Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:41:16 (738389): wrapper (7.7.26015): starting
00:41:16 (738389): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 00:41:16] Arguments: --nthreads 4
[2025-10-13 00:41:16] Threads: 4
[2025-10-13 00:41:16] Checking for CVMFS
[2025-10-13 00:41:16] No cvmfs_config command found, will try listing directly
[2025-10-13 00:41:16] CVMFS is ok
[2025-10-13 00:41:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:41:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:41:16] Further information can be found at the LHC@home message board.
[2025-10-13 00:41:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:41:16] Checking for apptainer binary...
[2025-10-13 00:41:16] which: no apptainer in ((null))
[2025-10-13 00:41:16] apptainer is not installed, using version from CVMFS
[2025-10-13 00:41:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:41:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-10-13 00:41:16] apptainer works
[2025-10-13 00:41:16] Set ATHENA_PROC_NUMBER=4
[2025-10-13 00:41:16] Set ATHENA_CORE_NUMBER=4
[2025-10-13 00:41:16] Starting ATLAS job with PandaID=6838454796
[2025-10-13 00:41:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:22:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:22:11] 2025-10-13 01:12:26,695 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2728.214875
[2025-10-13 03:22:11] 2025-10-13 01:12:26,719 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6838454796/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:22:11] 2025-10-13 01:12:26,719 | INFO     | extracted standard info from prmon json
[2025-10-13 03:22:11] 2025-10-13 01:12:26,720 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:22:11] 2025-10-13 01:12:26,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:22:11] 2025-10-13 01:12:26,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:22:11] 2025-10-13 01:12:26,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:22:11] 2025-10-13 01:12:26,723 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:22:11] 2025-10-13 01:12:26,723 | INFO     | sum of square deviations: 1005179777.0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,724 | INFO     | sum of deviations: 13150666364.5
[2025-10-13 03:22:11] 2025-10-13 01:12:26,724 | INFO     | mean x: 1760313407.5
[2025-10-13 03:22:11] 2025-10-13 01:12:26,724 | INFO     | mean y: 2313201.9121621624
[2025-10-13 03:22:11] 2025-10-13 01:12:26,724 | INFO     | -- intersect: -23027690831.872364
[2025-10-13 03:22:11] 2025-10-13 01:12:26,724 | INFO     | intersect: -23027690831.872364
[2025-10-13 03:22:11] 2025-10-13 01:12:26,725 | INFO     | chi2: 1.2247178534436096
[2025-10-13 03:22:11] 2025-10-13 01:12:26,725 | INFO     | sum of square deviations: 906703512.0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,726 | INFO     | sum of deviations: 12658694990.0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,726 | INFO     | mean x: 1760313255.0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,726 | INFO     | mean y: 2312439.965034965
[2025-10-13 03:22:11] 2025-10-13 01:12:26,726 | INFO     | -- intersect: -24573823294.578247
[2025-10-13 03:22:11] 2025-10-13 01:12:26,726 | INFO     | intersect: -24573823294.578247
[2025-10-13 03:22:11] 2025-10-13 01:12:26,726 | INFO     | chi2: 1.2259570048437138
[2025-10-13 03:22:11] 2025-10-13 01:12:26,727 | INFO     | current chi2=1.2259570048437138 (change=-0.10117852014813274 %)
[2025-10-13 03:22:11] 2025-10-13 01:12:26,727 | INFO     | right removable region: 142
[2025-10-13 03:22:11] 2025-10-13 01:12:26,727 | INFO     | sum of square deviations: 906703512.0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,728 | INFO     | sum of deviations: -4227064601.0000005
[2025-10-13 03:22:11] 2025-10-13 01:12:26,728 | INFO     | mean x: 1760313560.0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,728 | INFO     | mean y: 2339638.4055944057
[2025-10-13 03:22:11] 2025-10-13 01:12:26,728 | INFO     | -- intersect: 8208946360.070406
[2025-10-13 03:22:11] 2025-10-13 01:12:26,728 | INFO     | intersect: 8208946360.070406
[2025-10-13 03:22:11] 2025-10-13 01:12:26,728 | INFO     | chi2: 0.008126631397888481
[2025-10-13 03:22:11] 2025-10-13 01:12:26,728 | INFO     | current chi2=0.008126631397888481 (change=99.33644868693321 %)
[2025-10-13 03:22:11] 2025-10-13 01:12:26,729 | INFO     | sum of square deviations: 814878534.5
[2025-10-13 03:22:11] 2025-10-13 01:12:26,729 | INFO     | sum of deviations: -4010302717.5
[2025-10-13 03:22:11] 2025-10-13 01:12:26,730 | INFO     | mean x: 1760313712.5
[2025-10-13 03:22:11] 2025-10-13 01:12:26,730 | INFO     | mean y: 2339268.34057971
[2025-10-13 03:22:11] 2025-10-13 01:12:26,730 | INFO     | -- intersect: 8665459679.559689
[2025-10-13 03:22:11] 2025-10-13 01:12:26,733 | INFO     | intersect: 8665459679.559689
[2025-10-13 03:22:11] 2025-10-13 01:12:26,733 | INFO     | chi2: 0.00783926428135917
[2025-10-13 03:22:11] 2025-10-13 01:12:26,733 | INFO     | current chi2=0.00783926428135917 (change=3.5361160419306876 %)
[2025-10-13 03:22:11] 2025-10-13 01:12:26,733 | INFO     | left removable region: 20
[2025-10-13 03:22:11] 2025-10-13 01:12:26,734 | INFO     | sum of square deviations: 563026370.5
[2025-10-13 03:22:11] 2025-10-13 01:12:26,734 | INFO     | sum of deviations: -2250819785.0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,734 | INFO     | mean x: 1760313834.5
[2025-10-13 03:22:11] 2025-10-13 01:12:26,734 | INFO     | mean y: 2336117.3606557376
[2025-10-13 03:22:11] 2025-10-13 01:12:26,735 | INFO     | -- intersect: 7039571696.545336
[2025-10-13 03:22:11] 2025-10-13 01:12:26,735 | INFO     | intersect: 7039571696.545336
[2025-10-13 03:22:11] 2025-10-13 01:12:26,735 | INFO     | chi2: 0.006401318450865039
[2025-10-13 03:22:11] 2025-10-13 01:12:26,735 | INFO     | -- intersect: 7039571696.545336
[2025-10-13 03:22:11] 2025-10-13 01:12:26,735 | INFO     | current memory leak: -4.00 B/s (using 122 data points, chi2=0.01)
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | could have reported an average CPU frequency of 2731 MHz (8 samples)
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | ..............................
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | . Timing measurements:
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | . get job = 0 s
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | . initial setup = 1 s
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | . payload setup = 9 s
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | . stage-in = 0 s
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | . payload execution = 9014 s
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | . stage-out = 0 s
[2025-10-13 03:22:11] 2025-10-13 01:12:26,736 | INFO     | . log creation = 0 s
[2025-10-13 03:22:11] 2025-10-13 01:12:26,737 | INFO     | ..............................
[2025-10-13 03:22:11] 2025-10-13 01:12:26,830 | INFO     | 
[2025-10-13 03:22:11] 2025-10-13 01:12:26,831 | INFO     | job summary report
[2025-10-13 03:22:11] 2025-10-13 01:12:26,831 | INFO     | --------------------------------------------------
[2025-10-13 03:22:11] 2025-10-13 01:12:26,831 | INFO     | PanDA job id: 6838454796
[2025-10-13 03:22:11] 2025-10-13 01:12:26,831 | INFO     | task id: 46676269
[2025-10-13 03:22:11] 2025-10-13 01:12:26,831 | INFO     | errors: (none)
[2025-10-13 03:22:11] 2025-10-13 01:12:26,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:22:11] 2025-10-13 01:12:26,831 | INFO     | pilot state: finished 
[2025-10-13 03:22:11] 2025-10-13 01:12:26,831 | INFO     | transexitcode: 0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,831 | INFO     | exeerrorcode: 0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | exeerrordiag: 
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | exitcode: 0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | exitmsg: OK
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | cpuconsumptiontime: 34329 s
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | nevents: 400
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | neventsw: 0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | pid: 804294
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | pgrp: 804294
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | corecount: 4
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | event service: False
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | sizes: {0: 2348698, 1: 2348897, 7: 2349159, 12: 2349187, 9024: 2377746, 9026: 2386768, 9029: 2386952, 9039: 2387146}
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | --------------------------------------------------
[2025-10-13 03:22:11] 2025-10-13 01:12:26,832 | INFO     | 
[2025-10-13 03:22:11] 2025-10-13 01:12:26,833 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-10-13 03:22:11] 2025-10-13 01:12:26,859 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,861 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,861 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:22:11] 2025-10-13 01:12:26,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,862 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:22:11] 2025-10-13 01:12:26,862 | INFO     | job 6838454796 has completed (purged errors)
[2025-10-13 03:22:11] 2025-10-13 01:12:26,862 | INFO     | overall cleanup function is called
[2025-10-13 03:22:11] 2025-10-13 01:12:27,870 | INFO     | --- collectZombieJob: --- 10, [804294]
[2025-10-13 03:22:11] 2025-10-13 01:12:27,871 | INFO     | zombie collector waiting for pid 804294
[2025-10-13 03:22:11] 2025-10-13 01:12:27,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:22:11] 2025-10-13 01:12:27,871 | INFO     | collected zombie processes
[2025-10-13 03:22:11] 2025-10-13 01:12:27,871 | INFO     | will attempt to kill all subprocesses of pid=804294
[2025-10-13 03:22:11] 2025-10-13 01:12:28,649 | INFO     | process IDs to be killed: [804294] (in reverse order)
[2025-10-13 03:22:11] 2025-10-13 01:12:28,897 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:22:11] 2025-10-13 01:12:28,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:22:11] 2025-10-13 01:12:28,929 | INFO     | did not find any defunct processes belonging to 804294
[2025-10-13 03:22:11] 2025-10-13 01:12:28,960 | INFO     | did not find any defunct processes belonging to 804294
[2025-10-13 03:22:11] 2025-10-13 01:12:28,960 | INFO     | ready for new job
[2025-10-13 03:22:11] 2025-10-13 01:12:28,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:22:11] 2025-10-13 01:12:28,962 | INFO     | ***************************************
[2025-10-13 03:22:11] 2025-10-13 01:12:28,963 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:22:11] 2025-10-13 01:12:28,963 | INFO     | ***************************************
[2025-10-13 03:22:11] 2025-10-13 01:12:28,963 | INFO     | 
[2025-10-13 03:22:11] 2025-10-13 01:12:28,971 | INFO     | architecture information:
[2025-10-13 03:22:11] 2025-10-13 01:12:28,971 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:22:11] 2025-10-13 01:12:28,992 | INFO     | cat /etc/os-release:
[2025-10-13 03:22:11] NAME="CentOS Linux"
[2025-10-13 03:22:11] VERSION="7 (Core)"
[2025-10-13 03:22:11] ID="centos"
[2025-10-13 03:22:11] ID_LIKE="rhel fedora"
[2025-10-13 03:22:11] VERSION_ID="7"
[2025-10-13 03:22:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:22:11] ANSI_COLOR="0;31"
[2025-10-13 03:22:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:22:11] HOME_URL="https://www.centos.org/"
[2025-10-13 03:22:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:22:11] 
[2025-10-13 03:22:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:22:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:22:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:22:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:22:11] 
[2025-10-13 03:22:11] 2025-10-13 01:12:28,992 | INFO     | ***************************************
[2025-10-13 03:22:11] 2025-10-13 01:12:29,495 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-10-13 03:22:11] 2025-10-13 01:12:29,521 | INFO     | sufficient remaining disk space (3335150108672 B)
[2025-10-13 03:22:11] 2025-10-13 01:12:29,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:22:11] 2025-10-13 01:12:29,522 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:22:11] 2025-10-13 01:12:29,522 | INFO     | update_server=False
[2025-10-13 03:22:11] 2025-10-13 01:12:29,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:22:11] 2025-10-13 01:12:29,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:22:11] 2025-10-13 01:12:29,740 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 03:22:11] 2025-10-13 01:12:29,740 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 03:22:11] 2025-10-13 01:12:29,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:22:11] 2025-10-13 01:12:29,740 | INFO     | will abort loop
[2025-10-13 03:22:11] 2025-10-13 01:12:29,830 | INFO     | all payload control threads have been joined
[2025-10-13 03:22:11] 2025-10-13 01:12:30,111 | INFO     | all data control threads have been joined
[2025-10-13 03:22:11] 2025-10-13 01:12:30,528 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:30,529 | INFO     | all job control threads have been joined
[2025-10-13 03:22:11] 2025-10-13 01:12:30,741 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:30,794 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:30,835 | INFO     | [payload] control thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:30,889 | INFO     | [job] validate thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:30,891 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:31,096 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:31,116 | INFO     | [data] control thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:31,367 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:31,534 | INFO     | [job] control thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:31,543 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:31,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:22:11] 2025-10-13 01:12:31,829 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:31,840 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:22:11] 2025-10-13 01:12:32,109 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:32,845 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:35,781 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:39,727 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:22:11] 2025-10-13 01:12:40,728 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:22:11] 2025-10-13 01:12:43,637 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:22:11] 2025-10-13 01:12:44,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22383466186560)>', '<ExcThread(monitor, started 22382752298752)>']
[2025-10-13 03:22:11] 2025-10-13 01:12:49,607 | INFO     | all workflow threads have been joined
[2025-10-13 03:22:11] 2025-10-13 01:12:49,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:22:11] 2025-10-13 01:12:49,608 | INFO     | traces error code: 0
[2025-10-13 03:22:11] 2025-10-13 01:12:49,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:22:11] 2025-10-13 01:12:59,812 | INFO     | PID=754840 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 03:22:11] 2025-10-13 01:12:59,812 | INFO     | .. there are 10 such processes running
[2025-10-13 03:22:11] 2025-10-13 01:12:59,813 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:22:11] 2025-10-13 01:12:59,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:22:11] 2025-10-13 01:12:59,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:22:11] 2025-10-13 01:12:59,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:22:11] 2025-10-13 01:12:59,814 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 03:22:11] 2025-10-13 01:12:59,814 | INFO     | [monitor] control thread has ended
[2025-10-13 03:22:11] 2025-10-13 01:12:59,952 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:22:11] 2025-10-13 01:12:59,956 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:22:11] 2025-10-13 01:12:59,960 [wrapper] pilotpid: 754840
[2025-10-13 03:22:11] 2025-10-13 01:12:59,963 [wrapper] Pilot exit status: 0
[2025-10-13 03:22:11] 2025-10-13 01:12:59,978 [wrapper] pandaids: 6838454796
[2025-10-13 03:22:11] 2025-10-13 01:13:00,150 [wrapper] cleanup supervisor_pilot 1120690 754842
[2025-10-13 03:22:11] 2025-10-13 01:13:00,154 [wrapper] Test setup, not cleaning
[2025-10-13 03:22:11] 2025-10-13 01:13:00,158 [wrapper] apfmon messages muted
[2025-10-13 03:22:11] 2025-10-13 01:13:00,162 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:22:11] 2025-10-13 01:13:00,166 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:22:11]  *** Error codes and diagnostics ***
[2025-10-13 03:22:11]     "exeErrorCode": 0,
[2025-10-13 03:22:11]     "exeErrorDiag": "",
[2025-10-13 03:22:11]     "pilotErrorCode": 0,
[2025-10-13 03:22:11]     "pilotErrorDiag": "",
[2025-10-13 03:22:11]  *** Listing of results directory ***
[2025-10-13 03:22:11] total 415396
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:01 pilot3.tar.gz
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc      5112 Oct 11 16:50 queuedata.json
[2025-10-13 03:22:11] -rwx------ 1 boinc boinc     36292 Oct 11 16:50 runpilot2-wrapper.sh
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:22:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:41 run_atlas
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:41 job.xml
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc      6688 Oct 13 00:41 init_data.xml
[2025-10-13 03:22:11] -rw-r--r-- 2 boinc boinc 222181755 Oct 13 00:41 EVNT.46676267._002400.pool.root.1
[2025-10-13 03:22:11] drwxrwx--x 2 boinc boinc      4096 Oct 13 00:41 shared
[2025-10-13 03:22:11] -rw-r--r-- 2 boinc boinc    569682 Oct 13 00:41 input.tar.gz
[2025-10-13 03:22:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:41 start_atlas.sh
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:41 boinc_lockfile
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc      2550 Oct 13 00:41 pandaJob.out
[2025-10-13 03:22:11] -rw------- 1 boinc boinc    975603 Oct 13 00:41 agis_schedconf.cvmfs.json
[2025-10-13 03:22:11] -rw------- 1 boinc boinc   1560580 Oct 13 00:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:22:11] drwx------ 5 boinc boinc      4096 Oct 13 00:41 pilot3
[2025-10-13 03:22:11] -rw------- 1 boinc boinc 196084482 Oct 13 03:11 HITS.46676269._059482.pool.root.1
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc       528 Oct 13 03:12 boinc_task_state.xml
[2025-10-13 03:22:11] -rw------- 1 boinc boinc      1039 Oct 13 03:12 memory_monitor_summary.json
[2025-10-13 03:22:11] -rw------- 1 boinc boinc    324521 Oct 13 03:12 log.46676269._059482.job.log.tgz.1
[2025-10-13 03:22:11] -rw------- 1 boinc boinc      7779 Oct 13 03:12 heartbeat.json
[2025-10-13 03:22:11] -rw------- 1 boinc boinc        95 Oct 13 03:12 pilot_heartbeat.json
[2025-10-13 03:22:11] -rw------- 1 boinc boinc       892 Oct 13 03:12 pilotlog.txt
[2025-10-13 03:22:11] -rw------- 1 boinc boinc   1273243 Oct 13 03:13 log.46676269._059482.job.log.1
[2025-10-13 03:22:11] -rw------- 1 boinc boinc       357 Oct 13 03:13 output.list
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:13 runtime_log
[2025-10-13 03:22:11] -rw------- 1 boinc boinc   1617920 Oct 13 03:13 result.tar.gz
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc      9084 Oct 13 03:13 runtime_log.err
[2025-10-13 03:22:11] -rw------- 1 boinc boinc       662 Oct 13 03:13 kvJNDmw6pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmw4RMDmscXBFo.diag
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc        26 Oct 13 03:22 wrapper_checkpoint.txt
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:22 boinc_mmap_file
[2025-10-13 03:22:11] -rw-r--r-- 1 boinc boinc     20846 Oct 13 03:22 stderr.txt
[2025-10-13 03:22:11] HITS file was successfully produced:
[2025-10-13 03:22:11] -rw------- 1 boinc boinc 196084482 Oct 13 03:11 shared/HITS.pool.root.1
[2025-10-13 03:22:11]  *** Contents of shared directory: ***
[2025-10-13 03:22:11] total 410632
[2025-10-13 03:22:11] -rw-r--r-- 2 boinc boinc 222181755 Oct 13 00:41 ATLAS.root_0
[2025-10-13 03:22:11] -rw-r--r-- 2 boinc boinc    569682 Oct 13 00:41 input.tar.gz
[2025-10-13 03:22:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:41 start_atlas.sh
[2025-10-13 03:22:11] -rw------- 1 boinc boinc 196084482 Oct 13 03:11 HITS.pool.root.1
[2025-10-13 03:22:11] -rw------- 1 boinc boinc   1617920 Oct 13 03:13 result.tar.gz
03:22:12 (738389): run_atlas exited; CPU time 34936.342880
03:22:12 (738389): called boinc_finish(0)

</stderr_txt>
]]>

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