Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:16:57 (3440116): wrapper (7.7.26015): starting
12:16:57 (3440116): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 12:16:57] Arguments: --nthreads 4
[2025-10-12 12:16:57] Threads: 4
[2025-10-12 12:16:57] Checking for CVMFS
[2025-10-12 12:16:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:16:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:16:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:16:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:16:58] 2.13.2.0 1261730 1792 50776 151602 1 57 3684959 6144001 2733 130560 0 4773490 99.997 58871 95 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-12 12:16:58] CVMFS is ok
[2025-10-12 12:16:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:16:58] Checking for apptainer binary...
[2025-10-12 12:16:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:16:58] Running /usr/bin/apptainer --version
[2025-10-12 12:16:58] apptainer version 1.4.0
[2025-10-12 12:16:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:16:58] Zen
[2025-10-12 12:16:58] apptainer works
[2025-10-12 12:16:58] Set ATHENA_PROC_NUMBER=4
[2025-10-12 12:16:58] Set ATHENA_CORE_NUMBER=4
[2025-10-12 12:16:58] Starting ATLAS job with PandaID=6838454927
[2025-10-12 12:16:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:59:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:59:27] 2025-10-12 02:58:49,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:59:27] 2025-10-12 02:58:49,079 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:59:27] 2025-10-12 02:58:49,079 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,079 | INFO     | sum of deviations: -601782018.9999976
[2025-10-12 13:59:27] 2025-10-12 02:58:49,079 | INFO     | mean x: 1760234871.5
[2025-10-12 13:59:27] 2025-10-12 02:58:49,079 | INFO     | mean y: 2392564.24
[2025-10-12 13:59:27] 2025-10-12 02:58:49,079 | INFO     | -- intersect: 3418840723.0643897
[2025-10-12 13:59:27] 2025-10-12 02:58:49,079 | INFO     | intersect: 3418840723.0643897
[2025-10-12 13:59:27] 2025-10-12 02:58:49,080 | INFO     | chi2: 1.75379029891729
[2025-10-12 13:59:27] 2025-10-12 02:58:49,080 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,080 | INFO     | sum of deviations: 296002194.9999986
[2025-10-12 13:59:27] 2025-10-12 02:58:49,080 | INFO     | mean x: 1760234719.0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,080 | INFO     | mean y: 2395662.747368421
[2025-10-12 13:59:27] 2025-10-12 02:58:49,080 | INFO     | -- intersect: -1957641918.4336448
[2025-10-12 13:59:27] 2025-10-12 02:58:49,080 | INFO     | intersect: -1957641918.4336448
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | chi2: 1.758588500988284
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | current chi2=1.758588500988284 (change=-0.2735904100938526 %)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | right removable region: 94
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | sum of deviations: -15709731502.0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | mean x: 1760235024.0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | mean y: 2443444.0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | -- intersect: 104027582411.38934
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | intersect: 104027582411.38934
[2025-10-12 13:59:27] 2025-10-12 02:58:49,081 | INFO     | chi2: 0.06636096718791035
[2025-10-12 13:59:27] 2025-10-12 02:58:49,082 | INFO     | current chi2=0.06636096718791035 (change=96.21614013779876 %)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,082 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 13:59:27] 2025-10-12 02:58:49,082 | INFO     | sum of deviations: -12467375749.000004
[2025-10-12 13:59:27] 2025-10-12 02:58:49,082 | INFO     | mean x: 1760235176.5
[2025-10-12 13:59:27] 2025-10-12 02:58:49,082 | INFO     | mean y: 2430926.933333333
[2025-10-12 13:59:27] 2025-10-12 02:58:49,082 | INFO     | -- intersect: 97096658701.86649
[2025-10-12 13:59:27] 2025-10-12 02:58:49,082 | INFO     | intersect: 97096658701.86649
[2025-10-12 13:59:27] 2025-10-12 02:58:49,082 | INFO     | chi2: 0.05968196040653101
[2025-10-12 13:59:27] 2025-10-12 02:58:49,082 | INFO     | current chi2=0.05968196040653101 (change=10.064661599139743 %)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,083 | INFO     | left removable region: 20
[2025-10-12 13:59:27] 2025-10-12 02:58:49,083 | INFO     | sum of square deviations: 125630262.5
[2025-10-12 13:59:27] 2025-10-12 02:58:49,083 | INFO     | sum of deviations: -4208371883.0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,083 | INFO     | mean x: 1760235298.5
[2025-10-12 13:59:27] 2025-10-12 02:58:49,083 | INFO     | mean y: 2403211.108108108
[2025-10-12 13:59:27] 2025-10-12 02:58:49,083 | INFO     | -- intersect: 58966896242.168304
[2025-10-12 13:59:27] 2025-10-12 02:58:49,083 | INFO     | intersect: 58966896242.168304
[2025-10-12 13:59:27] 2025-10-12 02:58:49,083 | INFO     | sufficient remaining disk space (206976319488 B)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,084 | INFO     | chi2: 0.00986388102454984
[2025-10-12 13:59:27] 2025-10-12 02:58:49,084 | INFO     | -- intersect: 58966896242.168304
[2025-10-12 13:59:27] 2025-10-12 02:58:49,084 | INFO     | current memory leak: -33.50 B/s (using 74 data points, chi2=0.01)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,084 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,084 | INFO     | could have reported an average CPU frequency of 4136 MHz (7 samples)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | ..............................
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | . Timing measurements:
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | . get job = 0 s
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | . initial setup = 6 s
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | . payload setup = 3 s
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | . stage-in = 0 s
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | . payload execution = 6065 s
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | . stage-out = 0 s
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | . log creation = 0 s
[2025-10-12 13:59:27] 2025-10-12 02:58:49,085 | INFO     | ..............................
[2025-10-12 13:59:27] 2025-10-12 02:58:49,149 | INFO     | size of work directory /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6838454927: 2824389 B (within 2537553920 B limit)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,150 | INFO     | pfn file=/home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6838454927/HITS.46676269._059613.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,150 | INFO     | total size of present files: 0 B (workdir size: 2824389 B)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,150 | INFO     | output file size check: skipping output file /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6838454927/HITS.46676269._059613.pool.root.1 since it does not exist
[2025-10-12 13:59:27] 2025-10-12 02:58:49,243 | INFO     | 
[2025-10-12 13:59:27] 2025-10-12 02:58:49,244 | INFO     | job summary report
[2025-10-12 13:59:27] 2025-10-12 02:58:49,244 | INFO     | --------------------------------------------------
[2025-10-12 13:59:27] 2025-10-12 02:58:49,244 | INFO     | PanDA job id: 6838454927
[2025-10-12 13:59:27] 2025-10-12 02:58:49,244 | INFO     | task id: 46676269
[2025-10-12 13:59:27] 2025-10-12 02:58:49,244 | INFO     | errors: (none)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,244 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:59:27] 2025-10-12 02:58:49,244 | INFO     | pilot state: finished 
[2025-10-12 13:59:27] 2025-10-12 02:58:49,244 | INFO     | transexitcode: 0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,244 | INFO     | exeerrorcode: 0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,267 | INFO     | exeerrordiag: 
[2025-10-12 13:59:27] 2025-10-12 02:58:49,267 | INFO     | exitcode: 0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | exitmsg: OK
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | cpuconsumptiontime: 22994 s
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | nevents: 400
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | neventsw: 0
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | pid: 3450502
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | pgrp: 3450502
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | corecount: 4
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | event service: False
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | sizes: {0: 2348868, 3: 2349130, 11: 2349158, 6072: 2376046, 6073: 2385066, 6075: 2385122, 6084: 2385444}
[2025-10-12 13:59:27] 2025-10-12 02:58:49,268 | INFO     | --------------------------------------------------
[2025-10-12 13:59:27] 2025-10-12 02:58:49,269 | INFO     | 
[2025-10-12 13:59:27] 2025-10-12 02:58:49,269 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/1
[2025-10-12 13:59:27] 2025-10-12 02:58:49,288 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,288 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,288 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,288 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,290 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:59:27] 2025-10-12 02:58:49,290 | INFO     | job 6838454927 has completed (purged errors)
[2025-10-12 13:59:27] 2025-10-12 02:58:49,290 | INFO     | overall cleanup function is called
[2025-10-12 13:59:27] 2025-10-12 02:58:49,308 | INFO     | number of running child processes to parent process 3450502: 1
[2025-10-12 13:59:27] 2025-10-12 02:58:49,308 | INFO     | maximum number of monitored processes: 6
[2025-10-12 13:59:27] 2025-10-12 02:58:49,308 | INFO     | aborting job monitoring since job object (job id=6838454927) has expired
[2025-10-12 13:59:27] 2025-10-12 02:58:50,298 | INFO     | --- collectZombieJob: --- 10, [3450502]
[2025-10-12 13:59:27] 2025-10-12 02:58:50,298 | INFO     | zombie collector waiting for pid 3450502
[2025-10-12 13:59:27] 2025-10-12 02:58:50,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:59:27] 2025-10-12 02:58:50,298 | INFO     | collected zombie processes
[2025-10-12 13:59:27] 2025-10-12 02:58:50,298 | INFO     | will attempt to kill all subprocesses of pid=3450502
[2025-10-12 13:59:27] 2025-10-12 02:58:50,453 | INFO     | process IDs to be killed: [3450502] (in reverse order)
[2025-10-12 13:59:27] 2025-10-12 02:58:50,505 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:59:27] 2025-10-12 02:58:50,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:59:27] 2025-10-12 02:58:50,510 | INFO     | did not find any defunct processes belonging to 3450502
[2025-10-12 13:59:27] 2025-10-12 02:58:50,513 | INFO     | did not find any defunct processes belonging to 3450502
[2025-10-12 13:59:27] 2025-10-12 02:58:50,513 | INFO     | ready for new job
[2025-10-12 13:59:27] 2025-10-12 02:58:50,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:59:27] 2025-10-12 02:58:50,514 | INFO     | ***************************************
[2025-10-12 13:59:27] 2025-10-12 02:58:50,514 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:59:27] 2025-10-12 02:58:50,514 | INFO     | ***************************************
[2025-10-12 13:59:27] 2025-10-12 02:58:50,514 | INFO     | 
[2025-10-12 13:59:27] 2025-10-12 02:58:50,515 | INFO     | architecture information:
[2025-10-12 13:59:27] 2025-10-12 02:58:50,515 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:59:27] 2025-10-12 02:58:50,527 | INFO     | cat /etc/os-release:
[2025-10-12 13:59:27] NAME="CentOS Linux"
[2025-10-12 13:59:27] VERSION="7 (Core)"
[2025-10-12 13:59:27] ID="centos"
[2025-10-12 13:59:27] ID_LIKE="rhel fedora"
[2025-10-12 13:59:27] VERSION_ID="7"
[2025-10-12 13:59:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:59:27] ANSI_COLOR="0;31"
[2025-10-12 13:59:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:59:27] HOME_URL="https://www.centos.org/"
[2025-10-12 13:59:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:59:27] 
[2025-10-12 13:59:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:59:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:59:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:59:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:59:27] 
[2025-10-12 13:59:27] 2025-10-12 02:58:50,527 | INFO     | ***************************************
[2025-10-12 13:59:27] 2025-10-12 02:58:51,030 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/1
[2025-10-12 13:59:27] 2025-10-12 02:58:51,047 | INFO     | sufficient remaining disk space (206979465216 B)
[2025-10-12 13:59:27] 2025-10-12 02:58:51,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:59:27] 2025-10-12 02:58:51,047 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:59:27] 2025-10-12 02:58:51,047 | INFO     | update_server=False
[2025-10-12 13:59:27] 2025-10-12 02:58:51,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:59:27] 2025-10-12 02:58:51,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:59:27] 2025-10-12 02:58:51,048 | INFO     | aborting loop
[2025-10-12 13:59:27] 2025-10-12 02:58:51,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:59:27] 2025-10-12 02:58:51,080 | INFO     | all data control threads have been joined
[2025-10-12 13:59:27] 2025-10-12 02:58:51,201 | INFO     | all job control threads have been joined
[2025-10-12 13:59:27] 2025-10-12 02:58:51,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:59:27] 2025-10-12 02:58:51,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:59:27] 2025-10-12 02:58:51,952 | INFO     | all payload control threads have been joined
[2025-10-12 13:59:27] 2025-10-12 02:58:52,050 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:52,052 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:52,053 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:52,086 | INFO     | [data] control thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:52,206 | INFO     | [job] control thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:52,841 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:52,956 | INFO     | [payload] control thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:53,221 | INFO     | [job] validate thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:53,412 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:53,412 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:53,413 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:53,458 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:53,515 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:53,561 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:58:55,628 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:59:01,616 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:59:27] 2025-10-12 02:59:02,621 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:59:27] 2025-10-12 02:59:20,763 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:59:27] 2025-10-12 02:59:21,695 | INFO     | PID=3443925 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:59:27] 2025-10-12 02:59:21,695 | INFO     | .. there are 4 such processes running
[2025-10-12 13:59:27] 2025-10-12 02:59:21,696 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:59:27] 2025-10-12 02:59:21,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:59:27] 2025-10-12 02:59:21,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:59:27] 2025-10-12 02:59:22,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123951637407552)>', '<ExcThread(monitor, started 123950986151680)>']
[2025-10-12 13:59:27] 2025-10-12 02:59:22,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:59:27] 2025-10-12 02:59:22,701 | INFO     | [monitor] control thread has ended
[2025-10-12 13:59:27] 2025-10-12 02:59:27,659 | INFO     | all workflow threads have been joined
[2025-10-12 13:59:27] 2025-10-12 02:59:27,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:59:27] 2025-10-12 02:59:27,660 | INFO     | traces error code: 0
[2025-10-12 13:59:27] 2025-10-12 02:59:27,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:59:27] 2025-10-12 02:59:27,748 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:59:27] 2025-10-12 02:59:27,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:59:27] 2025-10-12 02:59:27,752 [wrapper] pilotpid: 3443925
[2025-10-12 13:59:27] 2025-10-12 02:59:27,754 [wrapper] Pilot exit status: 0
[2025-10-12 13:59:27] 2025-10-12 02:59:27,762 [wrapper] pandaids: 6838454927
[2025-10-12 13:59:27] 2025-10-12 02:59:27,799 [wrapper] cleanup supervisor_pilot 3550382 3443926
[2025-10-12 13:59:27] 2025-10-12 02:59:27,801 [wrapper] Test setup, not cleaning
[2025-10-12 13:59:27] 2025-10-12 02:59:27,803 [wrapper] apfmon messages muted
[2025-10-12 13:59:27] 2025-10-12 02:59:27,805 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:59:27] 2025-10-12 02:59:27,807 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:59:27]  *** Error codes and diagnostics ***
[2025-10-12 13:59:27]     "exeErrorCode": 0,
[2025-10-12 13:59:27]     "exeErrorDiag": "",
[2025-10-12 13:59:27]     "pilotErrorCode": 0,
[2025-10-12 13:59:27]     "pilotErrorDiag": "",
[2025-10-12 13:59:27]  *** Listing of results directory ***
[2025-10-12 13:59:27] total 411324
[2025-10-12 13:59:27] -rw-r--r-- 1 michael michael    557409 Oct 12 01:01 pilot3.tar.gz
[2025-10-12 13:59:27] -rwx------ 1 michael michael     36292 Oct 12 01:55 runpilot2-wrapper.sh
[2025-10-12 13:59:27] -rw-r--r-- 1 michael michael      5112 Oct 12 01:55 queuedata.json
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael       100 Oct 12 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:59:27] -rwxr-xr-x 1 michael michael      7986 Oct 12 12:16 run_atlas
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael       105 Oct 12 12:16 job.xml
[2025-10-12 13:59:27] -rw-r--r-- 2 michael michael 222278424 Oct 12 12:16 EVNT.46676267._002407.pool.root.1
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael      9816 Oct 12 12:16 init_data.xml
[2025-10-12 13:59:27] drwxrwx--x 2 michael michael      4096 Oct 12 12:16 shared
[2025-10-12 13:59:27] -rw-r--r-- 2 michael michael    569676 Oct 12 12:16 input.tar.gz
[2025-10-12 13:59:27] -rw-r--r-- 2 michael michael     15120 Oct 12 12:16 start_atlas.sh
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael         0 Oct 12 12:16 boinc_lockfile
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael      2550 Oct 12 12:16 pandaJob.out
[2025-10-12 13:59:27] -rw------- 1 michael michael    975496 Oct 12 12:17 agis_schedconf.cvmfs.json
[2025-10-12 13:59:27] -rw------- 1 michael michael   1560580 Oct 12 12:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:59:27] drwx------ 5 michael michael      4096 Oct 12 12:17 pilot3
[2025-10-12 13:59:27] -rw------- 1 michael michael 192603334 Oct 12 13:58 HITS.46676269._059613.pool.root.1
[2025-10-12 13:59:27] -rw------- 1 michael michael      1020 Oct 12 13:58 memory_monitor_summary.json
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael       529 Oct 12 13:58 boinc_task_state.xml
[2025-10-12 13:59:27] -rw------- 1 michael michael    290768 Oct 12 13:58 log.46676269._059613.job.log.tgz.1
[2025-10-12 13:59:27] -rw------- 1 michael michael      7728 Oct 12 13:58 heartbeat.json
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael      8192 Oct 12 13:59 boinc_mmap_file
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael        27 Oct 12 13:59 wrapper_checkpoint.txt
[2025-10-12 13:59:27] -rw------- 1 michael michael        95 Oct 12 13:59 pilot_heartbeat.json
[2025-10-12 13:59:27] -rw------- 1 michael michael      4907 Oct 12 13:59 pilotlog.txt
[2025-10-12 13:59:27] -rw------- 1 michael michael    909833 Oct 12 13:59 log.46676269._059613.job.log.1
[2025-10-12 13:59:27] -rw------- 1 michael michael       357 Oct 12 13:59 output.list
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael       620 Oct 12 13:59 runtime_log
[2025-10-12 13:59:27] -rw------- 1 michael michael   1218560 Oct 12 13:59 result.tar.gz
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael      8797 Oct 12 13:59 runtime_log.err
[2025-10-12 13:59:27] -rw------- 1 michael michael       641 Oct 12 13:59 a7oLDmqBqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmh6RMDmmHxUcn.diag
[2025-10-12 13:59:27] -rw-rw-r-- 1 michael michael     21060 Oct 12 13:59 stderr.txt
[2025-10-12 13:59:27] HITS file was successfully produced:
[2025-10-12 13:59:27] -rw------- 1 michael michael 192603334 Oct 12 13:58 shared/HITS.pool.root.1
[2025-10-12 13:59:27]  *** Contents of shared directory: ***
[2025-10-12 13:59:27] total 406940
[2025-10-12 13:59:27] -rw-r--r-- 2 michael michael 222278424 Oct 12 12:16 ATLAS.root_0
[2025-10-12 13:59:27] -rw-r--r-- 2 michael michael    569676 Oct 12 12:16 input.tar.gz
[2025-10-12 13:59:27] -rw-r--r-- 2 michael michael     15120 Oct 12 12:16 start_atlas.sh
[2025-10-12 13:59:27] -rw------- 1 michael michael 192603334 Oct 12 13:58 HITS.pool.root.1
[2025-10-12 13:59:27] -rw------- 1 michael michael   1218560 Oct 12 13:59 result.tar.gz
13:59:29 (3440116): run_atlas exited; CPU time 23056.193453
13:59:29 (3440116): called boinc_finish(0)

</stderr_txt>
]]>

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