Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:06:10 (26840): wrapper (7.7.26015): starting
16:06:10 (26840): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 16:06:10] Arguments: --nthreads 12
[2025-10-11 16:06:10] Threads: 12
[2025-10-11 16:06:10] Checking for CVMFS
[2025-10-11 16:06:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:06:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:06:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:06:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:06:11] 2.11.2.0 2987 221853 97192 151594 2 57 13477362 20275200 1 130560 1 107455255 99.984 13358651 12208 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 16:06:11] CVMFS is ok
[2025-10-11 16:06:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:06:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:06:11] Further information can be found at the LHC@home message board.
[2025-10-11 16:06:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:06:11] Checking for apptainer binary...
[2025-10-11 16:06:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:06:11] Running /usr/bin/apptainer --version
[2025-10-11 16:06:11] apptainer version 1.3.2-1.el7
[2025-10-11 16:06:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:06:12] c-205-19.aglt2.org
[2025-10-11 16:06:12] apptainer works
[2025-10-11 16:06:12] Set ATHENA_PROC_NUMBER=12
[2025-10-11 16:06:12] Set ATHENA_CORE_NUMBER=12
[2025-10-11 16:06:12] Starting ATLAS job with PandaID=6838366608
[2025-10-11 16:06:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:21:40]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:21:40]  scope=mc23_13p6TeV
[2025-10-11 17:21:40]  status=None
[2025-10-11 17:21:40]  status_code=0
[2025-10-11 17:21:40]  storage_token=
[2025-10-11 17:21:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838366608/log.46676269._057491.job.log.tgz.1
[2025-10-11 17:21:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/17/log.46676269._057491.job.log.tgz.1
[2025-10-11 17:21:40]  workdir=None
[2025-10-11 17:21:40] ]
[2025-10-11 17:21:40] 2025-10-11 21:20:31,713 | INFO     | transferring file log.46676269._057491.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838366608/log.46676269._057491.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 17:21:40] 2025-10-11 21:20:31,713 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838366608/log.46676269._057491.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._057491.job
[2025-10-11 17:21:40] 2025-10-11 21:20:31,735 | INFO     | adding to output.list: log.46676269._057491.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/17/log.46676269._057491.job.log.tg
[2025-10-11 17:21:40] 2025-10-11 21:20:31,736 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 17:21:40] 2025-10-11 21:20:31,737 | INFO     | summary of transferred files:
[2025-10-11 17:21:40] 2025-10-11 21:20:31,737 | INFO     |  -- lfn=log.46676269._057491.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 17:21:40] 2025-10-11 21:20:31,737 | INFO     | stage-out finished correctly
[2025-10-11 17:21:40] 2025-10-11 21:20:32,010 | INFO     | time since job start (4445s) is within the limit (172800.0s)
[2025-10-11 17:21:40] 2025-10-11 21:20:32,064 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 17:21:40] 2025-10-11 21:20:34,016 | INFO     | time since job start (4447s) is within the limit (172800.0s)
[2025-10-11 17:21:40] 2025-10-11 21:20:34,076 | INFO     | job 6838366608 has state=finished
[2025-10-11 17:21:40] 2025-10-11 21:20:34,076 | INFO     | preparing for final server update for job 6838366608 in state='finished'
[2025-10-11 17:21:40] 2025-10-11 21:20:34,077 | INFO     | this job has now completed (state=finished)
[2025-10-11 17:21:40] 2025-10-11 21:20:34,077 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 17:21:40] 2025-10-11 21:20:34,077 | INFO     | log transfer has been attempted: DONE
[2025-10-11 17:21:40] 2025-10-11 21:20:34,077 | INFO     | job 6838366608 has finished - writing final server update
[2025-10-11 17:21:40] 2025-10-11 21:20:34,078 | INFO     | total number of processed events: 400 (read)
[2025-10-11 17:21:40] 2025-10-11 21:20:34,079 | INFO     | executing command: lscpu
[2025-10-11 17:21:40] 2025-10-11 21:20:34,105 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 17:21:40] 2025-10-11 21:20:35,395 | WARNING  | process 4591 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 17:21:40] 2025-10-11 21:20:35,395 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838366608/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:21:40] 2025-10-11 21:20:35,486 | INFO     | number of running child processes to parent process 4591: 1
[2025-10-11 17:21:40] 2025-10-11 21:20:35,486 | INFO     | maximum number of monitored processes: 6
[2025-10-11 17:21:40] 2025-10-11 21:20:36,022 | INFO     | time since job start (4449s) is within the limit (172800.0s)
[2025-10-11 17:21:40] 2025-10-11 21:20:37,989 | INFO     | monitor loop #331: job 0:6838366608 is in state 'finished'
[2025-10-11 17:21:40] 2025-10-11 21:20:37,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:21:40] 2025-10-11 21:20:38,027 | INFO     | time since job start (4451s) is within the limit (172800.0s)
[2025-10-11 17:21:40] 2025-10-11 21:20:38,886 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 17:21:40] 2025-10-11 21:20:38,888 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-10-11 17:21:40] 2025-10-11 21:20:38,890 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838366608/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:21:40] 2025-10-11 21:20:38,890 | INFO     | extracted standard info from prmon json
[2025-10-11 17:21:40] 2025-10-11 21:20:38,891 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:21:40] 2025-10-11 21:20:38,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:21:40] 2025-10-11 21:20:38,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:21:40] 2025-10-11 21:20:38,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:21:40] 2025-10-11 21:20:38,892 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:21:40] 2025-10-11 21:20:38,893 | INFO     | sum of square deviations: 89127252.5
[2025-10-11 17:21:40] 2025-10-11 21:20:38,893 | INFO     | sum of deviations: -1296391032.0000002
[2025-10-11 17:21:40] 2025-10-11 21:20:38,893 | INFO     | mean x: 1760215503.5
[2025-10-11 17:21:40] 2025-10-11 21:20:38,893 | INFO     | mean y: 2687506.8181818184
[2025-10-11 17:21:40] 2025-10-11 21:20:38,893 | INFO     | -- intersect: 25605716088.05673
[2025-10-11 17:21:40] 2025-10-11 21:20:38,894 | INFO     | intersect: 25605716088.05673
[2025-10-11 17:21:40] 2025-10-11 21:20:38,894 | INFO     | chi2: 0.02949074953436156
[2025-10-11 17:21:40] 2025-10-11 21:20:38,894 | INFO     | -- intersect: 25605716088.05673
[2025-10-11 17:21:40] 2025-10-11 21:20:38,894 | INFO     | current memory leak: -14.55 B/s (using 66 data points, chi2=0.03)
[2025-10-11 17:21:40] 2025-10-11 21:20:38,894 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-10-11 17:21:40] 2025-10-11 21:20:38,894 | INFO     | ..............................
[2025-10-11 17:21:40] 2025-10-11 21:20:38,895 | INFO     | . Timing measurements:
[2025-10-11 17:21:40] 2025-10-11 21:20:38,895 | INFO     | . get job = 0 s
[2025-10-11 17:21:40] 2025-10-11 21:20:38,895 | INFO     | . initial setup = 2 s
[2025-10-11 17:21:40] 2025-10-11 21:20:38,895 | INFO     | . payload setup = 7 s
[2025-10-11 17:21:40] 2025-10-11 21:20:38,895 | INFO     | . stage-in = 0 s
[2025-10-11 17:21:40] 2025-10-11 21:20:38,895 | INFO     | . payload execution = 4415 s
[2025-10-11 17:21:40] 2025-10-11 21:20:38,895 | INFO     | . stage-out = 0 s
[2025-10-11 17:21:40] 2025-10-11 21:20:38,895 | INFO     | . log creation = 0 s
[2025-10-11 17:21:40] 2025-10-11 21:20:38,896 | INFO     | ..............................
[2025-10-11 17:21:40] 2025-10-11 21:20:38,978 | INFO     | 
[2025-10-11 17:21:40] 2025-10-11 21:20:38,978 | INFO     | job summary report
[2025-10-11 17:21:40] 2025-10-11 21:20:38,978 | INFO     | --------------------------------------------------
[2025-10-11 17:21:40] 2025-10-11 21:20:38,978 | INFO     | PanDA job id: 6838366608
[2025-10-11 17:21:40] 2025-10-11 21:20:38,979 | INFO     | task id: 46676269
[2025-10-11 17:21:40] 2025-10-11 21:20:38,979 | INFO     | errors: (none)
[2025-10-11 17:21:40] 2025-10-11 21:20:38,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:21:40] 2025-10-11 21:20:38,979 | INFO     | pilot state: finished 
[2025-10-11 17:21:40] 2025-10-11 21:20:38,980 | INFO     | transexitcode: 0
[2025-10-11 17:21:40] 2025-10-11 21:20:38,980 | INFO     | exeerrorcode: 0
[2025-10-11 17:21:40] 2025-10-11 21:20:38,980 | INFO     | exeerrordiag: 
[2025-10-11 17:21:40] 2025-10-11 21:20:38,980 | INFO     | exitcode: 0
[2025-10-11 17:21:40] 2025-10-11 21:20:38,980 | INFO     | exitmsg: OK
[2025-10-11 17:21:40] 2025-10-11 21:20:38,980 | INFO     | cpuconsumptiontime: 47603 s
[2025-10-11 17:21:40] 2025-10-11 21:20:38,980 | INFO     | nevents: 400
[2025-10-11 17:21:40] 2025-10-11 21:20:38,981 | INFO     | neventsw: 0
[2025-10-11 17:21:40] 2025-10-11 21:20:38,981 | INFO     | pid: 4591
[2025-10-11 17:21:40] 2025-10-11 21:20:38,981 | INFO     | pgrp: 4591
[2025-10-11 17:21:40] 2025-10-11 21:20:38,981 | INFO     | corecount: 12
[2025-10-11 17:21:40] 2025-10-11 21:20:38,981 | INFO     | event service: False
[2025-10-11 17:21:40] 2025-10-11 21:20:38,981 | INFO     | sizes: {0: 2348685, 1: 2348884, 6: 2349146, 11: 2349174, 4426: 2375200, 4428: 2384382, 4435: 2384520}
[2025-10-11 17:21:40] 2025-10-11 21:20:38,982 | INFO     | --------------------------------------------------
[2025-10-11 17:21:40] 2025-10-11 21:20:38,982 | INFO     | 
[2025-10-11 17:21:40] 2025-10-11 21:20:38,982 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 17:21:40] 2025-10-11 21:20:39,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,009 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:21:40] 2025-10-11 21:20:39,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,010 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:21:40] 2025-10-11 21:20:39,010 | INFO     | job 6838366608 has completed (purged errors)
[2025-10-11 17:21:40] 2025-10-11 21:20:39,010 | INFO     | overall cleanup function is called
[2025-10-11 17:21:40] 2025-10-11 21:20:40,018 | INFO     | --- collectZombieJob: --- 10, [4591]
[2025-10-11 17:21:40] 2025-10-11 21:20:40,018 | INFO     | zombie collector waiting for pid 4591
[2025-10-11 17:21:40] 2025-10-11 21:20:40,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:21:40] 2025-10-11 21:20:40,019 | INFO     | collected zombie processes
[2025-10-11 17:21:40] 2025-10-11 21:20:40,019 | INFO     | will attempt to kill all subprocesses of pid=4591
[2025-10-11 17:21:40] 2025-10-11 21:20:40,112 | INFO     | process IDs to be killed: [4591] (in reverse order)
[2025-10-11 17:21:40] 2025-10-11 21:20:40,165 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:21:40] 2025-10-11 21:20:40,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:21:40] 2025-10-11 21:20:40,168 | INFO     | did not find any defunct processes belonging to 4591
[2025-10-11 17:21:40] 2025-10-11 21:20:40,170 | INFO     | did not find any defunct processes belonging to 4591
[2025-10-11 17:21:40] 2025-10-11 21:20:40,170 | INFO     | ready for new job
[2025-10-11 17:21:40] 2025-10-11 21:20:40,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:21:40] 2025-10-11 21:20:40,172 | INFO     | ***************************************
[2025-10-11 17:21:40] 2025-10-11 21:20:40,172 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:21:40] 2025-10-11 21:20:40,172 | INFO     | ***************************************
[2025-10-11 17:21:40] 2025-10-11 21:20:40,172 | INFO     | 
[2025-10-11 17:21:40] 2025-10-11 21:20:40,172 | INFO     | architecture information:
[2025-10-11 17:21:40] 2025-10-11 21:20:40,173 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:21:40] 2025-10-11 21:20:40,188 | INFO     | cat /etc/os-release:
[2025-10-11 17:21:40] NAME="CentOS Linux"
[2025-10-11 17:21:40] VERSION="7 (Core)"
[2025-10-11 17:21:40] ID="centos"
[2025-10-11 17:21:40] ID_LIKE="rhel fedora"
[2025-10-11 17:21:40] VERSION_ID="7"
[2025-10-11 17:21:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:21:40] ANSI_COLOR="0;31"
[2025-10-11 17:21:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:21:40] HOME_URL="https://www.centos.org/"
[2025-10-11 17:21:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:21:40] 
[2025-10-11 17:21:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:21:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:21:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:21:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:21:40] 
[2025-10-11 17:21:40] 2025-10-11 21:20:40,188 | INFO     | ***************************************
[2025-10-11 17:21:40] 2025-10-11 21:20:40,691 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 17:21:40] 2025-10-11 21:20:40,709 | INFO     | sufficient remaining disk space (29361176576 B)
[2025-10-11 17:21:40] 2025-10-11 21:20:40,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:21:40] 2025-10-11 21:20:40,709 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:21:40] 2025-10-11 21:20:40,710 | INFO     | update_server=False
[2025-10-11 17:21:40] 2025-10-11 21:20:40,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:21:40] 2025-10-11 21:20:40,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:21:40] 2025-10-11 21:20:40,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:21:40] 2025-10-11 21:20:41,104 | INFO     | all data control threads have been joined
[2025-10-11 17:21:40] 2025-10-11 21:20:41,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:21:40] 2025-10-11 21:20:41,497 | INFO     | aborting loop
[2025-10-11 17:21:40] 2025-10-11 21:20:41,715 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:41,716 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:41,827 | INFO     | all payload control threads have been joined
[2025-10-11 17:21:40] 2025-10-11 21:20:41,842 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:41,973 | INFO     | all job control threads have been joined
[2025-10-11 17:21:40] 2025-10-11 21:20:42,110 | INFO     | [data] control thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,120 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,230 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,499 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,523 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,539 | INFO     | [job] validate thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:21:40] 2025-10-11 21:20:42,716 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,833 | INFO     | [payload] control thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,939 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,979 | INFO     | [job] control thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:42,990 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:46,659 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:20:51,105 | INFO     | job.realtimelogging is not enabled
[2025-10-11 17:21:40] 2025-10-11 21:20:52,110 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:21:40] 2025-10-11 21:21:11,236 | INFO     | PID=30517 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 17:21:40] 2025-10-11 21:21:11,236 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:21:40] 2025-10-11 21:21:11,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:21:40] 2025-10-11 21:21:11,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:21:40] 2025-10-11 21:21:25,113 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-11 17:21:40] 2025-10-11 21:21:34,272 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:21:40] 2025-10-11 21:21:34,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755769890624)>', '<ExcThread(monitor, started 139754779686656)>']
[2025-10-11 17:21:40] 2025-10-11 21:21:35,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:21:40] 2025-10-11 21:21:35,356 | INFO     | [monitor] control thread has ended
[2025-10-11 17:21:40] 2025-10-11 21:21:39,829 | INFO     | all workflow threads have been joined
[2025-10-11 17:21:40] 2025-10-11 21:21:39,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:21:40] 2025-10-11 21:21:39,829 | INFO     | traces error code: 0
[2025-10-11 17:21:40] 2025-10-11 21:21:39,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:21:40] 2025-10-11 21:21:39,908 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:21:40] 2025-10-11 21:21:39,911 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:21:40] 2025-10-11 21:21:39,915 [wrapper] pilotpid: 30517
[2025-10-11 17:21:40] 2025-10-11 21:21:39,918 [wrapper] Pilot exit status: 0
[2025-10-11 17:21:40] 2025-10-11 21:21:39,932 [wrapper] pandaids: 6838366608
[2025-10-11 17:21:40] 2025-10-11 21:21:39,979 [wrapper] cleanup supervisor_pilot  4814 30518
[2025-10-11 17:21:40] 2025-10-11 21:21:39,983 [wrapper] Test setup, not cleaning
[2025-10-11 17:21:40] 2025-10-11 21:21:39,987 [wrapper] apfmon messages muted
[2025-10-11 17:21:40] 2025-10-11 21:21:39,991 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:21:40] 2025-10-11 21:21:39,995 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:21:40]  *** Error codes and diagnostics ***
[2025-10-11 17:21:40]     "exeErrorCode": 0,
[2025-10-11 17:21:40]     "exeErrorDiag": "",
[2025-10-11 17:21:40]     "pilotErrorCode": 0,
[2025-10-11 17:21:40]     "pilotErrorDiag": "",
[2025-10-11 17:21:40]  *** Listing of results directory ***
[2025-10-11 17:21:40] total 415308
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 08:28 queuedata.json
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 08:28 pilot3.tar.gz
[2025-10-11 17:21:40] -rwx------ 1 boincer umatlas     36292 Oct 11 08:28 runpilot2-wrapper.sh
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas       100 Oct 11 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:21:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 16:06 run_atlas
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas       105 Oct 11 16:06 job.xml
[2025-10-11 17:21:40] -rw-r--r-- 2 boincer umatlas 222412506 Oct 11 16:06 EVNT.46676267._002308.pool.root.1
[2025-10-11 17:21:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:06 start_atlas.sh
[2025-10-11 17:21:40] drwxrwx--x 2 boincer umatlas      4096 Oct 11 16:06 shared
[2025-10-11 17:21:40] -rw-r--r-- 2 boincer umatlas    569679 Oct 11 16:06 input.tar.gz
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas         0 Oct 11 16:06 boinc_lockfile
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 16:06 pandaJob.out
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas    975512 Oct 11 16:06 agis_schedconf.cvmfs.json
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas   1560580 Oct 11 16:06 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:21:40] drwx------ 5 boincer umatlas      4096 Oct 11 16:06 pilot3
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 17:11 init_data.xml
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas 196912664 Oct 11 17:20 HITS.46676269._057491.pool.root.1
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas       529 Oct 11 17:20 boinc_task_state.xml
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas      1048 Oct 11 17:20 memory_monitor_summary.json
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas        95 Oct 11 17:20 pilot_heartbeat.json
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas    377207 Oct 11 17:20 log.46676269._057491.job.log.tgz.1
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas      7849 Oct 11 17:20 heartbeat.json
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 17:21 boinc_mmap_file
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas        27 Oct 11 17:21 wrapper_checkpoint.txt
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas      4818 Oct 11 17:21 pilotlog.txt
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas    645981 Oct 11 17:21 log.46676269._057491.job.log.1
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas       357 Oct 11 17:21 output.list
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas       620 Oct 11 17:21 runtime_log
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas   1044480 Oct 11 17:21 result.tar.gz
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 17:21 runtime_log.err
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas       659 Oct 11 17:21 fdQODm4snR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIrRMDmahQJRn.diag
[2025-10-11 17:21:40] -rw-r--r-- 1 boincer umatlas     21872 Oct 11 17:21 stderr.txt
[2025-10-11 17:21:40] HITS file was successfully produced:
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas 196912664 Oct 11 17:20 shared/HITS.pool.root.1
[2025-10-11 17:21:40]  *** Contents of shared directory: ***
[2025-10-11 17:21:40] total 411100
[2025-10-11 17:21:40] -rw-r--r-- 2 boincer umatlas 222412506 Oct 11 16:06 ATLAS.root_0
[2025-10-11 17:21:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 16:06 start_atlas.sh
[2025-10-11 17:21:40] -rw-r--r-- 2 boincer umatlas    569679 Oct 11 16:06 input.tar.gz
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas 196912664 Oct 11 17:20 HITS.pool.root.1
[2025-10-11 17:21:40] -rw------- 1 boincer umatlas   1044480 Oct 11 17:21 result.tar.gz
17:21:41 (26840): run_atlas exited; CPU time 47570.816304
17:21:41 (26840): called boinc_finish(0)

</stderr_txt>
]]>

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