Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:54 (2043477): wrapper (7.7.26015): starting
00:01:54 (2043477): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 00:01:54] Arguments: --nthreads 11
[2025-10-12 00:01:54] Threads: 11
[2025-10-12 00:01:54] Checking for CVMFS
[2025-10-12 00:01:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:02:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:02:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:02:17] 2.13.2.0 129930 117072 509336 151606 1 63 32378445 40960001 17383 16776704 1 78366466 99.711 56649982 26987 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:02:17] CVMFS is ok
[2025-10-12 00:02:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:02:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:02:17] Further information can be found at the LHC@home message board.
[2025-10-12 00:02:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:02:17] Checking for apptainer binary...
[2025-10-12 00:02:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:02:17] Running /usr/bin/apptainer --version
[2025-10-12 00:02:17] apptainer version 1.4.3-1.el9
[2025-10-12 00:02:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:02:19] c-211-13.aglt2.org
[2025-10-12 00:02:19] apptainer works
[2025-10-12 00:02:19] Set ATHENA_PROC_NUMBER=11
[2025-10-12 00:02:19] Set ATHENA_CORE_NUMBER=11
[2025-10-12 00:02:19] Starting ATLAS job with PandaID=6829685752
[2025-10-12 00:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:38:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:38:04] 2025-10-12 13:27:52,280 | INFO     | sum of deviations: 189546207373.6224
[2025-10-12 09:38:04] 2025-10-12 13:27:52,316 | INFO     | mean x: 1760258789.38294
[2025-10-12 09:38:04] 2025-10-12 13:27:52,317 | INFO     | mean y: 2604440.2577132485
[2025-10-12 09:38:04] 2025-10-12 13:27:52,317 | INFO     | -- intersect: -6429426069.838321
[2025-10-12 09:38:04] 2025-10-12 13:27:52,317 | INFO     | intersect: -6429426069.838321
[2025-10-12 09:38:04] 2025-10-12 13:27:52,318 | INFO     | chi2: 6.12982943464185
[2025-10-12 09:38:04] 2025-10-12 13:27:52,319 | INFO     | sum of square deviations: 50474010388.185165
[2025-10-12 09:38:04] 2025-10-12 13:27:52,575 | INFO     | sum of deviations: 301529474530.07904
[2025-10-12 09:38:04] 2025-10-12 13:27:52,575 | INFO     | mean x: 1760258636.8882785
[2025-10-12 09:38:04] 2025-10-12 13:27:52,576 | INFO     | mean y: 2616601.902930403
[2025-10-12 09:38:04] 2025-10-12 13:27:52,576 | INFO     | -- intersect: -10513089555.30381
[2025-10-12 09:38:04] 2025-10-12 13:27:52,576 | INFO     | intersect: -10513089555.30381
[2025-10-12 09:38:04] 2025-10-12 13:27:52,577 | INFO     | chi2: 3.899716595603256
[2025-10-12 09:38:04] 2025-10-12 13:27:52,593 | INFO     | current chi2=3.899716595603256 (change=36.38131962425303 %)
[2025-10-12 09:38:04] 2025-10-12 13:27:52,595 | INFO     | sum of square deviations: 49099923491.5598
[2025-10-12 09:38:04] 2025-10-12 13:27:52,675 | INFO     | sum of deviations: 298775483445.44586
[2025-10-12 09:38:04] 2025-10-12 13:27:52,675 | INFO     | mean x: 1760258484.3807764
[2025-10-12 09:38:04] 2025-10-12 13:27:52,675 | INFO     | mean y: 2616296.177449168
[2025-10-12 09:38:04] 2025-10-12 13:27:52,675 | INFO     | -- intersect: -10708644379.2128
[2025-10-12 09:38:04] 2025-10-12 13:27:52,676 | INFO     | intersect: -10708644379.2128
[2025-10-12 09:38:04] 2025-10-12 13:27:52,707 | INFO     | chi2: 3.899746627416766
[2025-10-12 09:38:04] 2025-10-12 13:27:52,707 | INFO     | current chi2=3.899746627416766 (change=-0.000770102461909784 %)
[2025-10-12 09:38:04] 2025-10-12 13:27:52,707 | INFO     | right removable region: 540
[2025-10-12 09:38:04] 2025-10-12 13:27:52,708 | INFO     | sum of square deviations: 50473510247.04741
[2025-10-12 09:38:04] 2025-10-12 13:27:52,800 | INFO     | sum of deviations: 15078601652.381012
[2025-10-12 09:38:04] 2025-10-12 13:27:52,853 | INFO     | mean x: 1760258941.9047618
[2025-10-12 09:38:04] 2025-10-12 13:27:52,854 | INFO     | mean y: 2623434.391941392
[2025-10-12 09:38:04] 2025-10-12 13:27:52,854 | INFO     | -- intersect: -523241385.7901711
[2025-10-12 09:38:04] 2025-10-12 13:27:52,854 | INFO     | intersect: -523241385.7901711
[2025-10-12 09:38:04] 2025-10-12 13:27:52,855 | INFO     | chi2: 2.8187206729670597
[2025-10-12 09:38:04] 2025-10-12 13:27:52,856 | INFO     | current chi2=2.8187206729670597 (change=54.016327811056776 %)
[2025-10-12 09:38:04] 2025-10-12 13:27:52,857 | INFO     | sum of square deviations: 49099191964.218185
[2025-10-12 09:38:04] 2025-10-12 13:27:53,001 | INFO     | sum of deviations: -40364709029.15898
[2025-10-12 09:38:04] 2025-10-12 13:27:53,002 | INFO     | mean x: 1760259094.4251387
[2025-10-12 09:38:04] 2025-10-12 13:27:53,002 | INFO     | mean y: 2629579.4528650646
[2025-10-12 09:38:04] 2025-10-12 13:27:53,022 | INFO     | -- intersect: 1449748021.1205432
[2025-10-12 09:38:04] 2025-10-12 13:27:53,022 | INFO     | intersect: 1449748021.1205432
[2025-10-12 09:38:04] 2025-10-12 13:27:53,023 | INFO     | chi2: 2.4827795510026913
[2025-10-12 09:38:04] 2025-10-12 13:27:53,024 | INFO     | current chi2=2.4827795510026913 (change=11.918212584390206 %)
[2025-10-12 09:38:04] 2025-10-12 13:27:53,024 | INFO     | left removable region: 20
[2025-10-12 09:38:04] 2025-10-12 13:27:53,060 | INFO     | sum of square deviations: 43600103868.892365
[2025-10-12 09:38:04] 2025-10-12 13:27:53,155 | INFO     | sum of deviations: 17856783674.169228
[2025-10-12 09:38:04] 2025-10-12 13:27:53,193 | INFO     | mean x: 1760259063.9538462
[2025-10-12 09:38:04] 2025-10-12 13:27:53,194 | INFO     | mean y: 2648381.5903846156
[2025-10-12 09:38:04] 2025-10-12 13:27:53,194 | INFO     | -- intersect: -718280298.0760378
[2025-10-12 09:38:04] 2025-10-12 13:27:53,194 | INFO     | intersect: -718280298.0760378
[2025-10-12 09:38:04] 2025-10-12 13:27:53,195 | INFO     | chi2: 0.006746826980536299
[2025-10-12 09:38:04] 2025-10-12 13:27:53,195 | INFO     | -- intersect: -718280298.0760378
[2025-10-12 09:38:04] 2025-10-12 13:27:53,196 | INFO     | current memory leak: 0.41 B/s (using 520 data points, chi2=0.01)
[2025-10-12 09:38:04] 2025-10-12 13:27:53,197 | INFO     | could have reported an average CPU frequency of 2541 MHz (22 samples)
[2025-10-12 09:38:04] 2025-10-12 13:27:53,340 | INFO     | ..............................
[2025-10-12 09:38:04] 2025-10-12 13:27:53,341 | INFO     | . Timing measurements:
[2025-10-12 09:38:04] 2025-10-12 13:27:53,341 | INFO     | . get job = 0 s
[2025-10-12 09:38:04] 2025-10-12 13:27:53,347 | INFO     | . initial setup = 12 s
[2025-10-12 09:38:04] 2025-10-12 13:27:53,347 | INFO     | . payload setup = 48 s
[2025-10-12 09:38:04] 2025-10-12 13:27:53,348 | INFO     | . stage-in = 0 s
[2025-10-12 09:38:04] 2025-10-12 13:27:53,348 | INFO     | . payload execution = 33630 s
[2025-10-12 09:38:04] 2025-10-12 13:27:53,348 | INFO     | . stage-out = 10 s
[2025-10-12 09:38:04] 2025-10-12 13:27:53,348 | INFO     | . log creation = 3 s
[2025-10-12 09:38:04] 2025-10-12 13:27:53,348 | INFO     | ..............................
[2025-10-12 09:38:04] 2025-10-12 13:27:53,341 | INFO     | monitor loop #1647: job 0:6829685752 is in state 'finished'
[2025-10-12 09:38:04] 2025-10-12 13:27:53,438 | WARNING  | exception caught: deque index out of range
[2025-10-12 09:38:04] 2025-10-12 13:27:54,350 | INFO     | time since job start (33842s) is within the limit (172800.0s)
[2025-10-12 09:38:04] 2025-10-12 13:27:54,445 | INFO     | 
[2025-10-12 09:38:04] 2025-10-12 13:27:54,445 | INFO     | job summary report
[2025-10-12 09:38:04] 2025-10-12 13:27:54,446 | INFO     | --------------------------------------------------
[2025-10-12 09:38:04] 2025-10-12 13:27:54,446 | INFO     | PanDA job id: 6829685752
[2025-10-12 09:38:04] 2025-10-12 13:27:54,446 | INFO     | task id: 46376905
[2025-10-12 09:38:04] 2025-10-12 13:27:54,446 | INFO     | errors: (none)
[2025-10-12 09:38:04] 2025-10-12 13:27:54,446 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:38:04] 2025-10-12 13:27:54,446 | INFO     | pilot state: finished 
[2025-10-12 09:38:04] 2025-10-12 13:27:54,446 | INFO     | transexitcode: 0
[2025-10-12 09:38:04] 2025-10-12 13:27:54,446 | INFO     | exeerrorcode: 0
[2025-10-12 09:38:04] 2025-10-12 13:27:54,447 | INFO     | exeerrordiag: 
[2025-10-12 09:38:04] 2025-10-12 13:27:54,447 | INFO     | exitcode: 0
[2025-10-12 09:38:04] 2025-10-12 13:27:54,447 | INFO     | exitmsg: OK
[2025-10-12 09:38:04] 2025-10-12 13:27:54,447 | INFO     | cpuconsumptiontime: 57875 s
[2025-10-12 09:38:04] 2025-10-12 13:27:54,447 | INFO     | nevents: 400
[2025-10-12 09:38:04] 2025-10-12 13:27:54,447 | INFO     | neventsw: 0
[2025-10-12 09:38:04] 2025-10-12 13:27:54,447 | INFO     | pid: 2070037
[2025-10-12 09:38:04] 2025-10-12 13:27:54,447 | INFO     | pgrp: 2070037
[2025-10-12 09:38:04] 2025-10-12 13:27:54,448 | INFO     | corecount: 11
[2025-10-12 09:38:04] 2025-10-12 13:27:54,448 | INFO     | event service: False
[2025-10-12 09:38:04] 2025-10-12 13:27:54,448 | INFO     | sizes: {0: 2347988, 1: 2348673, 2: 2348872, 14: 2348872, 25: 2348900, 36: 2348928, 46: 2349346, 49: 2349374, 33683: 2387944, 33685: 2387943, 33698: 2396997, 33700:
[2025-10-12 09:38:04] 2025-10-12 13:27:54,448 | INFO     | --------------------------------------------------
[2025-10-12 09:38:04] 2025-10-12 13:27:54,448 | INFO     | 
[2025-10-12 09:38:04] 2025-10-12 13:27:54,448 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 09:38:04] 2025-10-12 13:27:55,459 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,460 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,460 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,462 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:38:04] 2025-10-12 13:27:55,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:38:04] 2025-10-12 13:27:55,463 | INFO     | job 6829685752 has completed (purged errors)
[2025-10-12 09:38:04] 2025-10-12 13:27:55,463 | INFO     | overall cleanup function is called
[2025-10-12 09:38:04] 2025-10-12 13:27:56,520 | INFO     | --- collectZombieJob: --- 10, [2070037]
[2025-10-12 09:38:04] 2025-10-12 13:27:56,521 | INFO     | zombie collector waiting for pid 2070037
[2025-10-12 09:38:04] 2025-10-12 13:27:56,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:38:04] 2025-10-12 13:27:56,521 | INFO     | collected zombie processes
[2025-10-12 09:38:04] 2025-10-12 13:27:56,521 | INFO     | will attempt to kill all subprocesses of pid=2070037
[2025-10-12 09:38:04] 2025-10-12 13:27:58,717 | INFO     | process IDs to be killed: [2070037] (in reverse order)
[2025-10-12 09:38:04] 2025-10-12 13:28:00,026 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:38:04] 2025-10-12 13:28:00,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:38:04] 2025-10-12 13:28:00,065 | INFO     | did not find any defunct processes belonging to 2070037
[2025-10-12 09:38:04] 2025-10-12 13:28:00,100 | INFO     | did not find any defunct processes belonging to 2070037
[2025-10-12 09:38:04] 2025-10-12 13:28:00,100 | INFO     | ready for new job
[2025-10-12 09:38:04] 2025-10-12 13:28:00,100 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:38:04] 2025-10-12 13:28:00,112 | INFO     | ***************************************
[2025-10-12 09:38:04] 2025-10-12 13:28:00,112 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 09:38:04] 2025-10-12 13:28:00,112 | INFO     | ***************************************
[2025-10-12 09:38:04] 2025-10-12 13:28:00,112 | INFO     | 
[2025-10-12 09:38:04] 2025-10-12 13:28:00,125 | INFO     | architecture information:
[2025-10-12 09:38:04] 2025-10-12 13:28:00,133 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:38:04] 2025-10-12 13:28:00,326 | INFO     | cat /etc/os-release:
[2025-10-12 09:38:04] NAME="CentOS Linux"
[2025-10-12 09:38:04] VERSION="7 (Core)"
[2025-10-12 09:38:04] ID="centos"
[2025-10-12 09:38:04] ID_LIKE="rhel fedora"
[2025-10-12 09:38:04] VERSION_ID="7"
[2025-10-12 09:38:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:38:04] ANSI_COLOR="0;31"
[2025-10-12 09:38:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:38:04] HOME_URL="https://www.centos.org/"
[2025-10-12 09:38:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:38:04] 
[2025-10-12 09:38:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:38:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:38:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:38:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:38:04] 
[2025-10-12 09:38:04] 2025-10-12 13:28:00,326 | INFO     | ***************************************
[2025-10-12 09:38:04] 2025-10-12 13:28:00,829 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 09:38:04] 2025-10-12 13:28:01,051 | INFO     | sufficient remaining disk space (63115886592 B)
[2025-10-12 09:38:04] 2025-10-12 13:28:01,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:38:04] 2025-10-12 13:28:01,052 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:38:04] 2025-10-12 13:28:01,052 | INFO     | update_server=False
[2025-10-12 09:38:04] 2025-10-12 13:28:01,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:38:04] 2025-10-12 13:28:01,154 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 09:38:04] 2025-10-12 13:28:01,155 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 09:38:04] 2025-10-12 13:28:01,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:38:04] 2025-10-12 13:28:01,155 | INFO     | will abort loop
[2025-10-12 09:38:04] 2025-10-12 13:28:01,422 | INFO     | all job control threads have been joined
[2025-10-12 09:38:04] 2025-10-12 13:28:01,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:38:04] 2025-10-12 13:28:02,006 | INFO     | all data control threads have been joined
[2025-10-12 09:38:04] 2025-10-12 13:28:02,058 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:02,142 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:02,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:02,162 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:02,426 | INFO     | all payload control threads have been joined
[2025-10-12 09:38:04] 2025-10-12 13:28:02,448 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:02,457 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:02,460 | INFO     | [job] control thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:02,498 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:02,588 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:02,756 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:03,033 | INFO     | [data] control thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:03,432 | INFO     | [payload] control thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:03,539 | INFO     | [job] validate thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:03,564 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:03,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:38:04] 2025-10-12 13:28:04,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:38:04] 2025-10-12 13:28:04,595 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:08,462 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:38:04] 2025-10-12 13:28:29,675 | INFO     | PID=2053883 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:38:04] 2025-10-12 13:28:29,675 | INFO     | .. there are 16 such processes running
[2025-10-12 09:38:04] 2025-10-12 13:28:29,676 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:38:04] 2025-10-12 13:28:29,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:38:04] 2025-10-12 13:28:29,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:38:04] 2025-10-12 13:28:59,048 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:38:04] 2025-10-12 13:28:59,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740843820864)>', '<ExcThread(monitor, started 139739889911552)>']
[2025-10-12 09:38:04] 2025-10-12 13:28:59,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:38:04] 2025-10-12 13:28:59,953 | INFO     | [monitor] control thread has ended
[2025-10-12 09:38:04] 2025-10-12 13:29:04,766 | INFO     | all workflow threads have been joined
[2025-10-12 09:38:04] 2025-10-12 13:29:04,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:38:04] 2025-10-12 13:29:04,767 | INFO     | traces error code: 0
[2025-10-12 09:38:04] 2025-10-12 13:29:04,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:38:04] 2025-10-12 13:29:07,177 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:38:04] 2025-10-12 13:29:07,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:38:04] 2025-10-12 13:29:07,284 [wrapper] pilotpid: 2053883
[2025-10-12 09:38:04] 2025-10-12 13:29:07,339 [wrapper] Pilot exit status: 0
[2025-10-12 09:38:04] 2025-10-12 13:29:07,527 [wrapper] pandaids: 6829685752
[2025-10-12 09:38:04] 2025-10-12 13:29:07,904 [wrapper] cleanup supervisor_pilot 2995552 2053884
[2025-10-12 09:38:04] 2025-10-12 13:29:07,985 [wrapper] Test setup, not cleaning
[2025-10-12 09:38:04] 2025-10-12 13:29:08,063 [wrapper] apfmon messages muted
[2025-10-12 09:38:04] 2025-10-12 13:29:08,151 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:38:04] 2025-10-12 13:29:08,208 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:38:04]  *** Error codes and diagnostics ***
[2025-10-12 09:38:04]     "exeErrorCode": 0,
[2025-10-12 09:38:04]     "exeErrorDiag": "",
[2025-10-12 09:38:04]     "pilotErrorCode": 0,
[2025-10-12 09:38:04]     "pilotErrorDiag": "",
[2025-10-12 09:38:04]  *** Listing of results directory ***
[2025-10-12 09:38:04] total 401976
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 08:41 pilot3.tar.gz
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 08:51 queuedata.json
[2025-10-12 09:38:04] -rwx------. 1 boincer umatlas     36292 Oct  4 08:51 runpilot2-wrapper.sh
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:38:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 09:38:04] -rw-r--r--. 2 boincer umatlas 212899537 Oct 12 00:01 EVNT.46376901._002164.pool.root.1
[2025-10-12 09:38:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 09:38:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 09:38:04] -rw-r--r--. 2 boincer umatlas    565600 Oct 12 00:01 input.tar.gz
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas      2519 Oct 12 00:02 pandaJob.out
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-12 09:38:04] drwx------. 4 boincer umatlas      4096 Oct 12 00:03 pilot3
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas 186057446 Oct 12 09:23 HITS.46376905._060128.pool.root.1
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas       531 Oct 12 09:23 boinc_task_state.xml
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas      1043 Oct 12 09:26 memory_monitor_summary.json
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas    726066 Oct 12 09:26 log.46376905._060128.job.log.tgz.1
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas      7833 Oct 12 09:27 heartbeat.json
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas        95 Oct 12 09:28 pilot_heartbeat.json
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas      5010 Oct 12 09:29 pilotlog.txt
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas   3659651 Oct 12 09:29 log.46376905._060128.job.log.1
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas       357 Oct 12 09:29 output.list
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:29 runtime_log
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas   4403200 Oct 12 09:29 result.tar.gz
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 09:29 runtime_log.err
[2025-10-12 09:38:04] -rw-------. 1 boincer umatlas       659 Oct 12 09:29 5eiLDmsuGP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRaDMDm8vIJtn.diag
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas      6613 Oct 12 09:30 init_data.xml
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:38 boinc_mmap_file
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:38 wrapper_checkpoint.txt
[2025-10-12 09:38:04] -rw-r--r--. 1 boincer umatlas     21119 Oct 12 09:38 stderr.txt
[2025-10-12 09:38:05] HITS file was successfully produced:
[2025-10-12 09:38:05] -rw-------. 1 boincer umatlas 186057446 Oct 12 09:23 shared/HITS.pool.root.1
[2025-10-12 09:38:05]  *** Contents of shared directory: ***
[2025-10-12 09:38:05] total 394492
[2025-10-12 09:38:05] -rw-r--r--. 2 boincer umatlas 212899537 Oct 12 00:01 ATLAS.root_0
[2025-10-12 09:38:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 09:38:05] -rw-r--r--. 2 boincer umatlas    565600 Oct 12 00:01 input.tar.gz
[2025-10-12 09:38:05] -rw-------. 1 boincer umatlas 186057446 Oct 12 09:23 HITS.pool.root.1
[2025-10-12 09:38:05] -rw-------. 1 boincer umatlas   4403200 Oct 12 09:29 result.tar.gz
09:38:06 (2043477): run_atlas exited; CPU time 58787.730573
09:38:06 (2043477): called boinc_finish(0)

</stderr_txt>
]]>

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