Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:46 (392263): wrapper (7.7.26015): starting
00:01:46 (392263): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:01:46] Arguments: --nthreads 12
[2025-10-12 00:01:46] Threads: 12
[2025-10-12 00:01:46] Checking for CVMFS
[2025-10-12 00:01:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:01:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:01:49] 2.13.2.0 128731 115484 113140 151606 3 110 38166994 39288833 8259 16776704 0 60232606 99.754 38139088 35489 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:01:49] CVMFS is ok
[2025-10-12 00:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:01:49] Further information can be found at the LHC@home message board.
[2025-10-12 00:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:01:49] Checking for apptainer binary...
[2025-10-12 00:01:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:01:49] Running /usr/bin/apptainer --version
[2025-10-12 00:01:49] apptainer version 1.4.3-1.el9
[2025-10-12 00:01:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:01:51] c-210-25.aglt2.org
[2025-10-12 00:01:51] apptainer works
[2025-10-12 00:01:51] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:01:51] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:01:52] Starting ATLAS job with PandaID=6838290200
[2025-10-12 00:01:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:38:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:38:18] 2025-10-12 13:38:04,605 | INFO     | intersect: -19245328882.765797
[2025-10-12 09:38:18] 2025-10-12 13:38:04,606 | INFO     | chi2: 8.547654290002956
[2025-10-12 09:38:18] 2025-10-12 13:38:04,607 | INFO     | current chi2=8.547654290002956 (change=8.21586813563067 %)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,607 | INFO     | right removable region: 555
[2025-10-12 09:38:18] 2025-10-12 13:38:04,608 | INFO     | sum of square deviations: 53286529800.95677
[2025-10-12 09:38:18] 2025-10-12 13:38:04,616 | INFO     | sum of deviations: 357592396153.71204
[2025-10-12 09:38:18] 2025-10-12 13:38:04,616 | INFO     | mean x: 1760259338.7877698
[2025-10-12 09:38:18] 2025-10-12 13:38:04,617 | INFO     | mean y: 2637025.7517985613
[2025-10-12 09:38:18] 2025-10-12 13:38:04,617 | INFO     | -- intersect: -11810017263.433409
[2025-10-12 09:38:18] 2025-10-12 13:38:04,617 | INFO     | intersect: -11810017263.433409
[2025-10-12 09:38:18] 2025-10-12 13:38:04,618 | INFO     | chi2: 5.34779712060336
[2025-10-12 09:38:18] 2025-10-12 13:38:04,618 | INFO     | current chi2=5.34779712060336 (change=42.57571733154598 %)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,619 | INFO     | sum of square deviations: 51861301815.98913
[2025-10-12 09:38:18] 2025-10-12 13:38:04,627 | INFO     | sum of deviations: 212119978809.79126
[2025-10-12 09:38:18] 2025-10-12 13:38:04,627 | INFO     | mean x: 1760259491.3012705
[2025-10-12 09:38:18] 2025-10-12 13:38:04,628 | INFO     | mean y: 2652589.441016334
[2025-10-12 09:38:18] 2025-10-12 13:38:04,628 | INFO     | -- intersect: -7197054955.876374
[2025-10-12 09:38:18] 2025-10-12 13:38:04,628 | INFO     | intersect: -7197054955.876374
[2025-10-12 09:38:18] 2025-10-12 13:38:04,629 | INFO     | chi2: 3.1734310000339128
[2025-10-12 09:38:18] 2025-10-12 13:38:04,629 | INFO     | current chi2=3.1734310000339128 (change=40.65909890620769 %)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,630 | INFO     | sum of square deviations: 50461668847.68481
[2025-10-12 09:38:18] 2025-10-12 13:38:04,638 | INFO     | sum of deviations: 78492842051.95233
[2025-10-12 09:38:18] 2025-10-12 13:38:04,638 | INFO     | mean x: 1760259643.8168497
[2025-10-12 09:38:18] 2025-10-12 13:38:04,638 | INFO     | mean y: 2667144.8095238097
[2025-10-12 09:38:18] 2025-10-12 13:38:04,638 | INFO     | -- intersect: -2735406829.905663
[2025-10-12 09:38:18] 2025-10-12 13:38:04,639 | INFO     | intersect: -2735406829.905663
[2025-10-12 09:38:18] 2025-10-12 13:38:04,639 | INFO     | chi2: 1.3595630714572828
[2025-10-12 09:38:18] 2025-10-12 13:38:04,640 | INFO     | current chi2=1.3595630714572828 (change=57.15794446317711 %)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,640 | INFO     | sum of square deviations: 49087364962.77272
[2025-10-12 09:38:18] 2025-10-12 13:38:04,648 | INFO     | sum of deviations: 13169387992.042488
[2025-10-12 09:38:18] 2025-10-12 13:38:04,649 | INFO     | mean x: 1760259796.336414
[2025-10-12 09:38:18] 2025-10-12 13:38:04,649 | INFO     | mean y: 2674382.774491682
[2025-10-12 09:38:18] 2025-10-12 13:38:04,649 | INFO     | -- intersect: -469576353.0783808
[2025-10-12 09:38:18] 2025-10-12 13:38:04,649 | INFO     | intersect: -469576353.0783808
[2025-10-12 09:38:18] 2025-10-12 13:38:04,650 | INFO     | chi2: 0.8947535475239287
[2025-10-12 09:38:18] 2025-10-12 13:38:04,650 | INFO     | current chi2=0.8947535475239287 (change=34.18815453961515 %)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,651 | INFO     | sum of square deviations: 47738257222.64917
[2025-10-12 09:38:18] 2025-10-12 13:38:04,659 | INFO     | sum of deviations: -2549588341.007454
[2025-10-12 09:38:18] 2025-10-12 13:38:04,659 | INFO     | mean x: 1760259948.8544776
[2025-10-12 09:38:18] 2025-10-12 13:38:04,659 | INFO     | mean y: 2676150.7947761193
[2025-10-12 09:38:18] 2025-10-12 13:38:04,660 | INFO     | -- intersect: 96687505.70893234
[2025-10-12 09:38:18] 2025-10-12 13:38:04,660 | INFO     | intersect: 96687505.70893234
[2025-10-12 09:38:18] 2025-10-12 13:38:04,661 | INFO     | chi2: 0.8410277490422685
[2025-10-12 09:38:18] 2025-10-12 13:38:04,661 | INFO     | current chi2=0.8410277490422685 (change=6.004535956335322 %)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,661 | INFO     | left removable region: 50
[2025-10-12 09:38:18] 2025-10-12 13:38:04,662 | INFO     | sum of square deviations: 39923197328.15043
[2025-10-12 09:38:18] 2025-10-12 13:38:04,668 | INFO     | sum of deviations: 53413620242.72873
[2025-10-12 09:38:18] 2025-10-12 13:38:04,669 | INFO     | mean x: 1760260528.409901
[2025-10-12 09:38:18] 2025-10-12 13:38:04,669 | INFO     | mean y: 2677921.7742574257
[2025-10-12 09:38:18] 2025-10-12 13:38:04,669 | INFO     | -- intersect: -2352391152.9778104
[2025-10-12 09:38:18] 2025-10-12 13:38:04,669 | INFO     | intersect: -2352391152.9778104
[2025-10-12 09:38:18] 2025-10-12 13:38:04,670 | INFO     | chi2: 0.01918698599780096
[2025-10-12 09:38:18] 2025-10-12 13:38:04,670 | INFO     | -- intersect: -2352391152.9778104
[2025-10-12 09:38:18] 2025-10-12 13:38:04,670 | INFO     | current memory leak: 1.34 B/s (using 505 data points, chi2=0.02)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,671 | INFO     | could have reported an average CPU frequency of 2600 MHz (22 samples)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,671 | INFO     | ..............................
[2025-10-12 09:38:18] 2025-10-12 13:38:04,672 | INFO     | . Timing measurements:
[2025-10-12 09:38:18] 2025-10-12 13:38:04,672 | INFO     | . get job = 2 s
[2025-10-12 09:38:18] 2025-10-12 13:38:04,672 | INFO     | . initial setup = 14 s
[2025-10-12 09:38:18] 2025-10-12 13:38:04,672 | INFO     | . payload setup = 66 s
[2025-10-12 09:38:18] 2025-10-12 13:38:04,672 | INFO     | . stage-in = 1 s
[2025-10-12 09:38:18] 2025-10-12 13:38:04,672 | INFO     | . payload execution = 34223 s
[2025-10-12 09:38:18] 2025-10-12 13:38:04,672 | INFO     | . stage-out = 2 s
[2025-10-12 09:38:18] 2025-10-12 13:38:04,672 | INFO     | . log creation = 0 s
[2025-10-12 09:38:18] 2025-10-12 13:38:04,672 | INFO     | ..............................
[2025-10-12 09:38:18] 2025-10-12 13:38:04,767 | INFO     | time since job start (34445s) is within the limit (172800.0s)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,827 | INFO     | 
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | job summary report
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | --------------------------------------------------
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | PanDA job id: 6838290200
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | task id: 46676269
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | errors: (none)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | pilot state: finished 
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | transexitcode: 0
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | exeerrorcode: 0
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | exeerrordiag: 
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | exitcode: 0
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | exitmsg: OK
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | cpuconsumptiontime: 54726 s
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | nevents: 400
[2025-10-12 09:38:18] 2025-10-12 13:38:04,828 | INFO     | neventsw: 0
[2025-10-12 09:38:18] 2025-10-12 13:38:04,829 | INFO     | pid: 407008
[2025-10-12 09:38:18] 2025-10-12 13:38:04,829 | INFO     | pgrp: 407008
[2025-10-12 09:38:18] 2025-10-12 13:38:04,829 | INFO     | corecount: 12
[2025-10-12 09:38:18] 2025-10-12 13:38:04,829 | INFO     | event service: False
[2025-10-12 09:38:18] 2025-10-12 13:38:04,829 | INFO     | sizes: {0: 2348023, 2: 2348624, 3: 2348708, 4: 2348736, 5: 2348764, 6: 2348764, 7: 2349119, 9: 2349147, 20: 2349175, 32: 2349203, 43: 2349231, 56: 2349539, 68: 234
[2025-10-12 09:38:18] 2025-10-12 13:38:04,829 | INFO     | --------------------------------------------------
[2025-10-12 09:38:18] 2025-10-12 13:38:04,829 | INFO     | 
[2025-10-12 09:38:18] 2025-10-12 13:38:04,829 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 09:38:18] 2025-10-12 13:38:04,842 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,842 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,842 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,842 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,843 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:38:18] 2025-10-12 13:38:04,844 | INFO     | job 6838290200 has completed (purged errors)
[2025-10-12 09:38:18] 2025-10-12 13:38:04,844 | INFO     | overall cleanup function is called
[2025-10-12 09:38:18] 2025-10-12 13:38:05,858 | INFO     | --- collectZombieJob: --- 10, [407008]
[2025-10-12 09:38:18] 2025-10-12 13:38:05,859 | INFO     | zombie collector waiting for pid 407008
[2025-10-12 09:38:18] 2025-10-12 13:38:05,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:38:18] 2025-10-12 13:38:05,859 | INFO     | collected zombie processes
[2025-10-12 09:38:18] 2025-10-12 13:38:05,859 | INFO     | will attempt to kill all subprocesses of pid=407008
[2025-10-12 09:38:18] 2025-10-12 13:38:06,036 | INFO     | process IDs to be killed: [407008] (in reverse order)
[2025-10-12 09:38:18] 2025-10-12 13:38:06,107 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:38:18] 2025-10-12 13:38:06,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:38:18] 2025-10-12 13:38:06,117 | INFO     | did not find any defunct processes belonging to 407008
[2025-10-12 09:38:18] 2025-10-12 13:38:06,125 | INFO     | did not find any defunct processes belonging to 407008
[2025-10-12 09:38:18] 2025-10-12 13:38:06,126 | INFO     | ready for new job
[2025-10-12 09:38:18] 2025-10-12 13:38:06,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:38:18] 2025-10-12 13:38:06,129 | INFO     | ***************************************
[2025-10-12 09:38:18] 2025-10-12 13:38:06,129 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:38:18] 2025-10-12 13:38:06,129 | INFO     | ***************************************
[2025-10-12 09:38:18] 2025-10-12 13:38:06,129 | INFO     | 
[2025-10-12 09:38:18] 2025-10-12 13:38:06,131 | INFO     | architecture information:
[2025-10-12 09:38:18] 2025-10-12 13:38:06,132 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:38:18] 2025-10-12 13:38:06,151 | INFO     | cat /etc/os-release:
[2025-10-12 09:38:18] NAME="CentOS Linux"
[2025-10-12 09:38:18] VERSION="7 (Core)"
[2025-10-12 09:38:18] ID="centos"
[2025-10-12 09:38:18] ID_LIKE="rhel fedora"
[2025-10-12 09:38:18] VERSION_ID="7"
[2025-10-12 09:38:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:38:18] ANSI_COLOR="0;31"
[2025-10-12 09:38:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:38:18] HOME_URL="https://www.centos.org/"
[2025-10-12 09:38:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:38:18] 
[2025-10-12 09:38:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:38:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:38:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:38:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:38:18] 
[2025-10-12 09:38:18] 2025-10-12 13:38:06,151 | INFO     | ***************************************
[2025-10-12 09:38:18] 2025-10-12 13:38:06,654 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 09:38:18] 2025-10-12 13:38:06,665 | INFO     | sufficient remaining disk space (53357838336 B)
[2025-10-12 09:38:18] 2025-10-12 13:38:06,666 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:38:18] 2025-10-12 13:38:06,666 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:38:18] 2025-10-12 13:38:06,666 | INFO     | update_server=False
[2025-10-12 09:38:18] 2025-10-12 13:38:06,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:38:18] 2025-10-12 13:38:06,666 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 09:38:18] 2025-10-12 13:38:06,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:38:18] 2025-10-12 13:38:06,667 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:38:18] 2025-10-12 13:38:06,667 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:38:18] 2025-10-12 13:38:06,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:38:18] 2025-10-12 13:38:06,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:38:18] 2025-10-12 13:38:06,896 | INFO     | all data control threads have been joined
[2025-10-12 09:38:18] 2025-10-12 13:38:07,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:38:18] 2025-10-12 13:38:07,207 | INFO     | aborting loop
[2025-10-12 09:38:18] 2025-10-12 13:38:07,362 | INFO     | all job control threads have been joined
[2025-10-12 09:38:18] 2025-10-12 13:38:07,673 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:07,681 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:07,746 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:07,888 | INFO     | all payload control threads have been joined
[2025-10-12 09:38:18] 2025-10-12 13:38:07,903 | INFO     | [data] control thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,069 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:38:18] 2025-10-12 13:38:08,089 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,125 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,213 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,368 | INFO     | [job] control thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,674 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,719 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,755 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,755 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,815 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,840 | INFO     | [job] validate thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,904 | INFO     | [payload] control thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:08,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:38:18] 2025-10-12 13:38:12,953 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:38:18] 2025-10-12 13:38:13,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947856541504)>', '<ExcThread(monitor, started 139947138868992)>']
[2025-10-12 09:38:18] 2025-10-12 13:38:13,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:38:18] 2025-10-12 13:38:13,706 | INFO     | [monitor] control thread has ended
[2025-10-12 09:38:18] 2025-10-12 13:38:18,327 | INFO     | all workflow threads have been joined
[2025-10-12 09:38:18] 2025-10-12 13:38:18,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:38:18] 2025-10-12 13:38:18,327 | INFO     | traces error code: 0
[2025-10-12 09:38:18] 2025-10-12 13:38:18,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:38:18] 2025-10-12 13:38:18,560 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:38:18] 2025-10-12 13:38:18,564 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:38:18] 2025-10-12 13:38:18,569 [wrapper] pilotpid: 397186
[2025-10-12 09:38:18] 2025-10-12 13:38:18,573 [wrapper] Pilot exit status: 0
[2025-10-12 09:38:18] 2025-10-12 13:38:18,593 [wrapper] pandaids: 6838290200
[2025-10-12 09:38:18] 2025-10-12 13:38:18,654 [wrapper] cleanup supervisor_pilot 1286469 397187
[2025-10-12 09:38:18] 2025-10-12 13:38:18,659 [wrapper] Test setup, not cleaning
[2025-10-12 09:38:18] 2025-10-12 13:38:18,663 [wrapper] apfmon messages muted
[2025-10-12 09:38:18] 2025-10-12 13:38:18,668 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:38:18] 2025-10-12 13:38:18,671 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:38:18]  *** Error codes and diagnostics ***
[2025-10-12 09:38:18]     "exeErrorCode": 0,
[2025-10-12 09:38:18]     "exeErrorDiag": "",
[2025-10-12 09:38:18]     "pilotErrorCode": 0,
[2025-10-12 09:38:18]     "pilotErrorDiag": "",
[2025-10-12 09:38:18]  *** Listing of results directory ***
[2025-10-12 09:38:18] total 423996
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 04:40 pilot3.tar.gz
[2025-10-12 09:38:18] -rwx------. 1 boincer umatlas     36292 Oct 11 04:59 runpilot2-wrapper.sh
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 04:59 queuedata.json
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:38:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 09:38:18] -rw-r--r--. 2 boincer umatlas 221780620 Oct 12 00:01 EVNT.46676267._002196.pool.root.1
[2025-10-12 09:38:18] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 00:01 input.tar.gz
[2025-10-12 09:38:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 09:38:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 00:01 pandaJob.out
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-12 09:38:18] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 09:36 init_data.xml
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas 198980385 Oct 12 09:37 HITS.46676269._054753.pool.root.1
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas       531 Oct 12 09:37 boinc_task_state.xml
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas      1042 Oct 12 09:37 memory_monitor_summary.json
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas    733674 Oct 12 09:37 log.46676269._054753.job.log.tgz.1
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas        95 Oct 12 09:38 pilot_heartbeat.json
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas      7827 Oct 12 09:38 heartbeat.json
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:38 boinc_mmap_file
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:38 wrapper_checkpoint.txt
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas      4552 Oct 12 09:38 pilotlog.txt
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas   4018090 Oct 12 09:38 log.46676269._054753.job.log.1
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas       357 Oct 12 09:38 output.list
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:38 runtime_log
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas   4771840 Oct 12 09:38 result.tar.gz
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 09:38 runtime_log.err
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas       657 Oct 12 09:38 IqOODmDdkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSwfNDmaVy3Po.diag
[2025-10-12 09:38:18] -rw-r--r--. 1 boincer umatlas     20991 Oct 12 09:38 stderr.txt
[2025-10-12 09:38:18] HITS file was successfully produced:
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas 198980385 Oct 12 09:37 shared/HITS.pool.root.1
[2025-10-12 09:38:18]  *** Contents of shared directory: ***
[2025-10-12 09:38:18] total 416148
[2025-10-12 09:38:18] -rw-r--r--. 2 boincer umatlas 221780620 Oct 12 00:01 ATLAS.root_0
[2025-10-12 09:38:18] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 00:01 input.tar.gz
[2025-10-12 09:38:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas 198980385 Oct 12 09:37 HITS.pool.root.1
[2025-10-12 09:38:18] -rw-------. 1 boincer umatlas   4771840 Oct 12 09:38 result.tar.gz
09:38:20 (392263): run_atlas exited; CPU time 55641.182425
09:38:20 (392263): called boinc_finish(0)

</stderr_txt>
]]>

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