 16:10 input.tar.gz
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas 197562447 Oct 11 18:16 HITS.pool.root.1
[2025-10-11 18:17:58] -rw------- 1 boincer umatlas   1454080 Oct 11 18:17 result.tar.gz
18:18:00 (14804): run_atlas exited; CPU time 56343.858796
18:18:00 (14804): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN