Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:47 (2043082): wrapper (7.7.26015): starting
00:01:47 (2043082): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 00:01:47] Arguments: --nthreads 11
[2025-10-12 00:01:47] Threads: 11
[2025-10-12 00:01:47] Checking for CVMFS
[2025-10-12 00:01:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:01:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:01:49] 2.13.2.0 129930 117071 509336 151606 2 63 32378445 40960001 17358 16776704 1 78362919 99.711 56649982 26987 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:01:49] CVMFS is ok
[2025-10-12 00:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:01:49] Further information can be found at the LHC@home message board.
[2025-10-12 00:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:01:49] Checking for apptainer binary...
[2025-10-12 00:01:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:01:49] Running /usr/bin/apptainer --version
[2025-10-12 00:01:49] apptainer version 1.4.3-1.el9
[2025-10-12 00:01:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:01:50] c-211-13.aglt2.org
[2025-10-12 00:01:50] apptainer works
[2025-10-12 00:01:51] Set ATHENA_PROC_NUMBER=11
[2025-10-12 00:01:51] Set ATHENA_CORE_NUMBER=11
[2025-10-12 00:01:51] Starting ATLAS job with PandaID=6838603107
[2025-10-12 00:01:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:37:41]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:37:41] 2025-10-12 13:37:04,371 | INFO     | PID=2051147 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:37:41] 2025-10-12 13:37:04,371 | INFO     | .. there are 15 such processes running
[2025-10-12 09:37:41] 2025-10-12 13:37:05,294 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 09:37:41] 2025-10-12 13:37:05,309 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2499.7540625000006
[2025-10-12 09:37:41] 2025-10-12 13:37:05,319 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6838603107/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:37:41] 2025-10-12 13:37:05,320 | INFO     | extracted standard info from prmon json
[2025-10-12 09:37:41] 2025-10-12 13:37:05,320 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:37:41] 2025-10-12 13:37:05,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:37:41] 2025-10-12 13:37:05,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:37:41] 2025-10-12 13:37:05,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:37:41] 2025-10-12 13:37:05,333 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:37:41] 2025-10-12 13:37:05,335 | INFO     | sum of square deviations: 54747561680.19617
[2025-10-12 09:37:41] 2025-10-12 13:37:05,345 | INFO     | sum of deviations: 279117848217.39197
[2025-10-12 09:37:41] 2025-10-12 13:37:05,345 | INFO     | mean x: 1760259079.509804
[2025-10-12 09:37:41] 2025-10-12 13:37:05,345 | INFO     | mean y: 2602164.110516934
[2025-10-12 09:37:41] 2025-10-12 13:37:05,345 | INFO     | -- intersect: -8971673794.477581
[2025-10-12 09:37:41] 2025-10-12 13:37:05,346 | INFO     | intersect: -8971673794.477581
[2025-10-12 09:37:41] 2025-10-12 13:37:05,347 | INFO     | chi2: 5.729517429818006
[2025-10-12 09:37:41] 2025-10-12 13:37:05,348 | INFO     | sum of square deviations: 53296983498.69596
[2025-10-12 09:37:41] 2025-10-12 13:37:05,357 | INFO     | sum of deviations: 350673447789.5929
[2025-10-12 09:37:41] 2025-10-12 13:37:05,358 | INFO     | mean x: 1760258927.0233812
[2025-10-12 09:37:41] 2025-10-12 13:37:05,358 | INFO     | mean y: 2609643.492805755
[2025-10-12 09:37:41] 2025-10-12 13:37:05,358 | INFO     | -- intersect: -11579210309.916033
[2025-10-12 09:37:41] 2025-10-12 13:37:05,358 | INFO     | intersect: -11579210309.916033
[2025-10-12 09:37:41] 2025-10-12 13:37:05,359 | INFO     | chi2: 4.3480622087462955
[2025-10-12 09:37:41] 2025-10-12 13:37:05,359 | INFO     | current chi2=4.3480622087462955 (change=24.11119676296353 %)
[2025-10-12 09:37:41] 2025-10-12 13:37:05,359 | INFO     | right removable region: 555
[2025-10-12 09:37:41] 2025-10-12 13:37:05,360 | INFO     | sum of square deviations: 53296466828.695984
[2025-10-12 09:37:41] 2025-10-12 13:37:05,370 | INFO     | sum of deviations: 96749232028.70505
[2025-10-12 09:37:41] 2025-10-12 13:37:05,371 | INFO     | mean x: 1760259232.0233812
[2025-10-12 09:37:41] 2025-10-12 13:37:05,371 | INFO     | mean y: 2621314.5611510794
[2025-10-12 09:37:41] 2025-10-12 13:37:05,371 | INFO     | -- intersect: -3192782414.8659
[2025-10-12 09:37:41] 2025-10-12 13:37:05,371 | INFO     | intersect: -3192782414.8659
[2025-10-12 09:37:41] 2025-10-12 13:37:05,372 | INFO     | chi2: 2.1983015756579976
[2025-10-12 09:37:41] 2025-10-12 13:37:05,372 | INFO     | current chi2=2.1983015756579976 (change=61.63199427202327 %)
[2025-10-12 09:37:41] 2025-10-12 13:37:05,373 | INFO     | sum of square deviations: 51871334681.19411
[2025-10-12 09:37:41] 2025-10-12 13:37:05,381 | INFO     | time since job start (34419s) is within the limit (172800.0s)
[2025-10-12 09:37:41] 2025-10-12 13:37:05,384 | INFO     | sum of deviations: 32919924844.696938
[2025-10-12 09:37:41] 2025-10-12 13:37:05,384 | INFO     | mean x: 1760259384.5317605
[2025-10-12 09:37:41] 2025-10-12 13:37:05,384 | INFO     | mean y: 2628134.1887477315
[2025-10-12 09:37:41] 2025-10-12 13:37:05,385 | INFO     | -- intersect: -1114513096.1672716
[2025-10-12 09:37:41] 2025-10-12 13:37:05,385 | INFO     | intersect: -1114513096.1672716
[2025-10-12 09:37:41] 2025-10-12 13:37:05,386 | INFO     | chi2: 1.7468453863604565
[2025-10-12 09:37:41] 2025-10-12 13:37:05,386 | INFO     | current chi2=1.7468453863604565 (change=20.53659035214087 %)
[2025-10-12 09:37:41] 2025-10-12 13:37:05,386 | INFO     | left removable region: 20
[2025-10-12 09:37:41] 2025-10-12 13:37:05,387 | INFO     | sum of square deviations: 47482678668.12333
[2025-10-12 09:37:41] 2025-10-12 13:37:05,396 | INFO     | sum of deviations: 25321920795.072914
[2025-10-12 09:37:41] 2025-10-12 13:37:05,396 | INFO     | mean x: 1760259506.5551403
[2025-10-12 09:37:41] 2025-10-12 13:37:05,397 | INFO     | mean y: 2644886.828037383
[2025-10-12 09:37:41] 2025-10-12 13:37:05,397 | INFO     | -- intersect: -936079571.3118274
[2025-10-12 09:37:41] 2025-10-12 13:37:05,397 | INFO     | intersect: -936079571.3118274
[2025-10-12 09:37:41] 2025-10-12 13:37:05,398 | INFO     | chi2: 0.009573743049966082
[2025-10-12 09:37:41] 2025-10-12 13:37:05,398 | INFO     | -- intersect: -936079571.3118274
[2025-10-12 09:37:41] 2025-10-12 13:37:05,398 | INFO     | current memory leak: 0.53 B/s (using 535 data points, chi2=0.01)
[2025-10-12 09:37:41] 2025-10-12 13:37:05,399 | INFO     | could have reported an average CPU frequency of 2545 MHz (22 samples)
[2025-10-12 09:37:41] 2025-10-12 13:37:05,400 | INFO     | ..............................
[2025-10-12 09:37:41] 2025-10-12 13:37:05,400 | INFO     | . Timing measurements:
[2025-10-12 09:37:41] 2025-10-12 13:37:05,400 | INFO     | . get job = 0 s
[2025-10-12 09:37:41] 2025-10-12 13:37:05,400 | INFO     | . initial setup = 8 s
[2025-10-12 09:37:41] 2025-10-12 13:37:05,400 | INFO     | . payload setup = 60 s
[2025-10-12 09:37:41] 2025-10-12 13:37:05,401 | INFO     | . stage-in = 0 s
[2025-10-12 09:37:41] 2025-10-12 13:37:05,401 | INFO     | . payload execution = 34229 s
[2025-10-12 09:37:41] 2025-10-12 13:37:05,401 | INFO     | . stage-out = 7 s
[2025-10-12 09:37:41] 2025-10-12 13:37:05,401 | INFO     | . log creation = 1 s
[2025-10-12 09:37:41] 2025-10-12 13:37:05,401 | INFO     | ..............................
[2025-10-12 09:37:41] 2025-10-12 13:37:05,946 | INFO     | 
[2025-10-12 09:37:41] 2025-10-12 13:37:05,946 | INFO     | job summary report
[2025-10-12 09:37:41] 2025-10-12 13:37:05,947 | INFO     | --------------------------------------------------
[2025-10-12 09:37:41] 2025-10-12 13:37:05,947 | INFO     | PanDA job id: 6838603107
[2025-10-12 09:37:41] 2025-10-12 13:37:05,947 | INFO     | task id: 46676269
[2025-10-12 09:37:41] 2025-10-12 13:37:05,947 | INFO     | errors: (none)
[2025-10-12 09:37:41] 2025-10-12 13:37:05,947 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:37:41] 2025-10-12 13:37:05,947 | INFO     | pilot state: finished 
[2025-10-12 09:37:41] 2025-10-12 13:37:05,947 | INFO     | transexitcode: 0
[2025-10-12 09:37:41] 2025-10-12 13:37:05,948 | INFO     | exeerrorcode: 0
[2025-10-12 09:37:41] 2025-10-12 13:37:05,948 | INFO     | exeerrordiag: 
[2025-10-12 09:37:41] 2025-10-12 13:37:05,948 | INFO     | exitcode: 0
[2025-10-12 09:37:41] 2025-10-12 13:37:05,948 | INFO     | exitmsg: OK
[2025-10-12 09:37:41] 2025-10-12 13:37:05,948 | INFO     | cpuconsumptiontime: 60153 s
[2025-10-12 09:37:41] 2025-10-12 13:37:05,948 | INFO     | nevents: 400
[2025-10-12 09:37:41] 2025-10-12 13:37:05,948 | INFO     | neventsw: 0
[2025-10-12 09:37:41] 2025-10-12 13:37:05,948 | INFO     | pid: 2067176
[2025-10-12 09:37:41] 2025-10-12 13:37:05,949 | INFO     | pgrp: 2067176
[2025-10-12 09:37:41] 2025-10-12 13:37:05,949 | INFO     | corecount: 11
[2025-10-12 09:37:41] 2025-10-12 13:37:05,949 | INFO     | event service: False
[2025-10-12 09:37:41] 2025-10-12 13:37:05,949 | INFO     | sizes: {0: 2348029, 1: 2348714, 3: 2348913, 4: 2348941, 15: 2348941, 27: 2348969, 39: 2349125, 45: 2349415, 49: 2349443, 34295: 2388914, 34296: 2388913, 34304: 239
[2025-10-12 09:37:41] 2025-10-12 13:37:05,949 | INFO     | --------------------------------------------------
[2025-10-12 09:37:41] 2025-10-12 13:37:05,949 | INFO     | 
[2025-10-12 09:37:41] 2025-10-12 13:37:05,949 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 09:37:41] 2025-10-12 13:37:05,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:05,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:37:41] 2025-10-12 13:37:05,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:06,000 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:37:41] 2025-10-12 13:37:06,000 | INFO     | job 6838603107 has completed (purged errors)
[2025-10-12 09:37:41] 2025-10-12 13:37:06,001 | INFO     | overall cleanup function is called
[2025-10-12 09:37:41] 2025-10-12 13:37:07,031 | INFO     | --- collectZombieJob: --- 10, [2067176]
[2025-10-12 09:37:41] 2025-10-12 13:37:07,033 | INFO     | zombie collector waiting for pid 2067176
[2025-10-12 09:37:41] 2025-10-12 13:37:07,034 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:37:41] 2025-10-12 13:37:07,034 | INFO     | collected zombie processes
[2025-10-12 09:37:41] 2025-10-12 13:37:07,034 | INFO     | will attempt to kill all subprocesses of pid=2067176
[2025-10-12 09:37:41] 2025-10-12 13:37:08,720 | INFO     | process IDs to be killed: [2067176] (in reverse order)
[2025-10-12 09:37:41] 2025-10-12 13:37:09,051 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:37:41] 2025-10-12 13:37:09,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:37:41] 2025-10-12 13:37:09,065 | INFO     | did not find any defunct processes belonging to 2067176
[2025-10-12 09:37:41] 2025-10-12 13:37:09,083 | INFO     | did not find any defunct processes belonging to 2067176
[2025-10-12 09:37:41] 2025-10-12 13:37:09,083 | INFO     | ready for new job
[2025-10-12 09:37:41] 2025-10-12 13:37:09,084 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:37:41] 2025-10-12 13:37:09,087 | INFO     | ***************************************
[2025-10-12 09:37:41] 2025-10-12 13:37:09,088 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:37:41] 2025-10-12 13:37:09,088 | INFO     | ***************************************
[2025-10-12 09:37:41] 2025-10-12 13:37:09,088 | INFO     | 
[2025-10-12 09:37:41] 2025-10-12 13:37:09,092 | INFO     | architecture information:
[2025-10-12 09:37:41] 2025-10-12 13:37:09,093 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:37:41] 2025-10-12 13:37:09,227 | INFO     | cat /etc/os-release:
[2025-10-12 09:37:41] NAME="CentOS Linux"
[2025-10-12 09:37:41] VERSION="7 (Core)"
[2025-10-12 09:37:41] ID="centos"
[2025-10-12 09:37:41] ID_LIKE="rhel fedora"
[2025-10-12 09:37:41] VERSION_ID="7"
[2025-10-12 09:37:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:37:41] ANSI_COLOR="0;31"
[2025-10-12 09:37:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:37:41] HOME_URL="https://www.centos.org/"
[2025-10-12 09:37:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:37:41] 
[2025-10-12 09:37:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:37:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:37:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:37:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:37:41] 
[2025-10-12 09:37:41] 2025-10-12 13:37:09,227 | INFO     | ***************************************
[2025-10-12 09:37:41] 2025-10-12 13:37:09,730 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 09:37:41] 2025-10-12 13:37:09,812 | INFO     | sufficient remaining disk space (63110643712 B)
[2025-10-12 09:37:41] 2025-10-12 13:37:09,812 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:37:41] 2025-10-12 13:37:09,812 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:37:41] 2025-10-12 13:37:09,813 | INFO     | update_server=False
[2025-10-12 09:37:41] 2025-10-12 13:37:09,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:37:41] 2025-10-12 13:37:09,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:37:41] 2025-10-12 13:37:09,955 | INFO     | all data control threads have been joined
[2025-10-12 09:37:41] 2025-10-12 13:37:10,109 | INFO     | all job control threads have been joined
[2025-10-12 09:37:41] 2025-10-12 13:37:10,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:37:41] 2025-10-12 13:37:10,168 | INFO     | aborting loop
[2025-10-12 09:37:41] 2025-10-12 13:37:10,818 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:10,924 | INFO     | all payload control threads have been joined
[2025-10-12 09:37:41] 2025-10-12 13:37:10,957 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:10,961 | INFO     | [data] control thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:10,971 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:10,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:37:41] 2025-10-12 13:37:10,981 | INFO     | [job] validate thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:11,115 | INFO     | [job] control thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:11,173 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:11,687 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:11,693 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:11,834 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:11,930 | INFO     | [payload] control thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:11,979 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:12,144 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:12,188 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:12,287 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:13,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:37:41] 2025-10-12 13:37:17,071 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:37:41] 2025-10-12 13:37:32,495 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:37:41] 2025-10-12 13:37:34,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414757406528)>', '<ExcThread(monitor, started 140414401103616)>']
[2025-10-12 09:37:41] 2025-10-12 13:37:38,908 | INFO     | PID=2051147 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:37:41] 2025-10-12 13:37:38,908 | INFO     | .. there are 15 such processes running
[2025-10-12 09:37:41] 2025-10-12 13:37:38,909 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:37:41] 2025-10-12 13:37:38,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:37:41] 2025-10-12 13:37:38,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:37:41] 2025-10-12 13:37:38,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:37:41] 2025-10-12 13:37:38,909 | INFO     | [monitor] control thread has ended
[2025-10-12 09:37:41] 2025-10-12 13:37:39,408 | INFO     | all workflow threads have been joined
[2025-10-12 09:37:41] 2025-10-12 13:37:39,408 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:37:41] 2025-10-12 13:37:39,409 | INFO     | traces error code: 0
[2025-10-12 09:37:41] 2025-10-12 13:37:39,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:37:41] 2025-10-12 13:37:40,106 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:37:41] 2025-10-12 13:37:40,181 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:37:41] 2025-10-12 13:37:40,249 [wrapper] pilotpid: 2051147
[2025-10-12 09:37:41] 2025-10-12 13:37:40,303 [wrapper] Pilot exit status: 0
[2025-10-12 09:37:41] 2025-10-12 13:37:40,577 [wrapper] pandaids: 6838603107
[2025-10-12 09:37:41] 2025-10-12 13:37:40,670 [wrapper] cleanup supervisor_pilot 3019853 2051148
[2025-10-12 09:37:41] 2025-10-12 13:37:40,674 [wrapper] Test setup, not cleaning
[2025-10-12 09:37:41] 2025-10-12 13:37:40,685 [wrapper] apfmon messages muted
[2025-10-12 09:37:41] 2025-10-12 13:37:40,735 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:37:41] 2025-10-12 13:37:40,751 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:37:41]  *** Error codes and diagnostics ***
[2025-10-12 09:37:41]     "exeErrorCode": 0,
[2025-10-12 09:37:41]     "exeErrorDiag": "",
[2025-10-12 09:37:41]     "pilotErrorCode": 0,
[2025-10-12 09:37:41]     "pilotErrorDiag": "",
[2025-10-12 09:37:41]  *** Listing of results directory ***
[2025-10-12 09:37:41] total 412804
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 11:04 queuedata.json
[2025-10-12 09:37:41] -rwx------. 1 boincer umatlas     36292 Oct 11 11:05 runpilot2-wrapper.sh
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:37:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 09:37:41] -rw-r--r--. 2 boincer umatlas 219092689 Oct 12 00:01 EVNT.46676267._002381.pool.root.1
[2025-10-12 09:37:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 09:37:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 09:37:41] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 00:01 input.tar.gz
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:01 pandaJob.out
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-12 09:37:41] drwx------. 5 boincer umatlas      4096 Oct 12 00:03 pilot3
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas      6613 Oct 12 09:30 init_data.xml
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas 190458931 Oct 12 09:34 HITS.46676269._059864.pool.root.1
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas       531 Oct 12 09:34 boinc_task_state.xml
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas      1043 Oct 12 09:36 memory_monitor_summary.json
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas    738855 Oct 12 09:36 log.46676269._059864.job.log.tgz.1
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas        95 Oct 12 09:36 pilot_heartbeat.json
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas      7828 Oct 12 09:37 heartbeat.json
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:37 wrapper_checkpoint.txt
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas      4824 Oct 12 09:37 pilotlog.txt
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas   3889000 Oct 12 09:37 log.46676269._059864.job.log.1
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:37 boinc_mmap_file
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas       357 Oct 12 09:37 output.list
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:37 runtime_log
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas   4648960 Oct 12 09:37 result.tar.gz
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 09:37 runtime_log.err
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas       658 Oct 12 09:37 o3ALDmsKqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnlgNDm5Rhbwm.diag
[2025-10-12 09:37:41] -rw-r--r--. 1 boincer umatlas     21321 Oct 12 09:37 stderr.txt
[2025-10-12 09:37:41] HITS file was successfully produced:
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas 190458931 Oct 12 09:34 shared/HITS.pool.root.1
[2025-10-12 09:37:41]  *** Contents of shared directory: ***
[2025-10-12 09:37:41] total 405076
[2025-10-12 09:37:41] -rw-r--r--. 2 boincer umatlas 219092689 Oct 12 00:01 ATLAS.root_0
[2025-10-12 09:37:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 09:37:41] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 00:01 input.tar.gz
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas 190458931 Oct 12 09:34 HITS.pool.root.1
[2025-10-12 09:37:41] -rw-------. 1 boincer umatlas   4648960 Oct 12 09:37 result.tar.gz
09:37:42 (2043082): run_atlas exited; CPU time 61235.204328
09:37:42 (2043082): called boinc_finish(0)

</stderr_txt>
]]>

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