Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
18:07:45 (534503): wrapper (7.7.26015): starting
18:07:45 (534503): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 18:07:45] Arguments: --nthreads 4
[2025-10-11 18:07:45] Threads: 4
[2025-10-11 18:07:45] Checking for CVMFS
[2025-10-11 18:07:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:07:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:07:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:07:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:07:46] 2.11.5.0 2691367 3535 110124 151597 0 188 2960948 4096001 6454 130560 0 17352424 99.998 120296 2742 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 18:07:46] CVMFS is ok
[2025-10-11 18:07:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:07:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 18:07:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 18:07:46] Further information can be found at the LHC@home message board.
[2025-10-11 18:07:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:07:46] Checking for apptainer binary...
[2025-10-11 18:07:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:07:46] Running /usr/bin/apptainer --version
[2025-10-11 18:07:46] apptainer version 1.4.3
[2025-10-11 18:07:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:07:46] x32-linux3
[2025-10-11 18:07:46] apptainer works
[2025-10-11 18:07:46] Set ATHENA_PROC_NUMBER=4
[2025-10-11 18:07:46] Set ATHENA_CORE_NUMBER=4
[2025-10-11 18:07:46] Starting ATLAS job with PandaID=6838454912
[2025-10-11 18:07:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:10:12]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:10:12] 2025-10-12 00:09:05,387 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:10:12] 2025-10-12 00:09:05,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:10:12] 2025-10-12 00:09:05,389 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:10:12] 2025-10-12 00:09:05,389 | INFO     | sum of square deviations: 522502820.0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,390 | INFO     | sum of deviations: 12368563008.000002
[2025-10-11 20:10:12] 2025-10-12 00:09:05,390 | INFO     | mean x: 1760224097.0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,390 | INFO     | mean y: 2285524.4537815126
[2025-10-11 20:10:12] 2025-10-12 00:09:05,390 | INFO     | -- intersect: -41665322416.771126
[2025-10-11 20:10:12] 2025-10-12 00:09:05,390 | INFO     | intersect: -41665322416.771126
[2025-10-11 20:10:12] 2025-10-12 00:09:05,390 | INFO     | chi2: 1.0747119712182263
[2025-10-11 20:10:12] 2025-10-12 00:09:05,390 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 20:10:12] 2025-10-12 00:09:05,391 | INFO     | sum of deviations: 11769108962.499998
[2025-10-11 20:10:12] 2025-10-12 00:09:05,391 | INFO     | mean x: 1760223944.5
[2025-10-11 20:10:12] 2025-10-12 00:09:05,391 | INFO     | mean y: 2284075.6403508773
[2025-10-11 20:10:12] 2025-10-12 00:09:05,391 | INFO     | -- intersect: -45095162111.91771
[2025-10-11 20:10:12] 2025-10-12 00:09:05,391 | INFO     | intersect: -45095162111.91771
[2025-10-11 20:10:12] 2025-10-12 00:09:05,391 | INFO     | chi2: 1.0760428670114182
[2025-10-11 20:10:12] 2025-10-12 00:09:05,391 | INFO     | current chi2=1.0760428670114182 (change=-0.12383744006157105 %)
[2025-10-11 20:10:12] 2025-10-12 00:09:05,391 | INFO     | right removable region: 113
[2025-10-11 20:10:12] 2025-10-12 00:09:05,391 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 20:10:12] 2025-10-12 00:09:05,392 | INFO     | sum of deviations: 2193431473.0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,392 | INFO     | mean x: 1760224249.5
[2025-10-11 20:10:12] 2025-10-12 00:09:05,392 | INFO     | mean y: 2309366.50877193
[2025-10-11 20:10:12] 2025-10-12 00:09:05,392 | INFO     | -- intersect: -8402589872.234251
[2025-10-11 20:10:12] 2025-10-12 00:09:05,392 | INFO     | intersect: -8402589872.234251
[2025-10-11 20:10:12] 2025-10-12 00:09:05,392 | INFO     | chi2: 0.0005292785980959059
[2025-10-11 20:10:12] 2025-10-12 00:09:05,392 | INFO     | current chi2=0.0005292785980959059 (change=99.95075158626028 %)
[2025-10-11 20:10:12] 2025-10-12 00:09:05,392 | INFO     | sum of square deviations: 401533110.0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,393 | INFO     | sum of deviations: 1688934632.9999993
[2025-10-11 20:10:12] 2025-10-12 00:09:05,393 | INFO     | mean x: 1760224402.0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,393 | INFO     | mean y: 2310687.3944954127
[2025-10-11 20:10:12] 2025-10-12 00:09:05,393 | INFO     | -- intersect: -7401571782.9440365
[2025-10-11 20:10:12] 2025-10-12 00:09:05,393 | INFO     | intersect: -7401571782.9440365
[2025-10-11 20:10:12] 2025-10-12 00:09:05,393 | INFO     | chi2: 0.00026442873449307604
[2025-10-11 20:10:12] 2025-10-12 00:09:05,393 | INFO     | current chi2=0.00026442873449307604 (change=50.039783311782195 %)
[2025-10-11 20:10:12] 2025-10-12 00:09:05,393 | INFO     | sum of square deviations: 348769330.0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,394 | INFO     | sum of deviations: 1347796342.0000002
[2025-10-11 20:10:12] 2025-10-12 00:09:05,394 | INFO     | mean x: 1760224554.5
[2025-10-11 20:10:12] 2025-10-12 00:09:05,394 | INFO     | mean y: 2311674.8653846155
[2025-10-11 20:10:12] 2025-10-12 00:09:05,394 | INFO     | -- intersect: -6799961379.5160885
[2025-10-11 20:10:12] 2025-10-12 00:09:05,394 | INFO     | intersect: -6799961379.5160885
[2025-10-11 20:10:12] 2025-10-12 00:09:05,394 | INFO     | chi2: 0.00020455733475880882
[2025-10-11 20:10:12] 2025-10-12 00:09:05,394 | INFO     | current chi2=0.00020455733475880882 (change=22.64179036708846 %)
[2025-10-11 20:10:12] 2025-10-12 00:09:05,394 | INFO     | left removable region: 30
[2025-10-11 20:10:12] 2025-10-12 00:09:05,394 | INFO     | sum of square deviations: 177275882.0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,395 | INFO     | sum of deviations: 560225891.0000001
[2025-10-11 20:10:12] 2025-10-12 00:09:05,395 | INFO     | mean x: 1760224829.0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,395 | INFO     | mean y: 2313833.0963855423
[2025-10-11 20:10:12] 2025-10-12 00:09:05,395 | INFO     | -- intersect: -5560335254.086538
[2025-10-11 20:10:12] 2025-10-12 00:09:05,395 | INFO     | intersect: -5560335254.086538
[2025-10-11 20:10:12] 2025-10-12 00:09:05,395 | INFO     | chi2: 5.764066423956485e-05
[2025-10-11 20:10:12] 2025-10-12 00:09:05,395 | INFO     | -- intersect: -5560335254.086538
[2025-10-11 20:10:12] 2025-10-12 00:09:05,395 | INFO     | current memory leak: 3.16 B/s (using 83 data points, chi2=0.00)
[2025-10-11 20:10:12] 2025-10-12 00:09:05,395 | INFO     | could have reported an average CPU frequency of 3893 MHz (7 samples)
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | ..............................
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | . Timing measurements:
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | . get job = 0 s
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | . initial setup = 2 s
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | . payload setup = 4 s
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | . stage-in = 0 s
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | . payload execution = 7239 s
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | . stage-out = 0 s
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | . log creation = 0 s
[2025-10-11 20:10:12] 2025-10-12 00:09:05,396 | INFO     | ..............................
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | 
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | job summary report
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | --------------------------------------------------
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | PanDA job id: 6838454912
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | task id: 46676269
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | errors: (none)
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | pilot state: finished 
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | transexitcode: 0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,461 | INFO     | exeerrorcode: 0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | exeerrordiag: 
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | exitcode: 0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | exitmsg: OK
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | cpuconsumptiontime: 28066 s
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | nevents: 400
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | neventsw: 0
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | pid: 544990
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | pgrp: 544990
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | corecount: 4
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | event service: False
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 7246: 2376536, 7247: 2385548, 7250: 2385604, 7257: 2385926}
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | --------------------------------------------------
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | 
[2025-10-11 20:10:12] 2025-10-12 00:09:05,462 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-11 20:10:12] 2025-10-12 00:09:05,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:10:12] 2025-10-12 00:09:05,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:10:12] 2025-10-12 00:09:05,480 | INFO     | job 6838454912 has completed (purged errors)
[2025-10-11 20:10:12] 2025-10-12 00:09:05,480 | INFO     | overall cleanup function is called
[2025-10-11 20:10:12] 2025-10-12 00:09:06,484 | INFO     | --- collectZombieJob: --- 10, [544990]
[2025-10-11 20:10:12] 2025-10-12 00:09:06,484 | INFO     | zombie collector waiting for pid 544990
[2025-10-11 20:10:12] 2025-10-12 00:09:06,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:10:12] 2025-10-12 00:09:06,484 | INFO     | collected zombie processes
[2025-10-11 20:10:12] 2025-10-12 00:09:06,484 | INFO     | will attempt to kill all subprocesses of pid=544990
[2025-10-11 20:10:12] 2025-10-12 00:09:06,621 | INFO     | process IDs to be killed: [544990] (in reverse order)
[2025-10-11 20:10:12] 2025-10-12 00:09:06,673 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:10:12] 2025-10-12 00:09:06,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:10:12] 2025-10-12 00:09:06,677 | INFO     | did not find any defunct processes belonging to 544990
[2025-10-11 20:10:12] 2025-10-12 00:09:06,681 | INFO     | did not find any defunct processes belonging to 544990
[2025-10-11 20:10:12] 2025-10-12 00:09:06,681 | INFO     | ready for new job
[2025-10-11 20:10:12] 2025-10-12 00:09:06,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:10:12] 2025-10-12 00:09:06,683 | INFO     | ***************************************
[2025-10-11 20:10:12] 2025-10-12 00:09:06,683 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:10:12] 2025-10-12 00:09:06,683 | INFO     | ***************************************
[2025-10-11 20:10:12] 2025-10-12 00:09:06,683 | INFO     | 
[2025-10-11 20:10:12] 2025-10-12 00:09:06,702 | INFO     | architecture information:
[2025-10-11 20:10:12] 2025-10-12 00:09:06,702 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:10:12] 2025-10-12 00:09:06,714 | INFO     | cat /etc/os-release:
[2025-10-11 20:10:12] NAME="CentOS Linux"
[2025-10-11 20:10:12] VERSION="7 (Core)"
[2025-10-11 20:10:12] ID="centos"
[2025-10-11 20:10:12] ID_LIKE="rhel fedora"
[2025-10-11 20:10:12] VERSION_ID="7"
[2025-10-11 20:10:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:10:12] ANSI_COLOR="0;31"
[2025-10-11 20:10:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:10:12] HOME_URL="https://www.centos.org/"
[2025-10-11 20:10:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:10:12] 
[2025-10-11 20:10:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:10:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:10:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:10:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:10:12] 
[2025-10-11 20:10:12] 2025-10-12 00:09:06,714 | INFO     | ***************************************
[2025-10-11 20:10:12] 2025-10-12 00:09:07,216 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-11 20:10:12] 2025-10-12 00:09:07,228 | INFO     | sufficient remaining disk space (396252676096 B)
[2025-10-11 20:10:12] 2025-10-12 00:09:07,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:10:12] 2025-10-12 00:09:07,228 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:10:12] 2025-10-12 00:09:07,228 | INFO     | update_server=False
[2025-10-11 20:10:12] 2025-10-12 00:09:07,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:10:12] 2025-10-12 00:09:07,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:10:12] 2025-10-12 00:09:07,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:10:12] 2025-10-12 00:09:07,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:10:12] 2025-10-12 00:09:07,740 | INFO     | aborting loop
[2025-10-11 20:10:12] 2025-10-12 00:09:07,832 | INFO     | all data control threads have been joined
[2025-10-11 20:10:12] 2025-10-12 00:09:08,115 | INFO     | all job control threads have been joined
[2025-10-11 20:10:12] 2025-10-12 00:09:08,232 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:08,232 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:08,491 | INFO     | all payload control threads have been joined
[2025-10-11 20:10:12] 2025-10-12 00:09:08,744 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:08,832 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:08,837 | INFO     | [data] control thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:08,846 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:08,952 | INFO     | [job] validate thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:09,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:10:12] 2025-10-12 00:09:09,120 | INFO     | [job] control thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:09,234 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:09,293 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:09,293 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:09,496 | INFO     | [payload] control thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:09,497 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:09,672 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:13,072 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:18,072 | INFO     | job.realtimelogging is not enabled
[2025-10-11 20:10:12] 2025-10-12 00:09:19,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:10:12] 2025-10-12 00:09:36,909 | INFO     | PID=538340 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 20:10:12] 2025-10-12 00:09:36,909 | INFO     | .. there are 8 such processes running
[2025-10-11 20:10:12] 2025-10-12 00:09:36,909 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:10:12] 2025-10-12 00:09:36,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:10:12] 2025-10-12 00:09:36,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:10:12] 2025-10-12 00:10:06,304 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:10:12] 2025-10-12 00:10:07,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140292700133184)>', '<ExcThread(monitor, started 140292262971136)>']
[2025-10-11 20:10:12] 2025-10-12 00:10:08,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:10:12] 2025-10-12 00:10:08,040 | INFO     | [monitor] control thread has ended
[2025-10-11 20:10:12] 2025-10-12 00:10:12,376 | INFO     | all workflow threads have been joined
[2025-10-11 20:10:12] 2025-10-12 00:10:12,376 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:10:12] 2025-10-12 00:10:12,376 | INFO     | traces error code: 0
[2025-10-11 20:10:12] 2025-10-12 00:10:12,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:10:12] 2025-10-12 00:10:12,461 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:10:12] 2025-10-12 00:10:12,463 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:10:12] 2025-10-12 00:10:12,465 [wrapper] pilotpid: 538340
[2025-10-11 20:10:12] 2025-10-12 00:10:12,467 [wrapper] Pilot exit status: 0
[2025-10-11 20:10:12] 2025-10-12 00:10:12,473 [wrapper] pandaids: 6838454912
[2025-10-11 20:10:12] 2025-10-12 00:10:12,507 [wrapper] cleanup supervisor_pilot  749361 538341
[2025-10-11 20:10:12] 2025-10-12 00:10:12,509 [wrapper] Test setup, not cleaning
[2025-10-11 20:10:12] 2025-10-12 00:10:12,512 [wrapper] apfmon messages muted
[2025-10-11 20:10:12] 2025-10-12 00:10:12,514 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:10:12] 2025-10-12 00:10:12,516 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:10:12]  *** Error codes and diagnostics ***
[2025-10-11 20:10:12]     "exeErrorCode": 0,
[2025-10-11 20:10:12]     "exeErrorDiag": "",
[2025-10-11 20:10:12]     "pilotErrorCode": 0,
[2025-10-11 20:10:12]     "pilotErrorDiag": "",
[2025-10-11 20:10:12]  *** Listing of results directory ***
[2025-10-11 20:10:12] total 411776
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-11 20:10:12] -rwx------ 1 boinc boinc     36292 Oct 11 10:51 runpilot2-wrapper.sh
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc      5112 Oct 11 10:51 queuedata.json
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc       100 Oct 11 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:10:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 18:07 run_atlas
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc       105 Oct 11 18:07 job.xml
[2025-10-11 20:10:12] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:07 start_atlas.sh
[2025-10-11 20:10:12] drwxrwx--x 2 boinc boinc      4096 Oct 11 18:07 shared
[2025-10-11 20:10:12] -rw-r--r-- 2 boinc boinc    569676 Oct 11 18:07 input.tar.gz
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc      9157 Oct 11 18:07 init_data.xml
[2025-10-11 20:10:12] -rw-r--r-- 2 boinc boinc 222278424 Oct 11 18:07 EVNT.46676267._002407.pool.root.1
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:07 boinc_setup_complete
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:07 boinc_lockfile
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc      2546 Oct 11 18:07 pandaJob.out
[2025-10-11 20:10:12] -rw------- 1 boinc boinc    975528 Oct 11 18:07 agis_schedconf.cvmfs.json
[2025-10-11 20:10:12] -rw------- 1 boinc boinc   1560580 Oct 11 18:07 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:10:12] drwx------ 5 boinc boinc      4096 Oct 11 18:07 pilot3
[2025-10-11 20:10:12] -rw------- 1 boinc boinc 192803301 Oct 11 20:08 HITS.46676269._059598.pool.root.1
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc       530 Oct 11 20:08 boinc_task_state.xml
[2025-10-11 20:10:12] -rw------- 1 boinc boinc        95 Oct 11 20:08 pilot_heartbeat.json
[2025-10-11 20:10:12] -rw------- 1 boinc boinc      1025 Oct 11 20:08 memory_monitor_summary.json
[2025-10-11 20:10:12] -rw------- 1 boinc boinc    284484 Oct 11 20:08 log.46676269._059598.job.log.tgz.1
[2025-10-11 20:10:12] -rw------- 1 boinc boinc      7742 Oct 11 20:09 heartbeat.json
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc        27 Oct 11 20:10 wrapper_checkpoint.txt
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc      8192 Oct 11 20:10 boinc_mmap_file
[2025-10-11 20:10:12] -rw------- 1 boinc boinc      4902 Oct 11 20:10 pilotlog.txt
[2025-10-11 20:10:12] -rw------- 1 boinc boinc   1047330 Oct 11 20:10 log.46676269._059598.job.log.1
[2025-10-11 20:10:12] -rw------- 1 boinc boinc       357 Oct 11 20:10 output.list
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc       620 Oct 11 20:10 runtime_log
[2025-10-11 20:10:12] -rw------- 1 boinc boinc   1351680 Oct 11 20:10 result.tar.gz
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc      8764 Oct 11 20:10 runtime_log.err
[2025-10-11 20:10:12] -rw------- 1 boinc boinc       644 Oct 11 20:10 ngcMDmx7pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmp5RMDmIDbpgm.diag
[2025-10-11 20:10:12] -rw-r--r-- 1 boinc boinc     20972 Oct 11 20:10 stderr.txt
[2025-10-11 20:10:12] HITS file was successfully produced:
[2025-10-11 20:10:12] -rw------- 1 boinc boinc 192803301 Oct 11 20:08 shared/HITS.pool.root.1
[2025-10-11 20:10:12]  *** Contents of shared directory: ***
[2025-10-11 20:10:12] total 407264
[2025-10-11 20:10:12] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:07 start_atlas.sh
[2025-10-11 20:10:12] -rw-r--r-- 2 boinc boinc    569676 Oct 11 18:07 input.tar.gz
[2025-10-11 20:10:12] -rw-r--r-- 2 boinc boinc 222278424 Oct 11 18:07 ATLAS.root_0
[2025-10-11 20:10:12] -rw------- 1 boinc boinc 192803301 Oct 11 20:08 HITS.pool.root.1
[2025-10-11 20:10:12] -rw------- 1 boinc boinc   1351680 Oct 11 20:10 result.tar.gz
20:10:14 (534503): run_atlas exited; CPU time 28143.314453
20:10:14 (534503): called boinc_finish(0)

</stderr_txt>
]]>

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