Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:32:08 (3686445): wrapper (7.7.26015): starting
15:32:08 (3686445): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 15:32:08] Arguments: --nthreads 4
[2025-10-12 15:32:08] Threads: 4
[2025-10-12 15:32:08] Checking for CVMFS
[2025-10-12 15:32:08] No cvmfs_config command found, will try listing directly
[2025-10-12 15:32:08] CVMFS is ok
[2025-10-12 15:32:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:32:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:32:08] Further information can be found at the LHC@home message board.
[2025-10-12 15:32:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:32:08] Checking for apptainer binary...
[2025-10-12 15:32:08] which: no apptainer in ((null))
[2025-10-12 15:32:08] apptainer is not installed, using version from CVMFS
[2025-10-12 15:32:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:32:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-12 15:32:08] apptainer works
[2025-10-12 15:32:08] Set ATHENA_PROC_NUMBER=4
[2025-10-12 15:32:08] Set ATHENA_CORE_NUMBER=4
[2025-10-12 15:32:08] Starting ATLAS job with PandaID=6838603097
[2025-10-12 15:32:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:44:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:44:05] 2025-10-12 16:26:46,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:44:05] 2025-10-12 16:26:46,841 | INFO     | time since job start (10466s) is within the limit (172800.0s)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,829 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 18:44:05] 2025-10-12 16:26:48,839 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2709.1679218750005
[2025-10-12 18:44:05] 2025-10-12 16:26:48,847 | INFO     | time since job start (10468s) is within the limit (172800.0s)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,851 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6838603097/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,852 | INFO     | extracted standard info from prmon json
[2025-10-12 18:44:05] 2025-10-12 16:26:48,852 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:44:05] 2025-10-12 16:26:48,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:44:05] 2025-10-12 16:26:48,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:44:05] 2025-10-12 16:26:48,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:44:05] 2025-10-12 16:26:48,856 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:44:05] 2025-10-12 16:26:48,857 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,858 | INFO     | sum of deviations: -513140052.0000116
[2025-10-12 18:44:05] 2025-10-12 16:26:48,858 | INFO     | mean x: 1760281152.0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,858 | INFO     | mean y: 2345041.409356725
[2025-10-12 18:44:05] 2025-10-12 16:26:48,858 | INFO     | -- intersect: 584939098.3383334
[2025-10-12 18:44:05] 2025-10-12 16:26:48,858 | INFO     | intersect: 584939098.3383334
[2025-10-12 18:44:05] 2025-10-12 16:26:48,858 | INFO     | chi2: 1.3982853692431236
[2025-10-12 18:44:05] 2025-10-12 16:26:48,859 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 18:44:05] 2025-10-12 16:26:48,860 | INFO     | sum of deviations: -385944468.49999934
[2025-10-12 18:44:05] 2025-10-12 16:26:48,860 | INFO     | mean x: 1760280999.5
[2025-10-12 18:44:05] 2025-10-12 16:26:48,860 | INFO     | mean y: 2345188.3554216865
[2025-10-12 18:44:05] 2025-10-12 16:26:48,860 | INFO     | -- intersect: 481327962.1685769
[2025-10-12 18:44:05] 2025-10-12 16:26:48,860 | INFO     | intersect: 481327962.1685769
[2025-10-12 18:44:05] 2025-10-12 16:26:48,860 | INFO     | chi2: 1.3985024994617015
[2025-10-12 18:44:05] 2025-10-12 16:26:48,860 | INFO     | current chi2=1.3985024994617015 (change=-0.01552831942276293 %)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,860 | INFO     | right removable region: 165
[2025-10-12 18:44:05] 2025-10-12 16:26:48,861 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 18:44:05] 2025-10-12 16:26:48,861 | INFO     | sum of deviations: -20762173988.0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,862 | INFO     | mean x: 1760281304.5
[2025-10-12 18:44:05] 2025-10-12 16:26:48,862 | INFO     | mean y: 2368028.0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,862 | INFO     | -- intersect: 25769612338.85841
[2025-10-12 18:44:05] 2025-10-12 16:26:48,862 | INFO     | intersect: 25769612338.85841
[2025-10-12 18:44:05] 2025-10-12 16:26:48,862 | INFO     | chi2: 0.08874812869145828
[2025-10-12 18:44:05] 2025-10-12 16:26:48,862 | INFO     | current chi2=0.08874812869145828 (change=93.65307464101576 %)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,862 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,863 | INFO     | sum of deviations: -17344720235.999996
[2025-10-12 18:44:05] 2025-10-12 16:26:48,863 | INFO     | mean x: 1760281457.0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,863 | INFO     | mean y: 2363829.2919254657
[2025-10-12 18:44:05] 2025-10-12 16:26:48,864 | INFO     | -- intersect: 23596827844.05375
[2025-10-12 18:44:05] 2025-10-12 16:26:48,864 | INFO     | intersect: 23596827844.05375
[2025-10-12 18:44:05] 2025-10-12 16:26:48,864 | INFO     | chi2: 0.08492707477685761
[2025-10-12 18:44:05] 2025-10-12 16:26:48,864 | INFO     | current chi2=0.08492707477685761 (change=4.305503643783791 %)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,864 | INFO     | left removable region: 20
[2025-10-12 18:44:05] 2025-10-12 16:26:48,864 | INFO     | sum of square deviations: 945282840.0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,865 | INFO     | sum of deviations: -9029202371.0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,865 | INFO     | mean x: 1760281579.0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,865 | INFO     | mean y: 2353618.496551724
[2025-10-12 18:44:05] 2025-10-12 16:26:48,865 | INFO     | -- intersect: 16816303829.138716
[2025-10-12 18:44:05] 2025-10-12 16:26:48,865 | INFO     | intersect: 16816303829.138716
[2025-10-12 18:44:05] 2025-10-12 16:26:48,866 | INFO     | chi2: 0.06230349936872484
[2025-10-12 18:44:05] 2025-10-12 16:26:48,866 | INFO     | -- intersect: 16816303829.138716
[2025-10-12 18:44:05] 2025-10-12 16:26:48,866 | INFO     | current memory leak: -9.55 B/s (using 145 data points, chi2=0.06)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,866 | INFO     | could have reported an average CPU frequency of 2696 MHz (9 samples)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,866 | INFO     | ..............................
[2025-10-12 18:44:05] 2025-10-12 16:26:48,866 | INFO     | . Timing measurements:
[2025-10-12 18:44:05] 2025-10-12 16:26:48,867 | INFO     | . get job = 0 s
[2025-10-12 18:44:05] 2025-10-12 16:26:48,867 | INFO     | . initial setup = 1 s
[2025-10-12 18:44:05] 2025-10-12 16:26:48,867 | INFO     | . payload setup = 5 s
[2025-10-12 18:44:05] 2025-10-12 16:26:48,867 | INFO     | . stage-in = 0 s
[2025-10-12 18:44:05] 2025-10-12 16:26:48,867 | INFO     | . payload execution = 10434 s
[2025-10-12 18:44:05] 2025-10-12 16:26:48,867 | INFO     | . stage-out = 1 s
[2025-10-12 18:44:05] 2025-10-12 16:26:48,867 | INFO     | . log creation = 0 s
[2025-10-12 18:44:05] 2025-10-12 16:26:48,867 | INFO     | ..............................
[2025-10-12 18:44:05] 2025-10-12 16:26:48,962 | INFO     | 
[2025-10-12 18:44:05] 2025-10-12 16:26:48,962 | INFO     | job summary report
[2025-10-12 18:44:05] 2025-10-12 16:26:48,962 | INFO     | --------------------------------------------------
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | PanDA job id: 6838603097
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | task id: 46676269
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | errors: (none)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | pilot state: finished 
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | transexitcode: 0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | exeerrorcode: 0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | exeerrordiag: 
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | exitcode: 0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | exitmsg: OK
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | cpuconsumptiontime: 40359 s
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | nevents: 400
[2025-10-12 18:44:05] 2025-10-12 16:26:48,963 | INFO     | neventsw: 0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,964 | INFO     | pid: 3697485
[2025-10-12 18:44:05] 2025-10-12 16:26:48,964 | INFO     | pgrp: 3697485
[2025-10-12 18:44:05] 2025-10-12 16:26:48,964 | INFO     | corecount: 4
[2025-10-12 18:44:05] 2025-10-12 16:26:48,964 | INFO     | event service: False
[2025-10-12 18:44:05] 2025-10-12 16:26:48,964 | INFO     | sizes: {0: 2348868, 4: 2349130, 11: 2349158, 10443: 2378020, 10445: 2387040, 10447: 2387096, 10453: 2387482}
[2025-10-12 18:44:05] 2025-10-12 16:26:48,964 | INFO     | --------------------------------------------------
[2025-10-12 18:44:05] 2025-10-12 16:26:48,964 | INFO     | 
[2025-10-12 18:44:05] 2025-10-12 16:26:48,964 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-10-12 18:44:05] 2025-10-12 16:26:48,983 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,984 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,984 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,984 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,985 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:44:05] 2025-10-12 16:26:48,986 | INFO     | job 6838603097 has completed (purged errors)
[2025-10-12 18:44:05] 2025-10-12 16:26:48,986 | INFO     | overall cleanup function is called
[2025-10-12 18:44:05] 2025-10-12 16:26:49,994 | INFO     | --- collectZombieJob: --- 10, [3697485]
[2025-10-12 18:44:05] 2025-10-12 16:26:49,994 | INFO     | zombie collector waiting for pid 3697485
[2025-10-12 18:44:05] 2025-10-12 16:26:49,994 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:44:05] 2025-10-12 16:26:49,994 | INFO     | collected zombie processes
[2025-10-12 18:44:05] 2025-10-12 16:26:49,994 | INFO     | will attempt to kill all subprocesses of pid=3697485
[2025-10-12 18:44:05] 2025-10-12 16:26:50,343 | INFO     | process IDs to be killed: [3697485] (in reverse order)
[2025-10-12 18:44:05] 2025-10-12 16:26:50,446 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:44:05] 2025-10-12 16:26:50,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:44:05] 2025-10-12 16:26:50,458 | INFO     | did not find any defunct processes belonging to 3697485
[2025-10-12 18:44:05] 2025-10-12 16:26:50,468 | INFO     | did not find any defunct processes belonging to 3697485
[2025-10-12 18:44:05] 2025-10-12 16:26:50,469 | INFO     | ready for new job
[2025-10-12 18:44:05] 2025-10-12 16:26:50,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:44:05] 2025-10-12 16:26:50,471 | INFO     | ***************************************
[2025-10-12 18:44:05] 2025-10-12 16:26:50,471 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:44:05] 2025-10-12 16:26:50,471 | INFO     | ***************************************
[2025-10-12 18:44:05] 2025-10-12 16:26:50,471 | INFO     | 
[2025-10-12 18:44:05] 2025-10-12 16:26:50,475 | INFO     | architecture information:
[2025-10-12 18:44:05] 2025-10-12 16:26:50,475 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:44:05] 2025-10-12 16:26:50,489 | INFO     | cat /etc/os-release:
[2025-10-12 18:44:05] NAME="CentOS Linux"
[2025-10-12 18:44:05] VERSION="7 (Core)"
[2025-10-12 18:44:05] ID="centos"
[2025-10-12 18:44:05] ID_LIKE="rhel fedora"
[2025-10-12 18:44:05] VERSION_ID="7"
[2025-10-12 18:44:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:44:05] ANSI_COLOR="0;31"
[2025-10-12 18:44:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:44:05] HOME_URL="https://www.centos.org/"
[2025-10-12 18:44:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:44:05] 
[2025-10-12 18:44:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:44:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:44:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:44:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:44:05] 
[2025-10-12 18:44:05] 2025-10-12 16:26:50,490 | INFO     | ***************************************
[2025-10-12 18:44:05] 2025-10-12 16:26:50,993 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-10-12 18:44:05] 2025-10-12 16:26:51,009 | INFO     | sufficient remaining disk space (696406507520 B)
[2025-10-12 18:44:05] 2025-10-12 16:26:51,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:44:05] 2025-10-12 16:26:51,009 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:44:05] 2025-10-12 16:26:51,009 | INFO     | update_server=False
[2025-10-12 18:44:05] 2025-10-12 16:26:51,009 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:44:05] 2025-10-12 16:26:51,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:44:05] 2025-10-12 16:26:51,010 | INFO     | aborting loop
[2025-10-12 18:44:05] 2025-10-12 16:26:51,061 | INFO     | all job control threads have been joined
[2025-10-12 18:44:05] 2025-10-12 16:26:51,347 | INFO     | all data control threads have been joined
[2025-10-12 18:44:05] 2025-10-12 16:26:51,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:44:05] 2025-10-12 16:26:51,956 | INFO     | all payload control threads have been joined
[2025-10-12 18:44:05] 2025-10-12 16:26:52,015 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,015 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,066 | INFO     | [job] control thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,280 | INFO     | [job] validate thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,305 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,351 | INFO     | [data] control thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,555 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,558 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,739 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:52,962 | INFO     | [payload] control thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:53,208 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:53,463 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:53,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:44:05] 2025-10-12 16:26:53,759 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:53,968 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:44:05] 2025-10-12 16:26:54,970 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:26:57,629 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:44:05] 2025-10-12 16:27:22,334 | INFO     | PID=3690472 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:44:05] 2025-10-12 16:27:22,335 | INFO     | .. there are 5 such processes running
[2025-10-12 18:44:05] 2025-10-12 16:27:22,335 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:44:05] 2025-10-12 16:27:22,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:44:05] 2025-10-12 16:27:22,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:44:05] 2025-10-12 16:27:35,905 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:44:05] 2025-10-12 16:27:36,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23263920461632)>', '<ExcThread(monitor, started 23263478523648)>']
[2025-10-12 18:44:05] 2025-10-12 16:27:37,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:44:05] 2025-10-12 16:27:37,409 | INFO     | [monitor] control thread has ended
[2025-10-12 18:44:05] 2025-10-12 16:27:41,553 | INFO     | all workflow threads have been joined
[2025-10-12 18:44:05] 2025-10-12 16:27:41,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:44:05] 2025-10-12 16:27:41,554 | INFO     | traces error code: 0
[2025-10-12 18:44:05] 2025-10-12 16:27:41,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:44:05] 2025-10-12 16:27:41,733 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:44:05] 2025-10-12 16:27:41,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:44:05] 2025-10-12 16:27:41,738 [wrapper] pilotpid: 3690472
[2025-10-12 18:44:05] 2025-10-12 16:27:41,741 [wrapper] Pilot exit status: 0
[2025-10-12 18:44:05] 2025-10-12 16:27:41,751 [wrapper] pandaids: 6838603097
[2025-10-12 18:44:05] 2025-10-12 16:27:41,827 [wrapper] cleanup supervisor_pilot 3898650 3690473
[2025-10-12 18:44:05] 2025-10-12 16:27:41,830 [wrapper] Test setup, not cleaning
[2025-10-12 18:44:05] 2025-10-12 16:27:41,833 [wrapper] apfmon messages muted
[2025-10-12 18:44:05] 2025-10-12 16:27:41,836 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:44:05] 2025-10-12 16:27:41,838 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:44:05]  *** Error codes and diagnostics ***
[2025-10-12 18:44:05]     "exeErrorCode": 0,
[2025-10-12 18:44:05]     "exeErrorDiag": "",
[2025-10-12 18:44:05]     "pilotErrorCode": 0,
[2025-10-12 18:44:05]     "pilotErrorDiag": "",
[2025-10-12 18:44:05]  *** Listing of results directory ***
[2025-10-12 18:44:05] total 416900
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:01 pilot3.tar.gz
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:04 queuedata.json
[2025-10-12 18:44:05] -rwx------ 1 boinc boinc     36292 Oct 11 17:04 runpilot2-wrapper.sh
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc       100 Oct 12 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:44:05] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 15:32 run_atlas
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc       105 Oct 12 15:32 job.xml
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc      6633 Oct 12 15:32 init_data.xml
[2025-10-12 18:44:05] -rw-r--r-- 2 boinc boinc 219092689 Oct 12 15:32 EVNT.46676267._002381.pool.root.1
[2025-10-12 18:44:05] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:32 start_atlas.sh
[2025-10-12 18:44:05] drwxrwx--x 2 boinc boinc      4096 Oct 12 15:32 shared
[2025-10-12 18:44:05] -rw-r--r-- 2 boinc boinc    569680 Oct 12 15:32 input.tar.gz
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:32 boinc_lockfile
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc      2550 Oct 12 15:32 pandaJob.out
[2025-10-12 18:44:05] -rw------- 1 boinc boinc    975528 Oct 12 15:32 agis_schedconf.cvmfs.json
[2025-10-12 18:44:05] -rw------- 1 boinc boinc   1560580 Oct 12 15:32 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:44:05] drwx------ 5 boinc boinc      4096 Oct 12 15:32 pilot3
[2025-10-12 18:44:05] -rw------- 1 boinc boinc 200240409 Oct 12 18:26 HITS.46676269._059854.pool.root.1
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc       528 Oct 12 18:26 boinc_task_state.xml
[2025-10-12 18:44:05] -rw------- 1 boinc boinc      1032 Oct 12 18:26 memory_monitor_summary.json
[2025-10-12 18:44:05] -rw------- 1 boinc boinc    342243 Oct 12 18:26 log.46676269._059854.job.log.tgz.1
[2025-10-12 18:44:05] -rw------- 1 boinc boinc      7825 Oct 12 18:26 heartbeat.json
[2025-10-12 18:44:05] -rw------- 1 boinc boinc        95 Oct 12 18:27 pilot_heartbeat.json
[2025-10-12 18:44:05] -rw------- 1 boinc boinc      4833 Oct 12 18:27 pilotlog.txt
[2025-10-12 18:44:05] -rw------- 1 boinc boinc   1492105 Oct 12 18:27 log.46676269._059854.job.log.1
[2025-10-12 18:44:05] -rw------- 1 boinc boinc       357 Oct 12 18:27 output.list
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc       620 Oct 12 18:27 runtime_log
[2025-10-12 18:44:05] -rw------- 1 boinc boinc   1853440 Oct 12 18:27 result.tar.gz
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc      9070 Oct 12 18:27 runtime_log.err
[2025-10-12 18:44:05] -rw------- 1 boinc boinc       664 Oct 12 18:27 89lLDmtJqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmK7RMDm8u9DTn.diag
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc        27 Oct 12 18:43 wrapper_checkpoint.txt
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc      8192 Oct 12 18:44 boinc_mmap_file
[2025-10-12 18:44:05] -rw-r--r-- 1 boinc boinc     20909 Oct 12 18:44 stderr.txt
[2025-10-12 18:44:05] HITS file was successfully produced:
[2025-10-12 18:44:05] -rw------- 1 boinc boinc 200240409 Oct 12 18:26 shared/HITS.pool.root.1
[2025-10-12 18:44:05]  *** Contents of shared directory: ***
[2025-10-12 18:44:05] total 411900
[2025-10-12 18:44:05] -rw-r--r-- 2 boinc boinc 219092689 Oct 12 15:32 ATLAS.root_0
[2025-10-12 18:44:05] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:32 start_atlas.sh
[2025-10-12 18:44:05] -rw-r--r-- 2 boinc boinc    569680 Oct 12 15:32 input.tar.gz
[2025-10-12 18:44:05] -rw------- 1 boinc boinc 200240409 Oct 12 18:26 HITS.pool.root.1
[2025-10-12 18:44:05] -rw------- 1 boinc boinc   1853440 Oct 12 18:27 result.tar.gz
18:44:07 (3686445): run_atlas exited; CPU time 40769.790587
18:44:07 (3686445): called boinc_finish(0)

</stderr_txt>
]]>

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